RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 TM2D2Q9BX73 214 aa8.03□□□□□ -1.12
CACNB3-213ENST00000550064 SPANXB1Q9NS25 103 aaPredicted RBP8.03□□□□□ -1.12
CACNB3-213ENST00000550064 COX11Q9Y6N1 276 aa8.03□□□□□ -1.12
CACNB3-213ENST00000550064 M0R143 59 aa8.02□□□□□ -1.13
CACNB3-213ENST00000550064 M0R2N4 97 aa8.02□□□□□ -1.13
CACNB3-213ENST00000550064 TIMM17BO60830 172 aa8.02□□□□□ -1.13
CACNB3-213ENST00000550064 SRSF9Q13242 221 aaKnown RBP eCLIP8.02□□□□□ -1.13
CACNB3-213ENST00000550064 TAL2Q16559 108 aa8.02□□□□□ -1.13
CACNB3-213ENST00000550064 ADAMTSL4-AS1Q5T5F5 129 aa8.02□□□□□ -1.13
CACNB3-213ENST00000550064 NTN5Q8WTR8 489 aaPredicted RBP8.02□□□□□ -1.13
CACNB3-213ENST00000550064 SNHG12Q9BXW3 62 aa8.02□□□□□ -1.13
CACNB3-213ENST00000550064 TMEM238C9JI98 176 aa8.01□□□□□ -1.13
CACNB3-213ENST00000550064 EREGO14944 169 aa8.01□□□□□ -1.13
CACNB3-213ENST00000550064 SMIM13P0DJ93 91 aa8.01□□□□□ -1.13
CACNB3-213ENST00000550064 CXCL5P42830 114 aa8.01□□□□□ -1.13
CACNB3-213ENST00000550064 MEIG1Q5JSS6 88 aa8.01□□□□□ -1.13
CACNB3-213ENST00000550064 BVES-AS1Q5T3Y7 98 aa8.01□□□□□ -1.13
CACNB3-213ENST00000550064 SFTA2Q6UW10 78 aa8.01□□□□□ -1.13
CACNB3-213ENST00000550064 GVQW2A0A096LPI5 108 aaPredicted RBP8□□□□□ -1.13
CACNB3-213ENST00000550064 A0A0U1RRA0 63 aa8□□□□□ -1.13
CACNB3-213ENST00000550064 USP17L23D6RBM5 183 aa8□□□□□ -1.13
CACNB3-213ENST00000550064 ZNF561-AS1K7EIQ3 104 aa8□□□□□ -1.13
CACNB3-213ENST00000550064 LY6G6CO95867 125 aa8□□□□□ -1.13
CACNB3-213ENST00000550064 GCSHP23434 173 aa8□□□□□ -1.13
CACNB3-213ENST00000550064 CIRBPQ14011 172 aaKnown RBP8□□□□□ -1.13
CACNB3-213ENST00000550064 BATFQ16520 125 aa8□□□□□ -1.13
CACNB3-213ENST00000550064 C10orf25Q5T742 122 aa8□□□□□ -1.13
CACNB3-213ENST00000550064 UNQ6190/PRO20217Q6UXQ8 127 aa8□□□□□ -1.13
CACNB3-213ENST00000550064 CEND1Q8N111 149 aa8□□□□□ -1.13
CACNB3-213ENST00000550064 LINC00476Q8WZB0 136 aa8□□□□□ -1.13
CACNB3-213ENST00000550064 ALMS1Q8TCU4 4167 aa8□□□□□ -1.13
CACNB3-213ENST00000550064 Q6ZR54 194 aa7.99□□□□□ -1.13
CACNB3-213ENST00000550064 SPANXDQ9BXN6 97 aa7.99□□□□□ -1.13
CACNB3-213ENST00000550064 SPANXCQ9NY87 97 aa7.99□□□□□ -1.13
CACNB3-213ENST00000550064 PSCAO43653 123 aa7.98□□□□□ -1.13
CACNB3-213ENST00000550064 FXYD2P54710 66 aa7.98□□□□□ -1.13
CACNB3-213ENST00000550064 LINC00158P58513 81 aa7.98□□□□□ -1.13
CACNB3-213ENST00000550064 DAND5Q8N907 189 aa7.98□□□□□ -1.13
CACNB3-213ENST00000550064 C2orf48Q96LS8 159 aa7.98□□□□□ -1.13
CACNB3-213ENST00000550064 CAMK2N2Q96S95 79 aa7.98□□□□□ -1.13
CACNB3-213ENST00000550064 ERG28Q9UKR5 140 aa7.98□□□□□ -1.13
CACNB3-213ENST00000550064 LECT2O14960 151 aa7.97□□□□□ -1.13
CACNB3-213ENST00000550064 PFN2P35080 140 aa7.97□□□□□ -1.13
CACNB3-213ENST00000550064 C9orf116Q5BN46 136 aaPredicted RBP7.97□□□□□ -1.13
CACNB3-213ENST00000550064 Q6ZVH6 145 aa7.97□□□□□ -1.13
CACNB3-213ENST00000550064 MUSTN1Q8IVN3 82 aa7.97□□□□□ -1.13
CACNB3-213ENST00000550064 DNAH6Q9C0G6 4158 aa7.97□□□□□ -1.13
CACNB3-213ENST00000550064 LYSTQ99698 3801 aa7.96□□□□□ -1.13
CACNB3-213ENST00000550064 F8WDY8 70 aa7.96□□□□□ -1.14
CACNB3-213ENST00000550064 PTTG1IPP53801 180 aa7.96□□□□□ -1.14
CACNB3-213ENST00000550064 NPC2P61916 151 aa7.96□□□□□ -1.14
CACNB3-213ENST00000550064 WFDC2Q14508 124 aa7.96□□□□□ -1.14
CACNB3-213ENST00000550064 Q6ZRN7 208 aaPredicted RBP7.96□□□□□ -1.14
CACNB3-213ENST00000550064 Q6ZRU5 148 aa7.96□□□□□ -1.14
CACNB3-213ENST00000550064 C6orf48Q9UBA6 75 aa7.96□□□□□ -1.14
CACNB3-213ENST00000550064 EIF4EBP3O60516 100 aaPredicted RBP7.95□□□□□ -1.14
CACNB3-213ENST00000550064 SYCNQ0VAF6 134 aa7.95□□□□□ -1.14
CACNB3-213ENST00000550064 MIR7-3HGQ8N6C7 128 aa7.95□□□□□ -1.14
CACNB3-213ENST00000550064 LINC00308Q8TCZ7 52 aa7.95□□□□□ -1.14
CACNB3-213ENST00000550064 TRBV30A0A0K0K1B3 111 aa7.94□□□□□ -1.14
CACNB3-213ENST00000550064 SLPIP03973 132 aa7.94□□□□□ -1.14
CACNB3-213ENST00000550064 IFITM1P13164 125 aa7.94□□□□□ -1.14
CACNB3-213ENST00000550064 COX17Q14061 63 aa7.94□□□□□ -1.14
CACNB3-213ENST00000550064 SOSTDC1Q6X4U4 206 aa7.94□□□□□ -1.14
CACNB3-213ENST00000550064 DNAH10Q8IVF4 4471 aa7.93□□□□□ -1.14
CACNB3-213ENST00000550064 RPL24P83731 157 aaKnown RBP7.93□□□□□ -1.14
CACNB3-213ENST00000550064 A4D1N5 150 aa7.92□□□□□ -1.14
CACNB3-213ENST00000550064 LRCOL1A6NCL2 159 aa7.92□□□□□ -1.14
CACNB3-213ENST00000550064 A6NDN8 102 aa7.92□□□□□ -1.14
CACNB3-213ENST00000550064 COL5A1-AS1Q5SY13 56 aa7.92□□□□□ -1.14
CACNB3-213ENST00000550064 NHP2Q9NX24 153 aaKnown RBP7.92□□□□□ -1.14
CACNB3-213ENST00000550064 TMEM238LA0A1B0GVL6 79 aa7.91□□□□□ -1.14
CACNB3-213ENST00000550064 A6NJY4 79 aa7.91□□□□□ -1.14
CACNB3-213ENST00000550064 C1orf134Q5TEV5 83 aa7.91□□□□□ -1.14
CACNB3-213ENST00000550064 CARD19Q96LW7 228 aa7.91□□□□□ -1.14
CACNB3-213ENST00000550064 A0A1B0GWB2 263 aa7.9□□□□□ -1.14
CACNB3-213ENST00000550064 J3QL48 77 aa7.9□□□□□ -1.14
CACNB3-213ENST00000550064 K7ERJ3 54 aa7.9□□□□□ -1.14
CACNB3-213ENST00000550064 RNF151Q2KHN1 245 aa7.9□□□□□ -1.14
CACNB3-213ENST00000550064 C14orf177Q52M58 125 aa7.9□□□□□ -1.14
CACNB3-213ENST00000550064 LBHQ53QV2 105 aaPredicted RBP7.9□□□□□ -1.14
CACNB3-213ENST00000550064 COPS9Q8WXC6 57 aa7.9□□□□□ -1.14
CACNB3-213ENST00000550064 PPDPFQ9H3Y8 114 aa7.9□□□□□ -1.14
CACNB3-213ENST00000550064 DNAH2Q9P225 4427 aa7.89□□□□□ -1.15
CACNB3-213ENST00000550064 CFC1BP0CG36 223 aa7.89□□□□□ -1.15
CACNB3-213ENST00000550064 CFC1P0CG37 223 aa7.89□□□□□ -1.15
CACNB3-213ENST00000550064 SND1-IT1Q9HBX3 110 aa7.89□□□□□ -1.15
CACNB3-213ENST00000550064 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.88□□□□□ -1.15
CACNB3-213ENST00000550064 LOC107984156A0A0G2JMH3 177 aa7.88□□□□□ -1.15
CACNB3-213ENST00000550064 TAX1BP3O14907 124 aa7.88□□□□□ -1.15
CACNB3-213ENST00000550064 ARL17AQ8IVW1 177 aa7.88□□□□□ -1.15
CACNB3-213ENST00000550064 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.87□□□□□ -1.15
CACNB3-213ENST00000550064 A0A087WTM6 91 aa7.87□□□□□ -1.15
CACNB3-213ENST00000550064 NDUFC2-KCTD14E9PQ53 114 aa7.87□□□□□ -1.15
CACNB3-213ENST00000550064 CNBPP62633 177 aaKnown RBP7.87□□□□□ -1.15
CACNB3-213ENST00000550064 RAB37Q96AX2 223 aa7.87□□□□□ -1.15
CACNB3-213ENST00000550064 DNAH17Q9UFH2 4485 aa7.87□□□□□ -1.15
CACNB3-213ENST00000550064 A0A0B4J2C4 111 aa7.86□□□□□ -1.15
CACNB3-213ENST00000550064 TLX1NBP0CAT3 122 aa7.86□□□□□ -1.15
CACNB3-213ENST00000550064 LCE6AA0A183 80 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms