RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 CELA1Q9UNI1 258 aa4.14□□□□□ -1.75
VIPAS39-204ENST00000553576 M0QXV9 152 aa4.13□□□□□ -1.75
VIPAS39-204ENST00000553576 PRSS2P07478 247 aa4.13□□□□□ -1.75
VIPAS39-204ENST00000553576 OCIAD2Q56VL3 154 aa4.13□□□□□ -1.75
VIPAS39-204ENST00000553576 COX7B2Q8TF08 81 aa4.13□□□□□ -1.75
VIPAS39-204ENST00000553576 LINC01600Q96MT4 127 aa4.13□□□□□ -1.75
VIPAS39-204ENST00000553576 ANK2Q01484 3957 aa4.12□□□□□ -1.75
VIPAS39-204ENST00000553576 A0A096LPF7 62 aa4.12□□□□□ -1.75
VIPAS39-204ENST00000553576 IBA57-AS1B1ANH7 110 aa4.12□□□□□ -1.75
VIPAS39-204ENST00000553576 TMEM262E9PQX1 116 aa4.12□□□□□ -1.75
VIPAS39-204ENST00000553576 H3BMG7 143 aa4.12□□□□□ -1.75
VIPAS39-204ENST00000553576 K7ERU9 68 aa4.12□□□□□ -1.75
VIPAS39-204ENST00000553576 DEFB4AO15263 64 aa4.12□□□□□ -1.75
VIPAS39-204ENST00000553576 CD164L2Q6UWJ8 174 aa4.12□□□□□ -1.75
VIPAS39-204ENST00000553576 LINC00308Q8TCZ7 52 aa4.12□□□□□ -1.75
VIPAS39-204ENST00000553576 ICOSQ9Y6W8 199 aa4.12□□□□□ -1.75
VIPAS39-204ENST00000553576 NBEAL2Q6ZNJ1 2754 aa4.11□□□□□ -1.75
VIPAS39-204ENST00000553576 LOC107984156A0A0G2JMH3 177 aa4.11□□□□□ -1.75
VIPAS39-204ENST00000553576 G3V4G9 280 aa4.11□□□□□ -1.75
VIPAS39-204ENST00000553576 ARL17AQ8IVW1 177 aa4.11□□□□□ -1.75
VIPAS39-204ENST00000553576 Q8IZM0 81 aa4.11□□□□□ -1.75
VIPAS39-204ENST00000553576 PRR34Q9NV39 138 aa4.11□□□□□ -1.75
VIPAS39-204ENST00000553576 FBN1P35555 2871 aaKnown RBP4.1□□□□□ -1.75
VIPAS39-204ENST00000553576 TCL1BO95988 128 aa4.1□□□□□ -1.75
VIPAS39-204ENST00000553576 SCGB1C2P0DMR2 95 aa4.1□□□□□ -1.75
VIPAS39-204ENST00000553576 PSMB2P49721 201 aa4.1□□□□□ -1.75
VIPAS39-204ENST00000553576 REG3AQ06141 175 aa4.1□□□□□ -1.75
VIPAS39-204ENST00000553576 WFDC2Q14508 124 aa4.1□□□□□ -1.75
VIPAS39-204ENST00000553576 KIAA0087Q14695 138 aa4.1□□□□□ -1.75
VIPAS39-204ENST00000553576 MEIG1Q5JSS6 88 aa4.1□□□□□ -1.75
VIPAS39-204ENST00000553576 LYPD5Q6UWN5 251 aa4.1□□□□□ -1.75
VIPAS39-204ENST00000553576 SOSTDC1Q6X4U4 206 aa4.1□□□□□ -1.75
VIPAS39-204ENST00000553576 C5orf38Q86SI9 138 aa4.1□□□□□ -1.75
VIPAS39-204ENST00000553576 KLK5Q9Y337 293 aaPredicted RBP4.1□□□□□ -1.75
VIPAS39-204ENST00000553576 IGKV3OR2-268A0A0C4DH90 116 aa4.09□□□□□ -1.75
VIPAS39-204ENST00000553576 CYSRT1A8MQ03 144 aa4.09□□□□□ -1.75
VIPAS39-204ENST00000553576 COX6CP09669 75 aa4.09□□□□□ -1.75
VIPAS39-204ENST00000553576 CXCL5P42830 114 aa4.09□□□□□ -1.75
VIPAS39-204ENST00000553576 COX17Q14061 63 aa4.09□□□□□ -1.75
VIPAS39-204ENST00000553576 C21orf62-AS1Q17RA5 79 aa4.09□□□□□ -1.75
VIPAS39-204ENST00000553576 C6orf226Q5I0X4 101 aa4.09□□□□□ -1.75
VIPAS39-204ENST00000553576 LINC00269Q8N2A0 174 aa4.09□□□□□ -1.75
VIPAS39-204ENST00000553576 MUC7Q8TAX7 377 aa4.09□□□□□ -1.75
VIPAS39-204ENST00000553576 CHCHD10Q8WYQ3 142 aaPredicted RBP4.09□□□□□ -1.75
VIPAS39-204ENST00000553576 TRAV13-2A0A0B4J235 113 aa4.08□□□□□ -1.76
VIPAS39-204ENST00000553576 TRAV8-4A0A0B4J246 113 aa4.08□□□□□ -1.76
VIPAS39-204ENST00000553576 COX7A2LO14548 114 aa4.08□□□□□ -1.76
VIPAS39-204ENST00000553576 TRIAP1O43715 76 aa4.08□□□□□ -1.76
VIPAS39-204ENST00000553576 ANGP03950 147 aaKnown RBP4.08□□□□□ -1.76
VIPAS39-204ENST00000553576 FOXI1Q12951 378 aa4.08□□□□□ -1.76
VIPAS39-204ENST00000553576 ATXN8Q156A1 80 aa4.08□□□□□ -1.76
VIPAS39-204ENST00000553576 KPRPQ5T749 579 aaPredicted RBP4.08□□□□□ -1.76
VIPAS39-204ENST00000553576 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
VIPAS39-204ENST00000553576 DAND5Q8N907 189 aa4.08□□□□□ -1.76
VIPAS39-204ENST00000553576 CBY1Q9Y3M2 126 aa4.08□□□□□ -1.76
VIPAS39-204ENST00000553576 J3QR89 54 aa4.07□□□□□ -1.76
VIPAS39-204ENST00000553576 HTN3P15516 51 aa4.07□□□□□ -1.76
VIPAS39-204ENST00000553576 XCL1P47992 114 aa4.07□□□□□ -1.76
VIPAS39-204ENST00000553576 LINC00158P58513 81 aa4.07□□□□□ -1.76
VIPAS39-204ENST00000553576 NPC2P61916 151 aa4.07□□□□□ -1.76
VIPAS39-204ENST00000553576 ETDBQ3ZM63 59 aa4.07□□□□□ -1.76
VIPAS39-204ENST00000553576 ENHOQ6UWT2 76 aa4.07□□□□□ -1.76
VIPAS39-204ENST00000553576 MIR7-3HGQ8N6C7 128 aa4.07□□□□□ -1.76
VIPAS39-204ENST00000553576 TM2D3Q9BRN9 247 aa4.07□□□□□ -1.76
VIPAS39-204ENST00000553576 RETNQ9HD89 108 aa4.07□□□□□ -1.76
VIPAS39-204ENST00000553576 TOMM7Q9P0U1 55 aa4.07□□□□□ -1.76
VIPAS39-204ENST00000553576 FLNBO75369 2602 aaKnown RBP4.06□□□□□ -1.76
VIPAS39-204ENST00000553576 TRBV10-2A0A0K0K1G8 114 aa4.06□□□□□ -1.76
VIPAS39-204ENST00000553576 LST1O00453 97 aa4.06□□□□□ -1.76
VIPAS39-204ENST00000553576 RPL13AP40429 203 aaKnown RBP4.06□□□□□ -1.76
VIPAS39-204ENST00000553576 RPL28P46779 137 aaKnown RBP4.06□□□□□ -1.76
VIPAS39-204ENST00000553576 CCL18P55774 89 aa4.06□□□□□ -1.76
VIPAS39-204ENST00000553576 Q1RN00 199 aa4.06□□□□□ -1.76
VIPAS39-204ENST00000553576 LINC01620Q4KN68 170 aa4.06□□□□□ -1.76
VIPAS39-204ENST00000553576 Q6ZTC4 211 aa4.06□□□□□ -1.76
VIPAS39-204ENST00000553576 TEN1Q86WV5 123 aa4.06□□□□□ -1.76
VIPAS39-204ENST00000553576 C11orf45Q8TAV5 145 aa4.06□□□□□ -1.76
VIPAS39-204ENST00000553576 SND1-IT1Q9HBX3 110 aa4.06□□□□□ -1.76
VIPAS39-204ENST00000553576 HUWE1Q7Z6Z7 4374 aaKnown RBP4.06□□□□□ -1.76
VIPAS39-204ENST00000553576 IGKV2-28A0A075B6P5 120 aa4.05□□□□□ -1.76
VIPAS39-204ENST00000553576 DEFB131BA0A096LNP1 70 aa4.05□□□□□ -1.76
VIPAS39-204ENST00000553576 GVQW2A0A096LPI5 108 aaPredicted RBP4.05□□□□□ -1.76
VIPAS39-204ENST00000553576 A0A0J9YWU9 116 aa4.05□□□□□ -1.76
VIPAS39-204ENST00000553576 A0A0U1RRA0 63 aa4.05□□□□□ -1.76
VIPAS39-204ENST00000553576 KRTAP29-1A8MX34 341 aaPredicted RBP4.05□□□□□ -1.76
VIPAS39-204ENST00000553576 H3BT86 120 aa4.05□□□□□ -1.76
VIPAS39-204ENST00000553576 H7C2G1 150 aa4.05□□□□□ -1.76
VIPAS39-204ENST00000553576 SLC25A20O43772 301 aa4.05□□□□□ -1.76
VIPAS39-204ENST00000553576 NDUFC2O95298 119 aa4.05□□□□□ -1.76
VIPAS39-204ENST00000553576 IGKV2D-28P01615 120 aa4.05□□□□□ -1.76
VIPAS39-204ENST00000553576 CKS1BP61024 79 aa4.05□□□□□ -1.76
VIPAS39-204ENST00000553576 ESRGQ1W209 222 aa4.05□□□□□ -1.76
VIPAS39-204ENST00000553576 KRTAP26-1Q6PEX3 210 aa4.05□□□□□ -1.76
VIPAS39-204ENST00000553576 ANKRD29Q8N6D5 301 aa4.05□□□□□ -1.76
VIPAS39-204ENST00000553576 KLK12Q9UKR0 248 aa4.05□□□□□ -1.76
VIPAS39-204ENST00000553576 BAHCC1Q9P281 2608 aa4.05□□□□□ -1.76
VIPAS39-204ENST00000553576 STAB1Q9NY15 2570 aa4.04□□□□□ -1.76
VIPAS39-204ENST00000553576 GAGE12HA6NDE8 117 aa4.04□□□□□ -1.76
VIPAS39-204ENST00000553576 F8WDY8 70 aa4.04□□□□□ -1.76
VIPAS39-204ENST00000553576 K7EIL1 84 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms