RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 BVES-AS1Q5T3Y7 98 aa11.66□□□□□ -0.54
PSEN1-206ENST00000553447 C2orf82Q6UX34 121 aa11.66□□□□□ -0.54
PSEN1-206ENST00000553447 TM2D2Q9BX73 214 aa11.66□□□□□ -0.54
PSEN1-206ENST00000553447 LYSTQ99698 3801 aa11.65□□□□□ -0.54
PSEN1-206ENST00000553447 SRSF9Q13242 221 aaKnown RBP eCLIP11.65□□□□□ -0.54
PSEN1-206ENST00000553447 CIRBPQ14011 172 aaKnown RBP11.65□□□□□ -0.54
PSEN1-206ENST00000553447 BATFQ16520 125 aa11.65□□□□□ -0.54
PSEN1-206ENST00000553447 CEND1Q8N111 149 aa11.65□□□□□ -0.54
PSEN1-206ENST00000553447 VPS13DQ5THJ4 4388 aa11.65□□□□□ -0.54
PSEN1-206ENST00000553447 GCSHP23434 173 aa11.64□□□□□ -0.55
PSEN1-206ENST00000553447 HIGD2BQ4VC39 106 aa11.64□□□□□ -0.55
PSEN1-206ENST00000553447 ADAMTSL4-AS1Q5T5F5 129 aa11.64□□□□□ -0.55
PSEN1-206ENST00000553447 C6orf223Q8N319 242 aa11.64□□□□□ -0.55
PSEN1-206ENST00000553447 NTN5Q8WTR8 489 aaPredicted RBP11.64□□□□□ -0.55
PSEN1-206ENST00000553447 LINC00526Q96FQ7 95 aa11.64□□□□□ -0.55
PSEN1-206ENST00000553447 SPANXDQ9BXN6 97 aa11.64□□□□□ -0.55
PSEN1-206ENST00000553447 SPANXCQ9NY87 97 aa11.64□□□□□ -0.55
PSEN1-206ENST00000553447 GVQW2A0A096LPI5 108 aaPredicted RBP11.63□□□□□ -0.55
PSEN1-206ENST00000553447 ZNF561-AS1K7EIQ3 104 aa11.62□□□□□ -0.55
PSEN1-206ENST00000553447 SMIM13P0DJ93 91 aa11.62□□□□□ -0.55
PSEN1-206ENST00000553447 TGP01266 2768 aa11.61□□□□□ -0.55
PSEN1-206ENST00000553447 A0A0U1RRA0 63 aa11.61□□□□□ -0.55
PSEN1-206ENST00000553447 USP17L23D6RBM5 183 aa11.61□□□□□ -0.55
PSEN1-206ENST00000553447 Q6ZVH6 145 aa11.61□□□□□ -0.55
PSEN1-206ENST00000553447 ERG28Q9UKR5 140 aa11.61□□□□□ -0.55
PSEN1-206ENST00000553447 LY6G6CO95867 125 aa11.6□□□□□ -0.55
PSEN1-206ENST00000553447 FXYD2P54710 66 aa11.6□□□□□ -0.55
PSEN1-206ENST00000553447 UNQ6190/PRO20217Q6UXQ8 127 aa11.6□□□□□ -0.55
PSEN1-206ENST00000553447 LINC00476Q8WZB0 136 aa11.6□□□□□ -0.55
PSEN1-206ENST00000553447 C2orf48Q96LS8 159 aa11.6□□□□□ -0.55
PSEN1-206ENST00000553447 TENM2Q9NT68 2774 aa11.6□□□□□ -0.55
PSEN1-206ENST00000553447 M0R2N4 97 aa11.59□□□□□ -0.55
PSEN1-206ENST00000553447 C10orf25Q5T742 122 aa11.59□□□□□ -0.55
PSEN1-206ENST00000553447 DAND5Q8N907 189 aa11.59□□□□□ -0.55
PSEN1-206ENST00000553447 F8WDY8 70 aa11.58□□□□□ -0.56
PSEN1-206ENST00000553447 PSCAO43653 123 aa11.58□□□□□ -0.56
PSEN1-206ENST00000553447 PFN2P35080 140 aa11.58□□□□□ -0.56
PSEN1-206ENST00000553447 PTTG1IPP53801 180 aa11.58□□□□□ -0.56
PSEN1-206ENST00000553447 LINC00158P58513 81 aa11.58□□□□□ -0.56
PSEN1-206ENST00000553447 Q6ZR54 194 aa11.58□□□□□ -0.56
PSEN1-206ENST00000553447 MUSTN1Q8IVN3 82 aa11.58□□□□□ -0.56
PSEN1-206ENST00000553447 CAMK2N2Q96S95 79 aa11.58□□□□□ -0.56
PSEN1-206ENST00000553447 IFITM1P13164 125 aa11.57□□□□□ -0.56
PSEN1-206ENST00000553447 NPC2P61916 151 aa11.56□□□□□ -0.56
PSEN1-206ENST00000553447 COX17Q14061 63 aa11.56□□□□□ -0.56
PSEN1-206ENST00000553447 MIR7-3HGQ8N6C7 128 aa11.56□□□□□ -0.56
PSEN1-206ENST00000553447 C6orf48Q9UBA6 75 aa11.56□□□□□ -0.56
PSEN1-206ENST00000553447 TRBV30A0A0K0K1B3 111 aa11.55□□□□□ -0.56
PSEN1-206ENST00000553447 A6NDN8 102 aa11.55□□□□□ -0.56
PSEN1-206ENST00000553447 LECT2O14960 151 aa11.55□□□□□ -0.56
PSEN1-206ENST00000553447 C9orf116Q5BN46 136 aaPredicted RBP11.55□□□□□ -0.56
PSEN1-206ENST00000553447 Q6ZRN7 208 aaPredicted RBP11.55□□□□□ -0.56
PSEN1-206ENST00000553447 LINC00308Q8TCZ7 52 aa11.55□□□□□ -0.56
PSEN1-206ENST00000553447 ALMS1Q8TCU4 4167 aa11.55□□□□□ -0.56
PSEN1-206ENST00000553447 TMEM238LA0A1B0GVL6 79 aa11.54□□□□□ -0.56
PSEN1-206ENST00000553447 A6NJY4 79 aa11.54□□□□□ -0.56
PSEN1-206ENST00000553447 RPL24P83731 157 aaKnown RBP11.54□□□□□ -0.56
PSEN1-206ENST00000553447 WFDC2Q14508 124 aa11.54□□□□□ -0.56
PSEN1-206ENST00000553447 LBHQ53QV2 105 aaPredicted RBP11.54□□□□□ -0.56
PSEN1-206ENST00000553447 COL5A1-AS1Q5SY13 56 aa11.54□□□□□ -0.56
PSEN1-206ENST00000553447 Q6ZRU5 148 aa11.54□□□□□ -0.56
PSEN1-206ENST00000553447 EIF4EBP3O60516 100 aaPredicted RBP11.53□□□□□ -0.56
PSEN1-206ENST00000553447 SYCNQ0VAF6 134 aa11.53□□□□□ -0.56
PSEN1-206ENST00000553447 SOSTDC1Q6X4U4 206 aa11.53□□□□□ -0.56
PSEN1-206ENST00000553447 COPS9Q8WXC6 57 aa11.53□□□□□ -0.56
PSEN1-206ENST00000553447 NHP2Q9NX24 153 aaKnown RBP11.53□□□□□ -0.56
PSEN1-206ENST00000553447 A4D1N5 150 aa11.52□□□□□ -0.57
PSEN1-206ENST00000553447 PPDPFQ9H3Y8 114 aa11.52□□□□□ -0.57
PSEN1-206ENST00000553447 DNAH6Q9C0G6 4158 aa11.51□□□□□ -0.57
PSEN1-206ENST00000553447 A0A1B0GWB2 263 aa11.5□□□□□ -0.57
PSEN1-206ENST00000553447 CARD19Q96LW7 228 aa11.5□□□□□ -0.57
PSEN1-206ENST00000553447 LRCOL1A6NCL2 159 aa11.49□□□□□ -0.57
PSEN1-206ENST00000553447 K7ERJ3 54 aa11.49□□□□□ -0.57
PSEN1-206ENST00000553447 SLPIP03973 132 aa11.49□□□□□ -0.57
PSEN1-206ENST00000553447 C14orf177Q52M58 125 aa11.49□□□□□ -0.57
PSEN1-206ENST00000553447 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.48□□□□□ -0.57
PSEN1-206ENST00000553447 RNF151Q2KHN1 245 aa11.48□□□□□ -0.57
PSEN1-206ENST00000553447 CFC1BP0CG36 223 aa11.47□□□□□ -0.57
PSEN1-206ENST00000553447 CFC1P0CG37 223 aa11.47□□□□□ -0.57
PSEN1-206ENST00000553447 SND1-IT1Q9HBX3 110 aa11.47□□□□□ -0.57
PSEN1-206ENST00000553447 DNAH10Q8IVF4 4471 aa11.46□□□□□ -0.57
PSEN1-206ENST00000553447 LOC107984156A0A0G2JMH3 177 aa11.46□□□□□ -0.57
PSEN1-206ENST00000553447 TAX1BP3O14907 124 aa11.46□□□□□ -0.57
PSEN1-206ENST00000553447 C1orf134Q5TEV5 83 aa11.46□□□□□ -0.57
PSEN1-206ENST00000553447 ARL17AQ8IVW1 177 aa11.46□□□□□ -0.57
PSEN1-206ENST00000553447 A0A0B4J2C4 111 aa11.45□□□□□ -0.58
PSEN1-206ENST00000553447 NDUFC2-KCTD14E9PQ53 114 aa11.44□□□□□ -0.58
PSEN1-206ENST00000553447 CNBPP62633 177 aaKnown RBP11.44□□□□□ -0.58
PSEN1-206ENST00000553447 RAB37Q96AX2 223 aa11.44□□□□□ -0.58
PSEN1-206ENST00000553447 TLX1NBP0CAT3 122 aa11.42□□□□□ -0.58
PSEN1-206ENST00000553447 KMT2AQ03164 3969 aa11.42□□□□□ -0.58
PSEN1-206ENST00000553447 A0A087WTM6 91 aa11.41□□□□□ -0.58
PSEN1-206ENST00000553447 PRO1854Q9UHT4 67 aa11.41□□□□□ -0.58
PSEN1-206ENST00000553447 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.4□□□□□ -0.58
PSEN1-206ENST00000553447 Q6ZRP5 223 aa11.4□□□□□ -0.58
PSEN1-206ENST00000553447 Q8N814 137 aa11.4□□□□□ -0.58
PSEN1-206ENST00000553447 C9orf118A6NHY6 69 aa11.39□□□□□ -0.59
PSEN1-206ENST00000553447 XAGE1AQ9HD64 81 aa11.39□□□□□ -0.59
PSEN1-206ENST00000553447 IGKV2-28A0A075B6P5 120 aa11.38□□□□□ -0.59
PSEN1-206ENST00000553447 NDUFC2O95298 119 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms