RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 TRBV6-5A0A0K0K1A5 114 aa3.06□□□□□ -1.92
ATXN3-220ENST00000553491 NPYP01303 97 aa3.06□□□□□ -1.92
ATXN3-220ENST00000553491 PPBPP02775 128 aa3.06□□□□□ -1.92
ATXN3-220ENST00000553491 POLR2KP53803 58 aaKnown RBP3.06□□□□□ -1.92
ATXN3-220ENST00000553491 DSCR10P59022 87 aa3.06□□□□□ -1.92
ATXN3-220ENST00000553491 SMAGPQ0VAQ4 97 aa3.06□□□□□ -1.92
ATXN3-220ENST00000553491 ATP5L2Q7Z4Y8 100 aa3.06□□□□□ -1.92
ATXN3-220ENST00000553491 Q8N814 137 aa3.06□□□□□ -1.92
ATXN3-220ENST00000553491 C20orf203Q8NBC4 194 aa3.06□□□□□ -1.92
ATXN3-220ENST00000553491 C20orf78Q9BR46 151 aa3.06□□□□□ -1.92
ATXN3-220ENST00000553491 GNB1LQ9BYB4 327 aa3.06□□□□□ -1.92
ATXN3-220ENST00000553491 MAP1LC3AQ9H492 121 aa3.06□□□□□ -1.92
ATXN3-220ENST00000553491 TRAPPC1Q9Y5R8 145 aa3.06□□□□□ -1.92
ATXN3-220ENST00000553491 TRAV13-1A0A0B4J241 112 aa3.05□□□□□ -1.92
ATXN3-220ENST00000553491 TRAV8-4A0A0B4J246 113 aa3.05□□□□□ -1.92
ATXN3-220ENST00000553491 TRBV27A0A0K0K1C4 114 aa3.05□□□□□ -1.92
ATXN3-220ENST00000553491 A0A1B0GXF2 115 aa3.05□□□□□ -1.92
ATXN3-220ENST00000553491 LRCOL1A6NCL2 159 aa3.05□□□□□ -1.92
ATXN3-220ENST00000553491 M0R143 59 aa3.05□□□□□ -1.92
ATXN3-220ENST00000553491 XCL1P47992 114 aa3.05□□□□□ -1.92
ATXN3-220ENST00000553491 RPL39P62891 51 aaKnown RBP3.05□□□□□ -1.92
ATXN3-220ENST00000553491 HAMPP81172 84 aa3.05□□□□□ -1.92
ATXN3-220ENST00000553491 WFDC2Q14508 124 aa3.05□□□□□ -1.92
ATXN3-220ENST00000553491 ZNF664Q8N3J9 261 aa3.05□□□□□ -1.92
ATXN3-220ENST00000553491 CHCHD10Q8WYQ3 142 aaPredicted RBP3.05□□□□□ -1.92
ATXN3-220ENST00000553491 VPS13DQ5THJ4 4388 aa3.05□□□□□ -1.92
ATXN3-220ENST00000553491 LINC00959A0A1B0GUT2 108 aa3.04□□□□□ -1.92
ATXN3-220ENST00000553491 C20orf202A1L168 122 aa3.04□□□□□ -1.92
ATXN3-220ENST00000553491 CCL25O15444 150 aa3.04□□□□□ -1.92
ATXN3-220ENST00000553491 SMR3BP02814 79 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-220ENST00000553491 ZNF25P17030 456 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-220ENST00000553491 IFI27P40305 119 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-220ENST00000553491 KRTAP10-1P60331 282 aa3.04□□□□□ -1.92
ATXN3-220ENST00000553491 Q1RN00 199 aa3.04□□□□□ -1.92
ATXN3-220ENST00000553491 Q8N8P6 123 aa3.04□□□□□ -1.92
ATXN3-220ENST00000553491 TYMSOSQ8TAI1 123 aa3.04□□□□□ -1.92
ATXN3-220ENST00000553491 SMIM2Q9BVW6 85 aa3.04□□□□□ -1.92
ATXN3-220ENST00000553491 DNAH1Q9P2D7 4330 aa3.04□□□□□ -1.92
ATXN3-220ENST00000553491 TEX43Q6ZNM6 134 aa3.03□□□□□ -1.92
ATXN3-220ENST00000553491 FA2HQ7L5A8 372 aa3.03□□□□□ -1.92
ATXN3-220ENST00000553491 C5orf38Q86SI9 138 aa3.03□□□□□ -1.92
ATXN3-220ENST00000553491 LINC00526Q96FQ7 95 aa3.03□□□□□ -1.92
ATXN3-220ENST00000553491 CDC42SE2Q9NRR3 84 aa3.03□□□□□ -1.92
ATXN3-220ENST00000553491 PRR34Q9NV39 138 aa3.03□□□□□ -1.92
ATXN3-220ENST00000553491 RYR2Q92736 4967 aa3.03□□□□□ -1.92
ATXN3-220ENST00000553491 SACSQ9NZJ4 4579 aa3.03□□□□□ -1.92
ATXN3-220ENST00000553491 FRAS1Q86XX4 4008 aa3.03□□□□□ -1.93
ATXN3-220ENST00000553491 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-220ENST00000553491 LINC00614P0C842 121 aa3.02□□□□□ -1.93
ATXN3-220ENST00000553491 G0S2P27469 103 aa3.02□□□□□ -1.93
ATXN3-220ENST00000553491 PMCHL1Q16048 86 aa3.02□□□□□ -1.93
ATXN3-220ENST00000553491 ORMDL2Q53FV1 153 aa3.02□□□□□ -1.93
ATXN3-220ENST00000553491 PDZD11Q5EBL8 140 aa3.02□□□□□ -1.93
ATXN3-220ENST00000553491 Q6ZN92 141 aa3.02□□□□□ -1.93
ATXN3-220ENST00000553491 Q6ZUT4 128 aa3.02□□□□□ -1.93
ATXN3-220ENST00000553491 SCGB3A1Q96QR1 104 aa3.02□□□□□ -1.93
ATXN3-220ENST00000553491 MIEN1Q9BRT3 115 aa3.02□□□□□ -1.93
ATXN3-220ENST00000553491 VCX2Q9H322 139 aa3.02□□□□□ -1.93
ATXN3-220ENST00000553491 NXT2Q9NPJ8 142 aaKnown RBP3.02□□□□□ -1.93
ATXN3-220ENST00000553491 CYSLTR1Q9Y271 337 aa3.02□□□□□ -1.93
ATXN3-220ENST00000553491 LAMTOR2Q9Y2Q5 125 aa3.02□□□□□ -1.93
ATXN3-220ENST00000553491 UBE2D4Q9Y2X8 147 aa3.02□□□□□ -1.93
ATXN3-220ENST00000553491 DNAH6Q9C0G6 4158 aa3.02□□□□□ -1.93
ATXN3-220ENST00000553491 COX7A2LO14548 114 aa3.01□□□□□ -1.93
ATXN3-220ENST00000553491 APOMO95445 188 aa3.01□□□□□ -1.93
ATXN3-220ENST00000553491 RPL32P62910 135 aaKnown RBP3.01□□□□□ -1.93
ATXN3-220ENST00000553491 CXCL6P80162 114 aa3.01□□□□□ -1.93
ATXN3-220ENST00000553491 KRTAP26-1Q6PEX3 210 aa3.01□□□□□ -1.93
ATXN3-220ENST00000553491 C2orf66Q6UXQ4 117 aa3.01□□□□□ -1.93
ATXN3-220ENST00000553491 BAGE3Q86Y29 109 aa3.01□□□□□ -1.93
ATXN3-220ENST00000553491 TMEM141Q96I45 108 aa3.01□□□□□ -1.93
ATXN3-220ENST00000553491 VAMP8Q9BV40 100 aa3.01□□□□□ -1.93
ATXN3-220ENST00000553491 TIMM21Q9BVV7 248 aa3.01□□□□□ -1.93
ATXN3-220ENST00000553491 PRO1933Q9H354 126 aa3.01□□□□□ -1.93
ATXN3-220ENST00000553491 SPANXA1Q9NS26 97 aa3.01□□□□□ -1.93
ATXN3-220ENST00000553491 IGHV3-64A0A075B6Q5 118 aa3□□□□□ -1.93
ATXN3-220ENST00000553491 IGHV1-58A0A0C4DH39 117 aa3□□□□□ -1.93
ATXN3-220ENST00000553491 IGKV2-24A0A0C4DH68 120 aa3□□□□□ -1.93
ATXN3-220ENST00000553491 A0A1B0GV90 55 aa3□□□□□ -1.93
ATXN3-220ENST00000553491 COL5A1-AS1Q5SY13 56 aa3□□□□□ -1.93
ATXN3-220ENST00000553491 LINC01561Q8N1V8 128 aa3□□□□□ -1.93
ATXN3-220ENST00000553491 CHCHD1Q96BP2 118 aaKnown RBP3□□□□□ -1.93
ATXN3-220ENST00000553491 GEMIN7Q9H840 131 aaKnown RBP3□□□□□ -1.93
ATXN3-220ENST00000553491 TOMM7Q9P0U1 55 aa3□□□□□ -1.93
ATXN3-220ENST00000553491 UQCR10Q9UDW1 63 aa3□□□□□ -1.93
ATXN3-220ENST00000553491 CSDC2Q9Y534 153 aaKnown RBP3□□□□□ -1.93
ATXN3-220ENST00000553491 IGLV4-69A0A075B6H9 119 aa2.99□□□□□ -1.93
ATXN3-220ENST00000553491 A0A0J9YXV3 536 aa2.99□□□□□ -1.93
ATXN3-220ENST00000553491 SERF1AO75920 110 aa2.99□□□□□ -1.93
ATXN3-220ENST00000553491 MRPS36P82909 103 aaKnown RBP2.99□□□□□ -1.93
ATXN3-220ENST00000553491 COX6A2Q02221 97 aa2.99□□□□□ -1.93
ATXN3-220ENST00000553491 SYCNQ0VAF6 134 aa2.99□□□□□ -1.93
ATXN3-220ENST00000553491 MAJINQ3KP22 176 aa2.99□□□□□ -1.93
ATXN3-220ENST00000553491 C15orf56Q8N910 161 aa2.99□□□□□ -1.93
ATXN3-220ENST00000553491 C9orf163Q8N9P6 203 aa2.99□□□□□ -1.93
ATXN3-220ENST00000553491 ORAOV1Q8WV07 137 aa2.99□□□□□ -1.93
ATXN3-220ENST00000553491 CAMK2N2Q96S95 79 aa2.99□□□□□ -1.93
ATXN3-220ENST00000553491 SNHG12Q9BXW3 62 aa2.99□□□□□ -1.93
ATXN3-220ENST00000553491 DNAH10Q8IVF4 4471 aa2.98□□□□□ -1.93
ATXN3-220ENST00000553491 H0Y8G0 127 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms