RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 C10orf91Q5T1B1 145 aa3.79□□□□□ -1.8
CCDC65-204ENST00000552188 SDIM1Q6ZPB5 146 aa3.79□□□□□ -1.8
CCDC65-204ENST00000552188 FA2HQ7L5A8 372 aa3.79□□□□□ -1.8
CCDC65-204ENST00000552188 ORAOV1Q8WV07 137 aa3.79□□□□□ -1.8
CCDC65-204ENST00000552188 MAP1LC3CQ9BXW4 147 aa3.79□□□□□ -1.8
CCDC65-204ENST00000552188 TRAPPC1Q9Y5R8 145 aa3.79□□□□□ -1.8
CCDC65-204ENST00000552188 LOC107984640A0A0U1RRK4 108 aa3.78□□□□□ -1.8
CCDC65-204ENST00000552188 LINC01549A6NIU2 74 aa3.78□□□□□ -1.8
CCDC65-204ENST00000552188 CHTF8P0CG12 524 aa3.78□□□□□ -1.8
CCDC65-204ENST00000552188 RPL37AP61513 92 aaKnown RBP3.78□□□□□ -1.8
CCDC65-204ENST00000552188 STPG4Q8N801 248 aa3.78□□□□□ -1.8
CCDC65-204ENST00000552188 OR10D4PQ8NGN7 298 aa3.78□□□□□ -1.8
CCDC65-204ENST00000552188 C7orf33Q8WU49 177 aa3.78□□□□□ -1.8
CCDC65-204ENST00000552188 SCGB3A1Q96QR1 104 aa3.78□□□□□ -1.8
CCDC65-204ENST00000552188 LINC00474Q9P2X8 69 aa3.78□□□□□ -1.8
CCDC65-204ENST00000552188 A0A087WYN8 130 aa3.77□□□□□ -1.81
CCDC65-204ENST00000552188 NDUFA1O15239 70 aa3.77□□□□□ -1.81
CCDC65-204ENST00000552188 PRSS2P07478 247 aa3.77□□□□□ -1.81
CCDC65-204ENST00000552188 SEC11AP67812 179 aa3.77□□□□□ -1.81
CCDC65-204ENST00000552188 RPL18AQ02543 176 aaKnown RBP3.77□□□□□ -1.81
CCDC65-204ENST00000552188 Q6ZRU5 148 aa3.77□□□□□ -1.81
CCDC65-204ENST00000552188 C2orf48Q96LS8 159 aa3.77□□□□□ -1.81
CCDC65-204ENST00000552188 PACRGQ96M98 296 aaPredicted RBP3.77□□□□□ -1.81
CCDC65-204ENST00000552188 KRTAP9-3Q9BYQ3 159 aa3.77□□□□□ -1.81
CCDC65-204ENST00000552188 TOMM7Q9P0U1 55 aa3.77□□□□□ -1.81
CCDC65-204ENST00000552188 A0A096LNI7 61 aa3.76□□□□□ -1.81
CCDC65-204ENST00000552188 IGHV3OR16-9A0A0B4J2B5 98 aa3.76□□□□□ -1.81
CCDC65-204ENST00000552188 PANO1I0J062 215 aa3.76□□□□□ -1.81
CCDC65-204ENST00000552188 NPSP0C0P6 89 aa3.76□□□□□ -1.81
CCDC65-204ENST00000552188 UBE2D1P51668 147 aa3.76□□□□□ -1.81
CCDC65-204ENST00000552188 NDUFA6P56556 154 aa3.76□□□□□ -1.81
CCDC65-204ENST00000552188 RAB5BP61020 215 aa3.76□□□□□ -1.81
CCDC65-204ENST00000552188 HERVK_113P63121 156 aa3.76□□□□□ -1.81
CCDC65-204ENST00000552188 ZC2HC1BQ5TFG8 222 aa3.76□□□□□ -1.81
CCDC65-204ENST00000552188 SPACA4Q8TDM5 124 aa3.76□□□□□ -1.81
CCDC65-204ENST00000552188 TOMM6Q96B49 74 aa3.76□□□□□ -1.81
CCDC65-204ENST00000552188 TIMM17AQ99595 171 aa3.76□□□□□ -1.81
CCDC65-204ENST00000552188 PCLOQ9Y6V0 5065 aa3.76□□□□□ -1.81
CCDC65-204ENST00000552188 A0A087WZ39 114 aa3.75□□□□□ -1.81
CCDC65-204ENST00000552188 A0A0J9YXV3 536 aa3.75□□□□□ -1.81
CCDC65-204ENST00000552188 IGIPA6NJ69 53 aa3.75□□□□□ -1.81
CCDC65-204ENST00000552188 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.75□□□□□ -1.81
CCDC65-204ENST00000552188 LINC00614P0C842 121 aa3.75□□□□□ -1.81
CCDC65-204ENST00000552188 CKS1BP61024 79 aa3.75□□□□□ -1.81
CCDC65-204ENST00000552188 CIRBPQ14011 172 aaKnown RBP3.75□□□□□ -1.81
CCDC65-204ENST00000552188 LINC00242Q5T6M2 205 aa3.75□□□□□ -1.81
CCDC65-204ENST00000552188 LINC01561Q8N1V8 128 aa3.75□□□□□ -1.81
CCDC65-204ENST00000552188 AMELXQ99217 191 aa3.75□□□□□ -1.81
CCDC65-204ENST00000552188 PLAC8Q9NZF1 115 aa3.75□□□□□ -1.81
CCDC65-204ENST00000552188 TMEM238C9JI98 176 aa3.74□□□□□ -1.81
CCDC65-204ENST00000552188 PMVKQ15126 192 aa3.74□□□□□ -1.81
CCDC65-204ENST00000552188 UNQ6190/PRO20217Q6UXQ8 127 aa3.74□□□□□ -1.81
CCDC65-204ENST00000552188 BOD1L2Q8IYS8 172 aa3.74□□□□□ -1.81
CCDC65-204ENST00000552188 FAM104AQ969W3 186 aa3.74□□□□□ -1.81
CCDC65-204ENST00000552188 MRPL35Q9NZE8 188 aaKnown RBP3.74□□□□□ -1.81
CCDC65-204ENST00000552188 ABCA13Q86UQ4 5058 aa3.74□□□□□ -1.81
CCDC65-204ENST00000552188 TRBV30A0A0K0K1B3 111 aa3.73□□□□□ -1.81
CCDC65-204ENST00000552188 TINCRA0A1B0GVN0 87 aa3.73□□□□□ -1.81
CCDC65-204ENST00000552188 H3BRM9 83 aa3.73□□□□□ -1.81
CCDC65-204ENST00000552188 HBDP02042 147 aa3.73□□□□□ -1.81
CCDC65-204ENST00000552188 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
CCDC65-204ENST00000552188 LINC00173Q6ZV60 143 aa3.73□□□□□ -1.81
CCDC65-204ENST00000552188 FAM19A3Q7Z5A8 133 aa3.73□□□□□ -1.81
CCDC65-204ENST00000552188 C18orf32Q8TCD1 76 aa3.73□□□□□ -1.81
CCDC65-204ENST00000552188 CDKN2A-AS1Q9UH64 79 aa3.73□□□□□ -1.81
CCDC65-204ENST00000552188 VPS13BQ7Z7G8 4022 aa3.73□□□□□ -1.81
CCDC65-204ENST00000552188 LINC01546A6NGU7 62 aa3.72□□□□□ -1.81
CCDC65-204ENST00000552188 M0QXV9 152 aa3.72□□□□□ -1.81
CCDC65-204ENST00000552188 ATP5LO75964 103 aa3.72□□□□□ -1.81
CCDC65-204ENST00000552188 PMCHL1Q16048 86 aa3.72□□□□□ -1.81
CCDC65-204ENST00000552188 C9orf116Q5BN46 136 aaPredicted RBP3.72□□□□□ -1.81
CCDC65-204ENST00000552188 C10orf25Q5T742 122 aa3.72□□□□□ -1.81
CCDC65-204ENST00000552188 C2orf82Q6UX34 121 aa3.72□□□□□ -1.81
CCDC65-204ENST00000552188 Q75L30 129 aa3.72□□□□□ -1.81
CCDC65-204ENST00000552188 BAGE3Q86Y29 109 aa3.72□□□□□ -1.81
CCDC65-204ENST00000552188 Q8IZM0 81 aa3.72□□□□□ -1.81
CCDC65-204ENST00000552188 CST9LQ9H4G1 147 aa3.72□□□□□ -1.81
CCDC65-204ENST00000552188 C6orf48Q9UBA6 75 aa3.72□□□□□ -1.81
CCDC65-204ENST00000552188 FAT1Q14517 4588 aa3.71□□□□□ -1.81
CCDC65-204ENST00000552188 HSBP1O75506 76 aa3.71□□□□□ -1.82
CCDC65-204ENST00000552188 TLX1NBP0CAT3 122 aa3.71□□□□□ -1.82
CCDC65-204ENST00000552188 CXCL5P42830 114 aa3.71□□□□□ -1.82
CCDC65-204ENST00000552188 KIAA0087Q14695 138 aa3.71□□□□□ -1.82
CCDC65-204ENST00000552188 PDZD11Q5EBL8 140 aa3.71□□□□□ -1.82
CCDC65-204ENST00000552188 LCE5AQ5TCM9 118 aa3.71□□□□□ -1.82
CCDC65-204ENST00000552188 Q6ZRP5 223 aa3.71□□□□□ -1.82
CCDC65-204ENST00000552188 FAM19A5Q7Z5A7 132 aaPredicted RBP3.71□□□□□ -1.82
CCDC65-204ENST00000552188 CBLN2Q8IUK8 224 aa3.71□□□□□ -1.82
CCDC65-204ENST00000552188 COX7B2Q8TF08 81 aa3.71□□□□□ -1.82
CCDC65-204ENST00000552188 KRTAP9-8Q9BYQ0 159 aa3.71□□□□□ -1.82
CCDC65-204ENST00000552188 A0A1W2PNN7 141 aa3.7□□□□□ -1.82
CCDC65-204ENST00000552188 NDUFC2-KCTD14E9PQ53 114 aa3.7□□□□□ -1.82
CCDC65-204ENST00000552188 F8VRH5 84 aa3.7□□□□□ -1.82
CCDC65-204ENST00000552188 TSPAN13O95857 204 aa3.7□□□□□ -1.82
CCDC65-204ENST00000552188 OXTP01178 125 aa3.7□□□□□ -1.82
CCDC65-204ENST00000552188 SPINK8P0C7L1 97 aa3.7□□□□□ -1.82
CCDC65-204ENST00000552188 S100A1P23297 94 aa3.7□□□□□ -1.82
CCDC65-204ENST00000552188 RPL13AP40429 203 aaKnown RBP3.7□□□□□ -1.82
CCDC65-204ENST00000552188 UBE2BP63146 152 aa3.7□□□□□ -1.82
CCDC65-204ENST00000552188 TMEM170BQ5T4T1 132 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms