RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 AP1S3Q96PC3 154 aa5.7□□□□□ -1.5
TMEM116-217ENST00000552801 MRPL35Q9NZE8 188 aaKnown RBP5.7□□□□□ -1.5
TMEM116-217ENST00000552801 FAT1Q14517 4588 aa5.7□□□□□ -1.5
TMEM116-217ENST00000552801 TRAV26-2A0A0B4J265 109 aa5.69□□□□□ -1.5
TMEM116-217ENST00000552801 GAGE10A6NGK3 116 aa5.69□□□□□ -1.5
TMEM116-217ENST00000552801 PRSS1P07477 247 aa5.69□□□□□ -1.5
TMEM116-217ENST00000552801 NEXN-AS1Q8NBZ9 246 aa5.69□□□□□ -1.5
TMEM116-217ENST00000552801 CIRBP-AS1Q8TBR5 109 aa5.69□□□□□ -1.5
TMEM116-217ENST00000552801 KIF25-AS1Q9Y6Z4 181 aa5.69□□□□□ -1.5
TMEM116-217ENST00000552801 TRBV6-8A0A0A6YYG3 113 aa5.68□□□□□ -1.5
TMEM116-217ENST00000552801 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.68□□□□□ -1.5
TMEM116-217ENST00000552801 H7C1H1 209 aa5.68□□□□□ -1.5
TMEM116-217ENST00000552801 K7ERU9 68 aa5.68□□□□□ -1.5
TMEM116-217ENST00000552801 FXYD2P54710 66 aa5.68□□□□□ -1.5
TMEM116-217ENST00000552801 MIAQ16674 131 aa5.68□□□□□ -1.5
TMEM116-217ENST00000552801 ERASQ7Z444 233 aa5.68□□□□□ -1.5
TMEM116-217ENST00000552801 CEND1Q8N111 149 aa5.68□□□□□ -1.5
TMEM116-217ENST00000552801 Q9UF83 564 aa5.68□□□□□ -1.5
TMEM116-217ENST00000552801 VPS13BQ7Z7G8 4022 aa5.68□□□□□ -1.5
TMEM116-217ENST00000552801 TRBV6-5A0A0K0K1A5 114 aa5.67□□□□□ -1.5
TMEM116-217ENST00000552801 USP17L23D6RBM5 183 aa5.67□□□□□ -1.5
TMEM116-217ENST00000552801 E9PLD3 99 aa5.67□□□□□ -1.5
TMEM116-217ENST00000552801 H3BUT2 72 aa5.67□□□□□ -1.5
TMEM116-217ENST00000552801 UBE2D3P61077 147 aa5.67□□□□□ -1.5
TMEM116-217ENST00000552801 UBE2D2P62837 147 aa5.67□□□□□ -1.5
TMEM116-217ENST00000552801 DNAJC30Q96LL9 226 aa5.67□□□□□ -1.5
TMEM116-217ENST00000552801 SPCS1Q9Y6A9 102 aa5.67□□□□□ -1.5
TMEM116-217ENST00000552801 SMIM13P0DJ93 91 aa5.67□□□□□ -1.5
TMEM116-217ENST00000552801 FABP2P12104 132 aa5.67□□□□□ -1.5
TMEM116-217ENST00000552801 PCP4P48539 62 aa5.67□□□□□ -1.5
TMEM116-217ENST00000552801 DGAT2L7PQ6IED9 249 aa5.67□□□□□ -1.5
TMEM116-217ENST00000552801 KRTAP4-7Q9BYR0 210 aa5.67□□□□□ -1.5
TMEM116-217ENST00000552801 CHTOPQ9Y3Y2 248 aaKnown RBP5.67□□□□□ -1.5
TMEM116-217ENST00000552801 MYCBP2O75592 4640 aa5.66□□□□□ -1.5
TMEM116-217ENST00000552801 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.66□□□□□ -1.5
TMEM116-217ENST00000552801 MYMXA0A1B0GTQ4 84 aa5.66□□□□□ -1.5
TMEM116-217ENST00000552801 GAGE6Q13070 117 aa5.66□□□□□ -1.5
TMEM116-217ENST00000552801 CLPSL2Q6UWE3 100 aa5.66□□□□□ -1.5
TMEM116-217ENST00000552801 C2orf66Q6UXQ4 117 aa5.66□□□□□ -1.5
TMEM116-217ENST00000552801 RPL39LQ96EH5 51 aaKnown RBP5.66□□□□□ -1.5
TMEM116-217ENST00000552801 SCGB3A1Q96QR1 104 aa5.66□□□□□ -1.5
TMEM116-217ENST00000552801 TIMM17AQ99595 171 aa5.66□□□□□ -1.5
TMEM116-217ENST00000552801 TTTY13Q9BZ97 58 aa5.66□□□□□ -1.5
TMEM116-217ENST00000552801 TRBV27A0A0K0K1C4 114 aa5.65□□□□□ -1.51
TMEM116-217ENST00000552801 IGIPA6NJ69 53 aa5.65□□□□□ -1.51
TMEM116-217ENST00000552801 MGPP08493 103 aa5.65□□□□□ -1.51
TMEM116-217ENST00000552801 POLR2KP53803 58 aaKnown RBP5.65□□□□□ -1.51
TMEM116-217ENST00000552801 PAPPA-AS1Q5QFB9 102 aa5.65□□□□□ -1.51
TMEM116-217ENST00000552801 ENHOQ6UWT2 76 aa5.65□□□□□ -1.51
TMEM116-217ENST00000552801 LINC00269Q8N2A0 174 aa5.65□□□□□ -1.51
TMEM116-217ENST00000552801 TMEM141Q96I45 108 aa5.65□□□□□ -1.51
TMEM116-217ENST00000552801 CYSLTR1Q9Y271 337 aa5.65□□□□□ -1.51
TMEM116-217ENST00000552801 IGLV4-69A0A075B6H9 119 aa5.64□□□□□ -1.51
TMEM116-217ENST00000552801 K7ERJ3 54 aa5.64□□□□□ -1.51
TMEM116-217ENST00000552801 UBE2L6O14933 153 aa5.64□□□□□ -1.51
TMEM116-217ENST00000552801 RNF151Q2KHN1 245 aa5.64□□□□□ -1.51
TMEM116-217ENST00000552801 SUMO4Q6EEV6 95 aa5.64□□□□□ -1.51
TMEM116-217ENST00000552801 IGLV10-54A0A075B6I4 117 aa5.63□□□□□ -1.51
TMEM116-217ENST00000552801 TSHBP01222 138 aa5.63□□□□□ -1.51
TMEM116-217ENST00000552801 NHP2Q9NX24 153 aaKnown RBP5.63□□□□□ -1.51
TMEM116-217ENST00000552801 IGHV3-64A0A075B6Q5 118 aa5.62□□□□□ -1.51
TMEM116-217ENST00000552801 TRAV8-4A0A0B4J246 113 aa5.62□□□□□ -1.51
TMEM116-217ENST00000552801 C11orf86A6NJI1 115 aa5.62□□□□□ -1.51
TMEM116-217ENST00000552801 VCYO14598 125 aa5.62□□□□□ -1.51
TMEM116-217ENST00000552801 UBE2D1P51668 147 aa5.62□□□□□ -1.51
TMEM116-217ENST00000552801 REG3AQ06141 175 aa5.62□□□□□ -1.51
TMEM116-217ENST00000552801 PMVKQ15126 192 aa5.62□□□□□ -1.51
TMEM116-217ENST00000552801 C9orf163Q8N9P6 203 aa5.62□□□□□ -1.51
TMEM116-217ENST00000552801 RAB37Q96AX2 223 aa5.62□□□□□ -1.51
TMEM116-217ENST00000552801 VPS25Q9BRG1 176 aa5.62□□□□□ -1.51
TMEM116-217ENST00000552801 SPANXB1Q9NS25 103 aaPredicted RBP5.62□□□□□ -1.51
TMEM116-217ENST00000552801 HERVK_113P61574 105 aa5.61□□□□□ -1.51
TMEM116-217ENST00000552801 COTL1Q14019 142 aa5.61□□□□□ -1.51
TMEM116-217ENST00000552801 CFAP161Q6P656 301 aa5.61□□□□□ -1.51
TMEM116-217ENST00000552801 C7orf33Q8WU49 177 aa5.61□□□□□ -1.51
TMEM116-217ENST00000552801 KIR2DL4Q99706 377 aa5.61□□□□□ -1.51
TMEM116-217ENST00000552801 NAA38Q9BRA0 125 aaKnown RBP5.61□□□□□ -1.51
TMEM116-217ENST00000552801 TMEM243Q9BU79 118 aa5.61□□□□□ -1.51
TMEM116-217ENST00000552801 PRO0461Q9UI25 63 aa5.61□□□□□ -1.51
TMEM116-217ENST00000552801 F8W1H4 67 aa5.6□□□□□ -1.51
TMEM116-217ENST00000552801 M0QY20 66 aa5.6□□□□□ -1.51
TMEM116-217ENST00000552801 AMELXQ99217 191 aa5.6□□□□□ -1.51
TMEM116-217ENST00000552801 HIST1H4GQ99525 98 aa5.6□□□□□ -1.51
TMEM116-217ENST00000552801 SDHAF1A6NFY7 115 aa5.59□□□□□ -1.51
TMEM116-217ENST00000552801 ZNF815PA8K554 130 aa5.59□□□□□ -1.51
TMEM116-217ENST00000552801 Q6ZRU5 148 aa5.59□□□□□ -1.51
TMEM116-217ENST00000552801 PRR34Q9NV39 138 aa5.59□□□□□ -1.51
TMEM116-217ENST00000552801 IGKV3OR2-268A0A0C4DH90 116 aa5.58□□□□□ -1.52
TMEM116-217ENST00000552801 KRTAP10-4P60372 401 aaPredicted RBP5.58□□□□□ -1.52
TMEM116-217ENST00000552801 NTM-AS1Q6ZSK4 140 aa5.58□□□□□ -1.52
TMEM116-217ENST00000552801 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
TMEM116-217ENST00000552801 DNAH8Q96JB1 4490 aa5.57□□□□□ -1.52
TMEM116-217ENST00000552801 TSPEAR-AS2P59090 65 aa5.57□□□□□ -1.52
TMEM116-217ENST00000552801 CNBPP62633 177 aaKnown RBP5.57□□□□□ -1.52
TMEM116-217ENST00000552801 LYRM7Q5U5X0 104 aa5.57□□□□□ -1.52
TMEM116-217ENST00000552801 SDIM1Q6ZPB5 146 aa5.57□□□□□ -1.52
TMEM116-217ENST00000552801 C20orf203Q8NBC4 194 aa5.57□□□□□ -1.52
TMEM116-217ENST00000552801 PLEKHB2Q96CS7 222 aa5.57□□□□□ -1.52
TMEM116-217ENST00000552801 PKIGQ9Y2B9 76 aa5.57□□□□□ -1.52
TMEM116-217ENST00000552801 PYGO1Q9Y3Y4 419 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms