RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 LRP6O75581 1613 aa1.93□□□□□ -2.1
TDP1-207ENST00000553617 IGKV3D-7A0A0C4DH55 119 aa1.93□□□□□ -2.1
TDP1-207ENST00000553617 IGKV3OR2-268A0A0C4DH90 116 aa1.93□□□□□ -2.1
TDP1-207ENST00000553617 A0A1B0GUT8 65 aa1.93□□□□□ -2.1
TDP1-207ENST00000553617 TRBV6-4A0A1B0GX49 114 aa1.93□□□□□ -2.1
TDP1-207ENST00000553617 IFI6P09912 130 aa1.93□□□□□ -2.1
TDP1-207ENST00000553617 TTTY12Q9BZ98 90 aa1.93□□□□□ -2.1
TDP1-207ENST00000553617 TJP1Q07157 1748 aa1.93□□□□□ -2.1
TDP1-207ENST00000553617 INTS1Q8N201 2190 aaKnown RBP1.93□□□□□ -2.1
TDP1-207ENST00000553617 COL14A1Q05707 1796 aaKnown RBP1.93□□□□□ -2.1
TDP1-207ENST00000553617 DLEC1Q9Y238 1755 aa1.93□□□□□ -2.1
TDP1-207ENST00000553617 SLIT1O75093 1534 aa1.92□□□□□ -2.1
TDP1-207ENST00000553617 CICQ96RK0 1608 aaPredicted RBP1.92□□□□□ -2.1
TDP1-207ENST00000553617 PKD1L3Q7Z443 1732 aa1.92□□□□□ -2.1
TDP1-207ENST00000553617 A0A0G2JQZ4 141 aa1.92□□□□□ -2.1
TDP1-207ENST00000553617 TRBV30A0A0K0K1B3 111 aa1.92□□□□□ -2.1
TDP1-207ENST00000553617 M0R135 149 aa1.92□□□□□ -2.1
TDP1-207ENST00000553617 UQCR11O14957 56 aa1.92□□□□□ -2.1
TDP1-207ENST00000553617 SMIM4Q8WVI0 70 aa1.92□□□□□ -2.1
TDP1-207ENST00000553617 WFDC10AQ9H1F0 79 aa1.92□□□□□ -2.1
TDP1-207ENST00000553617 CMC2Q9NRP2 79 aa1.92□□□□□ -2.1
TDP1-207ENST00000553617 BRWD1Q9NSI6 2320 aa1.92□□□□□ -2.1
TDP1-207ENST00000553617 COL4A1P02462 1669 aa1.92□□□□□ -2.1
TDP1-207ENST00000553617 COL4A5P29400 1685 aa1.92□□□□□ -2.1
TDP1-207ENST00000553617 RICTORQ6R327 1708 aa1.91□□□□□ -2.1
TDP1-207ENST00000553617 NCOA6Q14686 2063 aaPredicted RBP1.91□□□□□ -2.1
TDP1-207ENST00000553617 CTXND1A0A1B0GTU2 59 aa1.91□□□□□ -2.1
TDP1-207ENST00000553617 FCER1GP30273 86 aa1.91□□□□□ -2.1
TDP1-207ENST00000553617 LINC00846Q9NV44 126 aa1.91□□□□□ -2.1
TDP1-207ENST00000553617 V9GYV3 84 aa1.91□□□□□ -2.1
TDP1-207ENST00000553617 ZFHX3Q15911 3703 aa1.91□□□□□ -2.1
TDP1-207ENST00000553617 C3P01024 1663 aa1.9□□□□□ -2.1
TDP1-207ENST00000553617 NDUFB1O75438 58 aa1.9□□□□□ -2.11
TDP1-207ENST00000553617 MGPP08493 103 aa1.9□□□□□ -2.11
TDP1-207ENST00000553617 TPRXLQ17RH7 258 aa1.9□□□□□ -2.11
TDP1-207ENST00000553617 PLAC8Q9NZF1 115 aa1.9□□□□□ -2.11
TDP1-207ENST00000553617 KLK9Q9UKQ9 250 aa1.9□□□□□ -2.11
TDP1-207ENST00000553617 BCORQ6W2J9 1755 aa1.9□□□□□ -2.11
TDP1-207ENST00000553617 RREB1Q92766 1687 aa1.9□□□□□ -2.11
TDP1-207ENST00000553617 RTTNQ86VV8 2226 aa1.89□□□□□ -2.11
TDP1-207ENST00000553617 DEPDC5O75140 1603 aa1.89□□□□□ -2.11
TDP1-207ENST00000553617 NHSL1Q5SYE7 1610 aa1.89□□□□□ -2.11
TDP1-207ENST00000553617 RNASE3P12724 160 aaKnown RBP1.89□□□□□ -2.11
TDP1-207ENST00000553617 ZNF137PP52743 207 aa1.89□□□□□ -2.11
TDP1-207ENST00000553617 NREPQ16612 68 aa1.89□□□□□ -2.11
TDP1-207ENST00000553617 HCP5Q6MZN7 132 aa1.89□□□□□ -2.11
TDP1-207ENST00000553617 SPACA4Q8TDM5 124 aa1.89□□□□□ -2.11
TDP1-207ENST00000553617 COL5A1P20908 1838 aaPredicted RBP1.89□□□□□ -2.11
TDP1-207ENST00000553617 PAPPA2Q9BXP8 1791 aa1.88□□□□□ -2.11
TDP1-207ENST00000553617 FREM1Q5H8C1 2179 aa1.88□□□□□ -2.11
TDP1-207ENST00000553617 ALPK2Q86TB3 2170 aa1.88□□□□□ -2.11
TDP1-207ENST00000553617 C5P01031 1676 aa1.88□□□□□ -2.11
TDP1-207ENST00000553617 A0A087WTM6 91 aa1.88□□□□□ -2.11
TDP1-207ENST00000553617 IGKV2-40A0A087WW87 121 aaPredicted RBP1.88□□□□□ -2.11
TDP1-207ENST00000553617 TRAV21A0A0B4J279 112 aa1.88□□□□□ -2.11
TDP1-207ENST00000553617 NBDYA0A0U1RRE5 68 aa1.88□□□□□ -2.11
TDP1-207ENST00000553617 H0Y9P7 68 aa1.88□□□□□ -2.11
TDP1-207ENST00000553617 IGKV2D-40P01614 121 aaPredicted RBP1.88□□□□□ -2.11
TDP1-207ENST00000553617 RPL37AP61513 92 aaKnown RBP1.88□□□□□ -2.11
TDP1-207ENST00000553617 KRTAP5-5Q701N2 237 aaPredicted RBP1.88□□□□□ -2.11
TDP1-207ENST00000553617 DEFB132Q7Z7B7 95 aa1.88□□□□□ -2.11
TDP1-207ENST00000553617 TMEM263Q8WUH6 116 aaKnown RBP1.88□□□□□ -2.11
TDP1-207ENST00000553617 LINC00208Q96KT6 92 aa1.88□□□□□ -2.11
TDP1-207ENST00000553617 SPRR4Q96PI1 79 aa1.88□□□□□ -2.11
TDP1-207ENST00000553617 WFDC6Q9BQY6 131 aa1.88□□□□□ -2.11
TDP1-207ENST00000553617 ABRACLQ9P1F3 81 aa1.88□□□□□ -2.11
TDP1-207ENST00000553617 ERCC6L2Q5T890 1561 aa1.88□□□□□ -2.11
TDP1-207ENST00000553617 ZNF831Q5JPB2 1677 aa1.87□□□□□ -2.11
TDP1-207ENST00000553617 IGKV2-29A2NJV5 120 aaPredicted RBP1.87□□□□□ -2.11
TDP1-207ENST00000553617 SPINK7P58062 85 aa1.87□□□□□ -2.11
TDP1-207ENST00000553617 FXYD3Q14802 87 aa1.87□□□□□ -2.11
TDP1-207ENST00000553617 C10orf55Q5SWW7 151 aa1.87□□□□□ -2.11
TDP1-207ENST00000553617 TMEM14CQ9P0S9 112 aa1.87□□□□□ -2.11
TDP1-207ENST00000553617 FAM208AQ9UK61 1670 aaKnown RBP1.86□□□□□ -2.11
TDP1-207ENST00000553617 TRGV4A0A0C4DH28 118 aa1.86□□□□□ -2.11
TDP1-207ENST00000553617 J3QRE1 110 aa1.86□□□□□ -2.11
TDP1-207ENST00000553617 K7EMI3 77 aa1.86□□□□□ -2.11
TDP1-207ENST00000553617 IL9P15248 144 aa1.86□□□□□ -2.11
TDP1-207ENST00000553617 C10orf113Q5VZT2 155 aa1.86□□□□□ -2.11
TDP1-207ENST00000553617 ENHOQ6UWT2 76 aa1.86□□□□□ -2.11
TDP1-207ENST00000553617 C5orf56Q8N8D9 126 aa1.86□□□□□ -2.11
TDP1-207ENST00000553617 WFDC9Q8NEX5 89 aa1.86□□□□□ -2.11
TDP1-207ENST00000553617 DDX60LQ5H9U9 1706 aaKnown RBP1.86□□□□□ -2.11
TDP1-207ENST00000553617 NRXN3Q9Y4C0 1643 aa1.85□□□□□ -2.11
TDP1-207ENST00000553617 FXYD4P59646 89 aa1.85□□□□□ -2.11
TDP1-207ENST00000553617 COX17Q14061 63 aa1.85□□□□□ -2.11
TDP1-207ENST00000553617 SPATA8Q6RVD6 105 aa1.85□□□□□ -2.11
TDP1-207ENST00000553617 LINC00322Q6ZN03 302 aaPredicted RBP1.85□□□□□ -2.11
TDP1-207ENST00000553617 TXNDC17Q9BRA2 123 aa1.85□□□□□ -2.11
TDP1-207ENST00000553617 UBL5Q9BZL1 73 aa1.85□□□□□ -2.11
TDP1-207ENST00000553617 LY75O60449 1722 aa1.85□□□□□ -2.11
TDP1-207ENST00000553617 QSER1Q2KHR3 1735 aa1.85□□□□□ -2.11
TDP1-207ENST00000553617 NRAPQ86VF7 1730 aa1.85□□□□□ -2.11
TDP1-207ENST00000553617 MED13LQ71F56 2210 aa1.85□□□□□ -2.11
TDP1-207ENST00000553617 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.84□□□□□ -2.11
TDP1-207ENST00000553617 TRGV1A0A0A0MS02 117 aa1.84□□□□□ -2.11
TDP1-207ENST00000553617 TRAV1-2A0A0B4J238 106 aa1.84□□□□□ -2.11
TDP1-207ENST00000553617 TRBV6-1A0A0K0K1D8 114 aa1.84□□□□□ -2.11
TDP1-207ENST00000553617 LCE6AA0A183 80 aa1.84□□□□□ -2.11
TDP1-207ENST00000553617 DOT1LQ8TEK3 1739 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms