RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 ATOX1O00244 68 aa0.09□□□□□ -2.4
USP44-207ENST00000552237 CCL22O00626 93 aa0.09□□□□□ -2.4
USP44-207ENST00000552237 GNGT2O14610 69 aa0.09□□□□□ -2.4
USP44-207ENST00000552237 HSD52Q0P140 79 aa0.09□□□□□ -2.4
USP44-207ENST00000552237 ALKAL2Q6UX46 152 aa0.09□□□□□ -2.4
USP44-207ENST00000552237 DEFB123Q8N688 67 aa0.09□□□□□ -2.4
USP44-207ENST00000552237 C2orf88Q9BSF0 95 aa0.09□□□□□ -2.4
USP44-207ENST00000552237 NSD3Q9BZ95 1437 aa0.09□□□□□ -2.4
USP44-207ENST00000552237 EP300Q09472 2414 aaPredicted RBP0.09□□□□□ -2.4
USP44-207ENST00000552237 SPHKAPQ2M3C7 1700 aa0.09□□□□□ -2.4
USP44-207ENST00000552237 C1orf167Q5SNV9 1468 aa0.09□□□□□ -2.4
USP44-207ENST00000552237 FYCO1Q9BQS8 1478 aa0.09□□□□□ -2.4
USP44-207ENST00000552237 SHROOM2Q13796 1616 aa0.09□□□□□ -2.4
USP44-207ENST00000552237 ZANQ9Y493 2812 aa0.09□□□□□ -2.4
USP44-207ENST00000552237 CELSR1Q9NYQ6 3014 aa0.08□□□□□ -2.4
USP44-207ENST00000552237 CHD6Q8TD26 2715 aa0.08□□□□□ -2.4
USP44-207ENST00000552237 CLTCQ00610 1675 aaKnown RBP0.08□□□□□ -2.4
USP44-207ENST00000552237 SCN7AQ01118 1682 aa0.08□□□□□ -2.4
USP44-207ENST00000552237 CHD1O14646 1710 aa0.08□□□□□ -2.4
USP44-207ENST00000552237 MON2Q7Z3U7 1717 aa0.08□□□□□ -2.4
USP44-207ENST00000552237 PKD1L3Q7Z443 1732 aa0.08□□□□□ -2.4
USP44-207ENST00000552237 A0A0G2JND7 137 aa0.08□□□□□ -2.4
USP44-207ENST00000552237 SPTY2D1-AS1A0A0U1RR47 76 aa0.08□□□□□ -2.4
USP44-207ENST00000552237 LOC100130705A0A1B0GUX0 176 aa0.08□□□□□ -2.4
USP44-207ENST00000552237 C7orf77A4D0Y5 90 aa0.08□□□□□ -2.4
USP44-207ENST00000552237 H0Y9P7 68 aa0.08□□□□□ -2.4
USP44-207ENST00000552237 I3L2K1 104 aa0.08□□□□□ -2.4
USP44-207ENST00000552237 ARMS2P0C7Q2 107 aa0.08□□□□□ -2.4
USP44-207ENST00000552237 SPRR1BP22528 89 aa0.08□□□□□ -2.4
USP44-207ENST00000552237 HMGN3Q15651 99 aa0.08□□□□□ -2.4
USP44-207ENST00000552237 COL5A1-AS1Q5SY13 56 aa0.08□□□□□ -2.4
USP44-207ENST00000552237 PMCHL2Q9BQD1 86 aa0.08□□□□□ -2.4
USP44-207ENST00000552237 KIAA0556O60303 1618 aa0.08□□□□□ -2.4
USP44-207ENST00000552237 PZPP20742 1482 aa0.08□□□□□ -2.4
USP44-207ENST00000552237 FLNBO75369 2602 aaKnown RBP0.08□□□□□ -2.4
USP44-207ENST00000552237 BCORQ6W2J9 1755 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 CC2D2AQ9P2K1 1620 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 CPSF4LA6NMK7 179 aaKnown RBP0.07□□□□□ -2.4
USP44-207ENST00000552237 ATP6V1G2-DDX39BF2Z307 99 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 H0YGG7 62 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 HEPN1Q6WQI6 88 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 C6orf201Q7Z4U5 140 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 SPRR4Q96PI1 79 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 LINC00472Q9H8W2 130 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 LINC00474Q9P2X8 69 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 CACFD1Q9UGQ2 172 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 APLNQ9ULZ1 77 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 NLRP1Q9C000 1473 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 MRC2Q9UBG0 1479 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 RAPGEF2Q9Y4G8 1499 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 C5P01031 1676 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 SHPRHQ149N8 1683 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 ATRQ13535 2644 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 HMGXB3Q12766 1538 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 KNDC1Q76NI1 1749 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 KIAA1551Q9HCM1 1747 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 FMN2Q9NZ56 1722 aa0.07□□□□□ -2.4
USP44-207ENST00000552237 PAPPA2Q9BXP8 1791 aa0.06□□□□□ -2.4
USP44-207ENST00000552237 CLIP1P30622 1438 aa0.06□□□□□ -2.4
USP44-207ENST00000552237 EDC4Q6P2E9 1401 aaKnown RBP0.06□□□□□ -2.4
USP44-207ENST00000552237 IQSEC2Q5JU85 1478 aa0.06□□□□□ -2.4
USP44-207ENST00000552237 MLH3Q9UHC1 1453 aa0.06□□□□□ -2.4
USP44-207ENST00000552237 TRBV25-1A0A075B6N4 114 aa0.06□□□□□ -2.4
USP44-207ENST00000552237 D6R8Y8 96 aa0.06□□□□□ -2.4
USP44-207ENST00000552237 M0R2T5 61 aa0.06□□□□□ -2.4
USP44-207ENST00000552237 CYB5AP00167 134 aa0.06□□□□□ -2.4
USP44-207ENST00000552237 S100A10P60903 97 aa0.06□□□□□ -2.4
USP44-207ENST00000552237 ETDBQ3ZM63 59 aa0.06□□□□□ -2.4
USP44-207ENST00000552237 MUSTN1Q8IVN3 82 aa0.06□□□□□ -2.4
USP44-207ENST00000552237 TRGV9Q99603 122 aa0.06□□□□□ -2.4
USP44-207ENST00000552237 DPY30Q9C005 99 aa0.06□□□□□ -2.4
USP44-207ENST00000552237 ARHGEF5Q12774 1597 aa0.06□□□□□ -2.4
USP44-207ENST00000552237 PDE4DIPQ5VU43 2346 aa0.05□□□□□ -2.4
USP44-207ENST00000552237 KNL1Q8NG31 2342 aa0.05□□□□□ -2.4
USP44-207ENST00000552237 ADGRL2O95490 1459 aa0.05□□□□□ -2.4
USP44-207ENST00000552237 PLEKHH2Q8IVE3 1493 aa0.05□□□□□ -2.4
USP44-207ENST00000552237 CRYBG1Q9Y4K1 1723 aa0.05□□□□□ -2.4
USP44-207ENST00000552237 TENM4Q6N022 2769 aa0.05□□□□□ -2.4
USP44-207ENST00000552237 TULP4Q9NRJ4 1543 aa0.05□□□□□ -2.4
USP44-207ENST00000552237 A0A087WVE0 104 aa0.05□□□□□ -2.4
USP44-207ENST00000552237 TRBV7-7A0A0K0K1E9 115 aa0.05□□□□□ -2.4
USP44-207ENST00000552237 LINC00959A0A1B0GUT2 108 aa0.05□□□□□ -2.4
USP44-207ENST00000552237 hADV29S1A0JD25 119 aa0.05□□□□□ -2.4
USP44-207ENST00000552237 LEPROTL1O95214 131 aa0.05□□□□□ -2.4
USP44-207ENST00000552237 SPRR2DP22532 72 aa0.05□□□□□ -2.4
USP44-207ENST00000552237 FAUP35544 74 aaKnown RBP0.05□□□□□ -2.4
USP44-207ENST00000552237 NMSQ5H8A3 153 aa0.05□□□□□ -2.4
USP44-207ENST00000552237 ACBD7Q8N6N7 88 aa0.05□□□□□ -2.4
USP44-207ENST00000552237 SERP2Q8N6R1 65 aa0.05□□□□□ -2.4
USP44-207ENST00000552237 CDKN2A-AS1Q9UH64 79 aa0.05□□□□□ -2.4
USP44-207ENST00000552237 STAB2Q8WWQ8 2551 aa0.04□□□□□ -2.4
USP44-207ENST00000552237 AKAP12Q02952 1782 aa0.04□□□□□ -2.4
USP44-207ENST00000552237 RGPD4Q7Z3J3 1758 aa0.04□□□□□ -2.4
USP44-207ENST00000552237 BAZ1AQ9NRL2 1556 aaPredicted RBP0.04□□□□□ -2.4
USP44-207ENST00000552237 CACNA1AO00555 2505 aa0.04□□□□□ -2.4
USP44-207ENST00000552237 PEA15Q15121 130 aa0.04□□□□□ -2.4
USP44-207ENST00000552237 DEFB107AQ8IZN7 70 aa0.04□□□□□ -2.4
USP44-207ENST00000552237 Q9H521 79 aa0.04□□□□□ -2.4
USP44-207ENST00000552237 TARBP1Q13395 1621 aaKnown RBP0.04□□□□□ -2.4
USP44-207ENST00000552237 PEG3Q9GZU2 1588 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms