RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 IGKV2-24A0A0C4DH68 120 aa5.36□□□□□ -1.55
PSEN1-209ENST00000553855 A4D1N5 150 aa5.36□□□□□ -1.55
PSEN1-209ENST00000553855 IGIPA6NJ69 53 aa5.36□□□□□ -1.55
PSEN1-209ENST00000553855 NDUFA1O15239 70 aa5.36□□□□□ -1.55
PSEN1-209ENST00000553855 HBDP02042 147 aa5.36□□□□□ -1.55
PSEN1-209ENST00000553855 UBE2D1P51668 147 aa5.36□□□□□ -1.55
PSEN1-209ENST00000553855 COX6A2Q02221 97 aa5.36□□□□□ -1.55
PSEN1-209ENST00000553855 UBE2V1Q13404 147 aa5.36□□□□□ -1.55
PSEN1-209ENST00000553855 MAJINQ3KP22 176 aa5.36□□□□□ -1.55
PSEN1-209ENST00000553855 LINC00242Q5T6M2 205 aa5.36□□□□□ -1.55
PSEN1-209ENST00000553855 CBLN2Q8IUK8 224 aa5.36□□□□□ -1.55
PSEN1-209ENST00000553855 CIRBP-AS1Q8TBR5 109 aa5.36□□□□□ -1.55
PSEN1-209ENST00000553855 LINC00526Q96FQ7 95 aa5.36□□□□□ -1.55
PSEN1-209ENST00000553855 AMELXQ99217 191 aa5.36□□□□□ -1.55
PSEN1-209ENST00000553855 A0A087WZ39 114 aa5.35□□□□□ -1.55
PSEN1-209ENST00000553855 LOC107984640A0A0U1RRK4 108 aa5.35□□□□□ -1.55
PSEN1-209ENST00000553855 LINC01546A6NGU7 62 aa5.35□□□□□ -1.55
PSEN1-209ENST00000553855 SLPIP03973 132 aa5.35□□□□□ -1.55
PSEN1-209ENST00000553855 NDUFA6P56556 154 aa5.35□□□□□ -1.55
PSEN1-209ENST00000553855 GAGE2BQ13066 116 aa5.35□□□□□ -1.55
PSEN1-209ENST00000553855 GAGE2EQ4V326 116 aa5.35□□□□□ -1.55
PSEN1-209ENST00000553855 GAGE2AQ6NT46 116 aa5.35□□□□□ -1.55
PSEN1-209ENST00000553855 BAGE3Q86Y29 109 aa5.35□□□□□ -1.55
PSEN1-209ENST00000553855 LINC01561Q8N1V8 128 aa5.35□□□□□ -1.55
PSEN1-209ENST00000553855 C18orf32Q8TCD1 76 aa5.35□□□□□ -1.55
PSEN1-209ENST00000553855 C7orf33Q8WU49 177 aa5.35□□□□□ -1.55
PSEN1-209ENST00000553855 URB1-AS1Q96HZ7 61 aa5.35□□□□□ -1.55
PSEN1-209ENST00000553855 GAGE2DQ9UEU5 116 aa5.35□□□□□ -1.55
PSEN1-209ENST00000553855 SCO1O75880 301 aa5.34□□□□□ -1.55
PSEN1-209ENST00000553855 ATP5LO75964 103 aa5.34□□□□□ -1.55
PSEN1-209ENST00000553855 INAFM2P0DMQ5 153 aa5.34□□□□□ -1.55
PSEN1-209ENST00000553855 SEC61BP60468 96 aaKnown RBP5.34□□□□□ -1.55
PSEN1-209ENST00000553855 CKS1BP61024 79 aa5.34□□□□□ -1.55
PSEN1-209ENST00000553855 PMVKQ15126 192 aa5.34□□□□□ -1.55
PSEN1-209ENST00000553855 C6orf226Q5I0X4 101 aa5.34□□□□□ -1.55
PSEN1-209ENST00000553855 Q6ZRU5 148 aa5.34□□□□□ -1.55
PSEN1-209ENST00000553855 LINC00469Q8N7U9 141 aa5.34□□□□□ -1.55
PSEN1-209ENST00000553855 FAM104AQ969W3 186 aa5.34□□□□□ -1.55
PSEN1-209ENST00000553855 CHCHD1Q96BP2 118 aaKnown RBP5.34□□□□□ -1.55
PSEN1-209ENST00000553855 TOMM7Q9P0U1 55 aa5.34□□□□□ -1.55
PSEN1-209ENST00000553855 H3BRM9 83 aa5.33□□□□□ -1.56
PSEN1-209ENST00000553855 HSBP1O75506 76 aa5.33□□□□□ -1.56
PSEN1-209ENST00000553855 RPL18AQ02543 176 aaKnown RBP5.33□□□□□ -1.56
PSEN1-209ENST00000553855 ZC2HC1BQ5TFG8 222 aa5.33□□□□□ -1.56
PSEN1-209ENST00000553855 LINC00173Q6ZV60 143 aa5.33□□□□□ -1.56
PSEN1-209ENST00000553855 STPG4Q8N801 248 aa5.33□□□□□ -1.56
PSEN1-209ENST00000553855 SPACA4Q8TDM5 124 aa5.33□□□□□ -1.56
PSEN1-209ENST00000553855 A0A087WYN8 130 aa5.32□□□□□ -1.56
PSEN1-209ENST00000553855 IGLV5-39A0A0G2JS06 123 aa5.32□□□□□ -1.56
PSEN1-209ENST00000553855 A0A0J9YXV3 536 aa5.32□□□□□ -1.56
PSEN1-209ENST00000553855 TINCRA0A1B0GVN0 87 aa5.32□□□□□ -1.56
PSEN1-209ENST00000553855 CHTF8P0CG12 524 aa5.32□□□□□ -1.56
PSEN1-209ENST00000553855 RPL37AP61513 92 aaKnown RBP5.32□□□□□ -1.56
PSEN1-209ENST00000553855 FAM19A3Q7Z5A8 133 aa5.32□□□□□ -1.56
PSEN1-209ENST00000553855 YPEL4Q96NS1 127 aa5.32□□□□□ -1.56
PSEN1-209ENST00000553855 CST9LQ9H4G1 147 aa5.32□□□□□ -1.56
PSEN1-209ENST00000553855 MRPL35Q9NZE8 188 aaKnown RBP5.32□□□□□ -1.56
PSEN1-209ENST00000553855 HSPG2P98160 4391 aa5.31□□□□□ -1.56
PSEN1-209ENST00000553855 A0A096LNI7 61 aa5.31□□□□□ -1.56
PSEN1-209ENST00000553855 TRBV30A0A0K0K1B3 111 aa5.31□□□□□ -1.56
PSEN1-209ENST00000553855 TRGC2P03986 189 aa5.31□□□□□ -1.56
PSEN1-209ENST00000553855 CXCL5P42830 114 aa5.31□□□□□ -1.56
PSEN1-209ENST00000553855 CIRBPQ14011 172 aaKnown RBP5.31□□□□□ -1.56
PSEN1-209ENST00000553855 PMCHL1Q16048 86 aa5.31□□□□□ -1.56
PSEN1-209ENST00000553855 PDZD11Q5EBL8 140 aa5.3□□□□□ -1.56
PSEN1-209ENST00000553855 Q8IZM0 81 aa5.3□□□□□ -1.56
PSEN1-209ENST00000553855 KRTAP4-5Q9BYR2 181 aa5.3□□□□□ -1.56
PSEN1-209ENST00000553855 PLAC8Q9NZF1 115 aa5.3□□□□□ -1.56
PSEN1-209ENST00000553855 CDKN2A-AS1Q9UH64 79 aa5.3□□□□□ -1.56
PSEN1-209ENST00000553855 DNAH8Q96JB1 4490 aa5.3□□□□□ -1.56
PSEN1-209ENST00000553855 PANO1I0J062 215 aa5.29□□□□□ -1.56
PSEN1-209ENST00000553855 UNQ6190/PRO20217Q6UXQ8 127 aa5.29□□□□□ -1.56
PSEN1-209ENST00000553855 COX7B2Q8TF08 81 aa5.29□□□□□ -1.56
PSEN1-209ENST00000553855 LOC105371267A0A1B0GV96 52 aa5.28□□□□□ -1.56
PSEN1-209ENST00000553855 COLCA2A8K830 154 aa5.28□□□□□ -1.56
PSEN1-209ENST00000553855 F8VRH5 84 aa5.28□□□□□ -1.56
PSEN1-209ENST00000553855 KIAA0087Q14695 138 aa5.28□□□□□ -1.56
PSEN1-209ENST00000553855 C2orf82Q6UX34 121 aa5.28□□□□□ -1.56
PSEN1-209ENST00000553855 Q75L30 129 aa5.28□□□□□ -1.56
PSEN1-209ENST00000553855 IFI27L1Q96BM0 104 aa5.28□□□□□ -1.56
PSEN1-209ENST00000553855 C6orf48Q9UBA6 75 aa5.28□□□□□ -1.56
PSEN1-209ENST00000553855 CHTOPQ9Y3Y2 248 aaKnown RBP5.28□□□□□ -1.56
PSEN1-209ENST00000553855 IGLV5-45A0A087WSX0 123 aa5.27□□□□□ -1.57
PSEN1-209ENST00000553855 A0A096LNJ9 63 aa5.27□□□□□ -1.57
PSEN1-209ENST00000553855 SMIM1B2RUZ4 78 aa5.27□□□□□ -1.57
PSEN1-209ENST00000553855 NDUFC2-KCTD14E9PQ53 114 aa5.27□□□□□ -1.57
PSEN1-209ENST00000553855 LEPROTL1O95214 131 aa5.27□□□□□ -1.57
PSEN1-209ENST00000553855 SPINK8P0C7L1 97 aa5.27□□□□□ -1.57
PSEN1-209ENST00000553855 TLX1NBP0CAT3 122 aa5.27□□□□□ -1.57
PSEN1-209ENST00000553855 IGLC3P0DOY3 106 aa5.27□□□□□ -1.57
PSEN1-209ENST00000553855 TMEM170BQ5T4T1 132 aa5.27□□□□□ -1.57
PSEN1-209ENST00000553855 HSPB8Q9UJY1 196 aa5.27□□□□□ -1.57
PSEN1-209ENST00000553855 TRAV12-1A0A0B4J245 112 aa5.26□□□□□ -1.57
PSEN1-209ENST00000553855 C5orf52A6NGY3 159 aa5.26□□□□□ -1.57
PSEN1-209ENST00000553855 H0Y8G0 127 aa5.26□□□□□ -1.57
PSEN1-209ENST00000553855 SERF1AO75920 110 aa5.26□□□□□ -1.57
PSEN1-209ENST00000553855 C9orf116Q5BN46 136 aaPredicted RBP5.26□□□□□ -1.57
PSEN1-209ENST00000553855 SFTA2Q6UW10 78 aa5.26□□□□□ -1.57
PSEN1-209ENST00000553855 FAT1Q14517 4588 aa5.26□□□□□ -1.57
PSEN1-209ENST00000553855 KRTAP15-1Q3LI76 137 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms