RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	IGHV3-64	A0A075B6Q5	118 aa		4.25	□□□□□ -1.73
CNOT2-238	ENST00000552422	APOM	O95445	188 aa		4.25	□□□□□ -1.73
CNOT2-238	ENST00000552422	HBD	P02042	147 aa		4.25	□□□□□ -1.73
CNOT2-238	ENST00000552422	RAB5B	P61020	215 aa		4.25	□□□□□ -1.73
CNOT2-238	ENST00000552422	HAMP	P81172	84 aa		4.25	□□□□□ -1.73
CNOT2-238	ENST00000552422	COX6A2	Q02221	97 aa		4.25	□□□□□ -1.73
CNOT2-238	ENST00000552422	PMCHL1	Q16048	86 aa		4.25	□□□□□ -1.73
CNOT2-238	ENST00000552422	SDIM1	Q6ZPB5	146 aa		4.25	□□□□□ -1.73
CNOT2-238	ENST00000552422	SCX	Q7RTU7	201 aa		4.25	□□□□□ -1.73
CNOT2-238	ENST00000552422	OR10D4P	Q8NGN7	298 aa		4.25	□□□□□ -1.73
CNOT2-238	ENST00000552422	LINC00526	Q96FQ7	95 aa		4.25	□□□□□ -1.73
CNOT2-238	ENST00000552422	CARD19	Q96LW7	228 aa		4.25	□□□□□ -1.73
CNOT2-238	ENST00000552422	CHAC1	Q9BUX1	264 aa		4.25	□□□□□ -1.73
CNOT2-238	ENST00000552422	FLG2	Q5D862	2391 aa	Predicted RBP	4.25	□□□□□ -1.73
CNOT2-238	ENST00000552422	IGLV4-69	A0A075B6H9	119 aa		4.24	□□□□□ -1.73
CNOT2-238	ENST00000552422	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.24	□□□□□ -1.73
CNOT2-238	ENST00000552422	SCO1	O75880	301 aa		4.24	□□□□□ -1.73
CNOT2-238	ENST00000552422	HERVK_113	P63121	156 aa		4.24	□□□□□ -1.73
CNOT2-238	ENST00000552422	SEC11A	P67812	179 aa		4.24	□□□□□ -1.73
CNOT2-238	ENST00000552422	SPAG11B	Q08648	103 aa		4.24	□□□□□ -1.73
CNOT2-238	ENST00000552422	CIRBP	Q14011	172 aa	Known RBP	4.24	□□□□□ -1.73
CNOT2-238	ENST00000552422	PDZD11	Q5EBL8	140 aa		4.24	□□□□□ -1.73
CNOT2-238	ENST00000552422	ORAOV1	Q8WV07	137 aa		4.24	□□□□□ -1.73
CNOT2-238	ENST00000552422	CHCHD1	Q96BP2	118 aa	Known RBP	4.24	□□□□□ -1.73
CNOT2-238	ENST00000552422	C2orf48	Q96LS8	159 aa		4.24	□□□□□ -1.73
CNOT2-238	ENST00000552422	CST9L	Q9H4G1	147 aa		4.24	□□□□□ -1.73
CNOT2-238	ENST00000552422	MYCBP2	O75592	4640 aa		4.23	□□□□□ -1.73
CNOT2-238	ENST00000552422	TINCR	A0A1B0GVN0	87 aa		4.23	□□□□□ -1.73
CNOT2-238	ENST00000552422	PANO1	I0J062	215 aa		4.23	□□□□□ -1.73
CNOT2-238	ENST00000552422	SYCN	Q0VAF6	134 aa		4.23	□□□□□ -1.73
CNOT2-238	ENST00000552422	PMVK	Q15126	192 aa		4.23	□□□□□ -1.73
CNOT2-238	ENST00000552422	KRTAP5-11	Q6L8G4	156 aa		4.23	□□□□□ -1.73
CNOT2-238	ENST00000552422	LINC01561	Q8N1V8	128 aa		4.23	□□□□□ -1.73
CNOT2-238	ENST00000552422	CIRBP-AS1	Q8TBR5	109 aa		4.23	□□□□□ -1.73
CNOT2-238	ENST00000552422	CDKN2A-AS1	Q9UH64	79 aa		4.23	□□□□□ -1.73
CNOT2-238	ENST00000552422	IGLV5-45	A0A087WSX0	123 aa		4.22	□□□□□ -1.73
CNOT2-238	ENST00000552422		A0A0A0MQY5	61 aa		4.22	□□□□□ -1.73
CNOT2-238	ENST00000552422		A0A0J9YXV3	536 aa		4.22	□□□□□ -1.73
CNOT2-238	ENST00000552422		F8WDY8	70 aa		4.22	□□□□□ -1.73
CNOT2-238	ENST00000552422	SERF1A	O75920	110 aa		4.22	□□□□□ -1.73
CNOT2-238	ENST00000552422	ATP5L	O75964	103 aa		4.22	□□□□□ -1.73
CNOT2-238	ENST00000552422	CHTF8	P0CG12	524 aa		4.22	□□□□□ -1.73
CNOT2-238	ENST00000552422	KIAA0087	Q14695	138 aa		4.22	□□□□□ -1.73
CNOT2-238	ENST00000552422		Q5VSD8	79 aa		4.22	□□□□□ -1.73
CNOT2-238	ENST00000552422		Q6ZRU5	148 aa		4.22	□□□□□ -1.73
CNOT2-238	ENST00000552422	BAGE3	Q86Y29	109 aa		4.22	□□□□□ -1.73
CNOT2-238	ENST00000552422	SPACA4	Q8TDM5	124 aa		4.22	□□□□□ -1.73
CNOT2-238	ENST00000552422	CAMK2N2	Q96S95	79 aa		4.22	□□□□□ -1.73
CNOT2-238	ENST00000552422	GEMIN7	Q9H840	131 aa	Known RBP	4.22	□□□□□ -1.73
CNOT2-238	ENST00000552422	PKIG	Q9Y2B9	76 aa		4.22	□□□□□ -1.73
CNOT2-238	ENST00000552422		A0A096LNI7	61 aa		4.21	□□□□□ -1.74
CNOT2-238	ENST00000552422	SMIM1	B2RUZ4	78 aa		4.21	□□□□□ -1.74
CNOT2-238	ENST00000552422	NDUFA1	O15239	70 aa		4.21	□□□□□ -1.74
CNOT2-238	ENST00000552422	HSBP1	O75506	76 aa		4.21	□□□□□ -1.74
CNOT2-238	ENST00000552422	SMR3B	P02814	79 aa	Predicted RBP	4.21	□□□□□ -1.74
CNOT2-238	ENST00000552422	IGLC3	P0DOY3	106 aa		4.21	□□□□□ -1.74
CNOT2-238	ENST00000552422		Q8IZM0	81 aa		4.21	□□□□□ -1.74
CNOT2-238	ENST00000552422	LINC00469	Q8N7U9	141 aa		4.21	□□□□□ -1.74
CNOT2-238	ENST00000552422	MRPL35	Q9NZE8	188 aa	Known RBP	4.21	□□□□□ -1.74
CNOT2-238	ENST00000552422	PKHD1L1	Q86WI1	4243 aa		4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422		A0A087WYN8	130 aa		4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422	IGKV2-24	A0A0C4DH68	120 aa		4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422	LOC107984640	A0A0U1RRK4	108 aa		4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422	EPM2A	B3EWF7	344 aa		4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422	HIST1H2BK	O60814	126 aa		4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422	HIST1H2BJ	P06899	126 aa		4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422	HIST1H2BO	P23527	126 aa		4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422	HIST1H2BB	P33778	126 aa		4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422	HIST1H2BD	P58876	126 aa		4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422	HIST1H2BC	P62807	126 aa		4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422	HIST2H2BE	Q16778	126 aa		4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422	FAM19A2	Q8N3H0	131 aa		4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422	HIST1H2BH	Q93079	126 aa		4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422	PACRG	Q96M98	296 aa	Predicted RBP	4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422	HIST1H2BN	Q99877	126 aa		4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422	HIST1H2BM	Q99879	126 aa		4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422	LINC00474	Q9P2X8	69 aa		4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422	DMBT1	Q9UGM3	2413 aa	Predicted RBP	4.2	□□□□□ -1.74
CNOT2-238	ENST00000552422	TRAV12-1	A0A0B4J245	112 aa		4.19	□□□□□ -1.74
CNOT2-238	ENST00000552422	TRBV30	A0A0K0K1B3	111 aa		4.19	□□□□□ -1.74
CNOT2-238	ENST00000552422	TLX1NB	P0CAT3	122 aa		4.19	□□□□□ -1.74
CNOT2-238	ENST00000552422	NDUFA6	P56556	154 aa		4.19	□□□□□ -1.74
CNOT2-238	ENST00000552422	C2orf82	Q6UX34	121 aa		4.19	□□□□□ -1.74
CNOT2-238	ENST00000552422	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.19	□□□□□ -1.74
CNOT2-238	ENST00000552422	IFI27L1	Q96BM0	104 aa		4.19	□□□□□ -1.74
CNOT2-238	ENST00000552422	PLAC8	Q9NZF1	115 aa		4.19	□□□□□ -1.74
CNOT2-238	ENST00000552422	C6orf48	Q9UBA6	75 aa		4.19	□□□□□ -1.74
CNOT2-238	ENST00000552422	C11orf86	A6NJI1	115 aa		4.18	□□□□□ -1.74
CNOT2-238	ENST00000552422		H3BRM9	83 aa		4.18	□□□□□ -1.74
CNOT2-238	ENST00000552422	NUPR1	O60356	82 aa		4.18	□□□□□ -1.74
CNOT2-238	ENST00000552422	LEPROTL1	O95214	131 aa		4.18	□□□□□ -1.74
CNOT2-238	ENST00000552422	SPINK8	P0C7L1	97 aa		4.18	□□□□□ -1.74
CNOT2-238	ENST00000552422	ZNF22	P17026	224 aa	Predicted RBP	4.18	□□□□□ -1.74
CNOT2-238	ENST00000552422	CXCL5	P42830	114 aa		4.18	□□□□□ -1.74
CNOT2-238	ENST00000552422	CKS1B	P61024	79 aa		4.18	□□□□□ -1.74
CNOT2-238	ENST00000552422	RPL18A	Q02543	176 aa	Known RBP	4.18	□□□□□ -1.74
CNOT2-238	ENST00000552422	MAJIN	Q3KP22	176 aa		4.18	□□□□□ -1.74
CNOT2-238	ENST00000552422	C6orf226	Q5I0X4	101 aa		4.18	□□□□□ -1.74
CNOT2-238	ENST00000552422	LCE1E	Q5T753	118 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 253.4 ms