RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 SMIM13P0DJ93 91 aa8.49□□□□□ -1.05
CACNB3-223ENST00000552480 SPAG11BQ08648 103 aa8.49□□□□□ -1.05
CACNB3-223ENST00000552480 MUSTN1Q8IVN3 82 aa8.49□□□□□ -1.05
CACNB3-223ENST00000552480 COL7A1Q02388 2944 aa8.48□□□□□ -1.05
CACNB3-223ENST00000552480 MEGF8Q7Z7M0 2845 aa8.48□□□□□ -1.05
CACNB3-223ENST00000552480 A0A1B0GV90 55 aa8.48□□□□□ -1.05
CACNB3-223ENST00000552480 CKS1BP61024 79 aa8.48□□□□□ -1.05
CACNB3-223ENST00000552480 RPL24P83731 157 aaKnown RBP8.48□□□□□ -1.05
CACNB3-223ENST00000552480 RMI2Q96E14 147 aa8.48□□□□□ -1.05
CACNB3-223ENST00000552480 Q9HAA7 133 aa8.48□□□□□ -1.05
CACNB3-223ENST00000552480 COPS9Q8WXC6 57 aa8.47□□□□□ -1.05
CACNB3-223ENST00000552480 PRKDCP78527 4128 aaKnown RBP8.46□□□□□ -1.05
CACNB3-223ENST00000552480 K7ERJ3 54 aa8.46□□□□□ -1.06
CACNB3-223ENST00000552480 C2orf82Q6UX34 121 aa8.46□□□□□ -1.06
CACNB3-223ENST00000552480 DAND5Q8N907 189 aa8.46□□□□□ -1.06
CACNB3-223ENST00000552480 PPDPFQ9H3Y8 114 aa8.46□□□□□ -1.06
CACNB3-223ENST00000552480 ERG28Q9UKR5 140 aa8.46□□□□□ -1.06
CACNB3-223ENST00000552480 COX11Q9Y6N1 276 aa8.46□□□□□ -1.06
CACNB3-223ENST00000552480 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.45□□□□□ -1.06
CACNB3-223ENST00000552480 A0A0U1RRA0 63 aa8.45□□□□□ -1.06
CACNB3-223ENST00000552480 A4D1N5 150 aa8.45□□□□□ -1.06
CACNB3-223ENST00000552480 LINC00308Q8TCZ7 52 aa8.45□□□□□ -1.06
CACNB3-223ENST00000552480 C9orf118A6NHY6 69 aa8.44□□□□□ -1.06
CACNB3-223ENST00000552480 LINC00158P58513 81 aa8.44□□□□□ -1.06
CACNB3-223ENST00000552480 NPC2P61916 151 aa8.44□□□□□ -1.06
CACNB3-223ENST00000552480 C6orf223Q8N319 242 aa8.44□□□□□ -1.06
CACNB3-223ENST00000552480 C15orf56Q8N910 161 aa8.44□□□□□ -1.06
CACNB3-223ENST00000552480 NTN5Q8WTR8 489 aaPredicted RBP8.44□□□□□ -1.06
CACNB3-223ENST00000552480 RAB37Q96AX2 223 aa8.44□□□□□ -1.06
CACNB3-223ENST00000552480 A0A0B4J2C4 111 aa8.43□□□□□ -1.06
CACNB3-223ENST00000552480 ZNF561-AS1K7EIQ3 104 aa8.43□□□□□ -1.06
CACNB3-223ENST00000552480 CFC1BP0CG36 223 aa8.43□□□□□ -1.06
CACNB3-223ENST00000552480 CFC1P0CG37 223 aa8.43□□□□□ -1.06
CACNB3-223ENST00000552480 PFN2P35080 140 aa8.43□□□□□ -1.06
CACNB3-223ENST00000552480 COX17Q14061 63 aa8.43□□□□□ -1.06
CACNB3-223ENST00000552480 MIR7-3HGQ8N6C7 128 aa8.43□□□□□ -1.06
CACNB3-223ENST00000552480 MUC7Q8TAX7 377 aa8.43□□□□□ -1.06
CACNB3-223ENST00000552480 DNAH7Q8WXX0 4024 aa8.43□□□□□ -1.06
CACNB3-223ENST00000552480 STAB2Q8WWQ8 2551 aa8.43□□□□□ -1.06
CACNB3-223ENST00000552480 GVQW2A0A096LPI5 108 aaPredicted RBP8.42□□□□□ -1.06
CACNB3-223ENST00000552480 F8WDY8 70 aa8.42□□□□□ -1.06
CACNB3-223ENST00000552480 HIGD2BQ4VC39 106 aa8.42□□□□□ -1.06
CACNB3-223ENST00000552480 UNQ6190/PRO20217Q6UXQ8 127 aa8.42□□□□□ -1.06
CACNB3-223ENST00000552480 SOSTDC1Q6X4U4 206 aa8.42□□□□□ -1.06
CACNB3-223ENST00000552480 C2orf48Q96LS8 159 aa8.42□□□□□ -1.06
CACNB3-223ENST00000552480 KRTAP1-5Q9BYS1 174 aa8.42□□□□□ -1.06
CACNB3-223ENST00000552480 EIF4EBP3O60516 100 aaPredicted RBP8.41□□□□□ -1.06
CACNB3-223ENST00000552480 TTC32Q5I0X7 151 aa8.41□□□□□ -1.06
CACNB3-223ENST00000552480 C10orf25Q5T742 122 aa8.41□□□□□ -1.06
CACNB3-223ENST00000552480 LINC00526Q96FQ7 95 aa8.41□□□□□ -1.06
CACNB3-223ENST00000552480 TRBV30A0A0K0K1B3 111 aa8.4□□□□□ -1.06
CACNB3-223ENST00000552480 H3BUT2 72 aa8.4□□□□□ -1.06
CACNB3-223ENST00000552480 CAMK2N2Q96S95 79 aa8.4□□□□□ -1.06
CACNB3-223ENST00000552480 WWC2-AS2Q96NR7 200 aa8.39□□□□□ -1.07
CACNB3-223ENST00000552480 PGPEP1Q9NXJ5 209 aa8.39□□□□□ -1.07
CACNB3-223ENST00000552480 PRO1854Q9UHT4 67 aa8.39□□□□□ -1.07
CACNB3-223ENST00000552480 NBDYA0A0U1RRE5 68 aa8.38□□□□□ -1.07
CACNB3-223ENST00000552480 USP17L23D6RBM5 183 aa8.38□□□□□ -1.07
CACNB3-223ENST00000552480 C9orf116Q5BN46 136 aaPredicted RBP8.38□□□□□ -1.07
CACNB3-223ENST00000552480 CASC10Q5T4H9 136 aa8.38□□□□□ -1.07
CACNB3-223ENST00000552480 NAA38Q9BRA0 125 aaKnown RBP8.38□□□□□ -1.07
CACNB3-223ENST00000552480 C6orf48Q9UBA6 75 aa8.38□□□□□ -1.07
CACNB3-223ENST00000552480 LOC107984156A0A0G2JMH3 177 aa8.37□□□□□ -1.07
CACNB3-223ENST00000552480 A0A1W2PPM0 123 aa8.37□□□□□ -1.07
CACNB3-223ENST00000552480 TSPAN13O95857 204 aa8.37□□□□□ -1.07
CACNB3-223ENST00000552480 ARL17AQ8IVW1 177 aa8.37□□□□□ -1.07
CACNB3-223ENST00000552480 DNAH1Q9P2D7 4330 aa8.37□□□□□ -1.07
CACNB3-223ENST00000552480 VAMP3Q15836 100 aa8.36□□□□□ -1.07
CACNB3-223ENST00000552480 Q6ZRU5 148 aa8.36□□□□□ -1.07
CACNB3-223ENST00000552480 SND1-IT1Q9HBX3 110 aa8.36□□□□□ -1.07
CACNB3-223ENST00000552480 FABP2P12104 132 aa8.35□□□□□ -1.07
CACNB3-223ENST00000552480 SYCNQ0VAF6 134 aa8.35□□□□□ -1.07
CACNB3-223ENST00000552480 CSMD3Q7Z407 3707 aa8.34□□□□□ -1.07
CACNB3-223ENST00000552480 PSCAO43653 123 aa8.34□□□□□ -1.07
CACNB3-223ENST00000552480 RNF151Q2KHN1 245 aa8.34□□□□□ -1.07
CACNB3-223ENST00000552480 STARD9Q9P2P6 4700 aa8.33□□□□□ -1.08
CACNB3-223ENST00000552480 PLECQ15149 4684 aaKnown RBP8.33□□□□□ -1.08
CACNB3-223ENST00000552480 RPL13AP40429 203 aaKnown RBP8.33□□□□□ -1.08
CACNB3-223ENST00000552480 CARD19Q96LW7 228 aa8.33□□□□□ -1.08
CACNB3-223ENST00000552480 TRAV13-2A0A0B4J235 113 aa8.32□□□□□ -1.08
CACNB3-223ENST00000552480 NDUFC2O95298 119 aa8.32□□□□□ -1.08
CACNB3-223ENST00000552480 Q1RN00 199 aa8.32□□□□□ -1.08
CACNB3-223ENST00000552480 IGKV2-28A0A075B6P5 120 aa8.31□□□□□ -1.08
CACNB3-223ENST00000552480 H7C2G1 150 aa8.31□□□□□ -1.08
CACNB3-223ENST00000552480 K7EP34 96 aa8.31□□□□□ -1.08
CACNB3-223ENST00000552480 LECT2O14960 151 aa8.31□□□□□ -1.08
CACNB3-223ENST00000552480 IGKV2D-28P01615 120 aa8.31□□□□□ -1.08
CACNB3-223ENST00000552480 LYRM7Q5U5X0 104 aa8.31□□□□□ -1.08
CACNB3-223ENST00000552480 SPCS1Q9Y6A9 102 aa8.31□□□□□ -1.08
CACNB3-223ENST00000552480 GAGE10A6NGK3 116 aa8.3□□□□□ -1.08
CACNB3-223ENST00000552480 NDUFC2-KCTD14E9PQ53 114 aa8.3□□□□□ -1.08
CACNB3-223ENST00000552480 C3orf84H3BNL1 204 aa8.3□□□□□ -1.08
CACNB3-223ENST00000552480 UBE2V1Q13404 147 aa8.3□□□□□ -1.08
CACNB3-223ENST00000552480 C14orf177Q52M58 125 aa8.3□□□□□ -1.08
CACNB3-223ENST00000552480 GTF2H5Q6ZYL4 71 aa8.3□□□□□ -1.08
CACNB3-223ENST00000552480 SLPIP03973 132 aa8.29□□□□□ -1.08
CACNB3-223ENST00000552480 TLX1NBP0CAT3 122 aa8.29□□□□□ -1.08
CACNB3-223ENST00000552480 PSMB2P49721 201 aa8.29□□□□□ -1.08
CACNB3-223ENST00000552480 WFDC2Q14508 124 aa8.29□□□□□ -1.08
CACNB3-223ENST00000552480 Q6ZR54 194 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms