RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 TIMM17AQ99595 171 aa9.59□□□□□ -0.87
COX6A1-203ENST00000550009 SMIM1B2RUZ4 78 aa9.58□□□□□ -0.88
COX6A1-203ENST00000550009 H0Y9J4 135 aa9.58□□□□□ -0.88
COX6A1-203ENST00000550009 K7EMI3 77 aa9.57□□□□□ -0.88
COX6A1-203ENST00000550009 CKS1BP61024 79 aa9.57□□□□□ -0.88
COX6A1-203ENST00000550009 UQCC3Q6UW78 93 aa9.57□□□□□ -0.88
COX6A1-203ENST00000550009 COMMD7Q86VX2 200 aa9.57□□□□□ -0.88
COX6A1-203ENST00000550009 C22orf24Q9Y442 160 aa9.57□□□□□ -0.88
COX6A1-203ENST00000550009 LINC01546A6NGU7 62 aa9.56□□□□□ -0.88
COX6A1-203ENST00000550009 NPSP0C0P6 89 aa9.56□□□□□ -0.88
COX6A1-203ENST00000550009 HERVK_113P63121 156 aa9.56□□□□□ -0.88
COX6A1-203ENST00000550009 ERASQ7Z444 233 aa9.56□□□□□ -0.88
COX6A1-203ENST00000550009 DIRC1Q969H9 104 aa9.56□□□□□ -0.88
COX6A1-203ENST00000550009 SEC11CQ9BY50 192 aa9.56□□□□□ -0.88
COX6A1-203ENST00000550009 GEMIN7Q9H840 131 aaKnown RBP9.56□□□□□ -0.88
COX6A1-203ENST00000550009 SPINK8P0C7L1 97 aa9.55□□□□□ -0.88
COX6A1-203ENST00000550009 GNB1LQ9BYB4 327 aa9.55□□□□□ -0.88
COX6A1-203ENST00000550009 MRPL18Q9H0U6 180 aaKnown RBP9.55□□□□□ -0.88
COX6A1-203ENST00000550009 URB1-AS1Q96HZ7 61 aa9.54□□□□□ -0.88
COX6A1-203ENST00000550009 CST9LQ9H4G1 147 aa9.54□□□□□ -0.88
COX6A1-203ENST00000550009 TRAV9-1A0A075B6T8 112 aa9.53□□□□□ -0.88
COX6A1-203ENST00000550009 A0A096LNJ9 63 aa9.53□□□□□ -0.88
COX6A1-203ENST00000550009 F8VRH5 84 aa9.53□□□□□ -0.88
COX6A1-203ENST00000550009 FABP9Q0Z7S8 132 aa9.53□□□□□ -0.88
COX6A1-203ENST00000550009 IGLV5-45A0A087WSX0 123 aa9.52□□□□□ -0.89
COX6A1-203ENST00000550009 TINCRA0A1B0GVN0 87 aa9.52□□□□□ -0.89
COX6A1-203ENST00000550009 SCO1O75880 301 aa9.52□□□□□ -0.89
COX6A1-203ENST00000550009 C10orf91Q5T1B1 145 aa9.52□□□□□ -0.89
COX6A1-203ENST00000550009 COX7B2Q8TF08 81 aa9.52□□□□□ -0.89
COX6A1-203ENST00000550009 RPS10P5Q9NQ39 176 aa9.52□□□□□ -0.89
COX6A1-203ENST00000550009 RAB5BP61020 215 aa9.51□□□□□ -0.89
COX6A1-203ENST00000550009 PMCHL1Q16048 86 aa9.51□□□□□ -0.89
COX6A1-203ENST00000550009 RPL37AP8A6NKH3 93 aa9.5□□□□□ -0.89
COX6A1-203ENST00000550009 S100PP25815 95 aa9.5□□□□□ -0.89
COX6A1-203ENST00000550009 SEC11AP67812 179 aa9.5□□□□□ -0.89
COX6A1-203ENST00000550009 PAPPA-AS1Q5QFB9 102 aa9.5□□□□□ -0.89
COX6A1-203ENST00000550009 GAGE10A6NGK3 116 aa9.49□□□□□ -0.89
COX6A1-203ENST00000550009 PDZD11Q5EBL8 140 aa9.49□□□□□ -0.89
COX6A1-203ENST00000550009 FA2HQ7L5A8 372 aa9.49□□□□□ -0.89
COX6A1-203ENST00000550009 PMVKQ15126 192 aa9.48□□□□□ -0.89
COX6A1-203ENST00000550009 LINC00167Q96N53 147 aa9.48□□□□□ -0.89
COX6A1-203ENST00000550009 CARHSP1Q9Y2V2 147 aaKnown RBP9.48□□□□□ -0.89
COX6A1-203ENST00000550009 ZNF861PO60384 105 aa9.47□□□□□ -0.89
COX6A1-203ENST00000550009 G0S2P27469 103 aa9.47□□□□□ -0.89
COX6A1-203ENST00000550009 MRPL55Q7Z7F7 128 aaKnown RBP9.47□□□□□ -0.89
COX6A1-203ENST00000550009 C18orf32Q8TCD1 76 aa9.47□□□□□ -0.89
COX6A1-203ENST00000550009 NDUFA6P56556 154 aa9.46□□□□□ -0.9
COX6A1-203ENST00000550009 SMCO4Q9NRQ5 59 aa9.46□□□□□ -0.9
COX6A1-203ENST00000550009 ANAPC11Q9NYG5 84 aa9.46□□□□□ -0.9
COX6A1-203ENST00000550009 IGLV1-50A0A075B6I6 118 aa9.45□□□□□ -0.9
COX6A1-203ENST00000550009 ZNF22P17026 224 aaPredicted RBP9.45□□□□□ -0.9
COX6A1-203ENST00000550009 CXCL5P42830 114 aa9.45□□□□□ -0.9
COX6A1-203ENST00000550009 Q8NDZ9 215 aa9.45□□□□□ -0.9
COX6A1-203ENST00000550009 A0A087X002 238 aa9.44□□□□□ -0.9
COX6A1-203ENST00000550009 IGLC3P0DOY3 106 aa9.44□□□□□ -0.9
COX6A1-203ENST00000550009 RHEBQ15382 184 aa9.44□□□□□ -0.9
COX6A1-203ENST00000550009 TRAPPC1Q9Y5R8 145 aa9.44□□□□□ -0.9
COX6A1-203ENST00000550009 PFN2P35080 140 aa9.43□□□□□ -0.9
COX6A1-203ENST00000550009 TP73-AS1Q9UF72 201 aa9.43□□□□□ -0.9
COX6A1-203ENST00000550009 IGLV5-39A0A0G2JS06 123 aa9.42□□□□□ -0.9
COX6A1-203ENST00000550009 NUPR1O60356 82 aa9.42□□□□□ -0.9
COX6A1-203ENST00000550009 LBHQ53QV2 105 aaPredicted RBP9.42□□□□□ -0.9
COX6A1-203ENST00000550009 ZNF625Q96I27 306 aaPredicted RBP9.42□□□□□ -0.9
COX6A1-203ENST00000550009 C11orf86A6NJI1 115 aa9.41□□□□□ -0.9
COX6A1-203ENST00000550009 BCE1O60756 84 aa9.41□□□□□ -0.9
COX6A1-203ENST00000550009 LINC00614P0C842 121 aa9.41□□□□□ -0.9
COX6A1-203ENST00000550009 COX19Q49B96 90 aa9.41□□□□□ -0.9
COX6A1-203ENST00000550009 TSPAN13O95857 204 aa9.4□□□□□ -0.9
COX6A1-203ENST00000550009 APOC3P02656 99 aa9.4□□□□□ -0.9
COX6A1-203ENST00000550009 IGLV5-37A0A075B6J1 123 aa9.39□□□□□ -0.91
COX6A1-203ENST00000550009 IGKV2-28A0A075B6P5 120 aa9.39□□□□□ -0.91
COX6A1-203ENST00000550009 IGKV2D-28P01615 120 aa9.39□□□□□ -0.91
COX6A1-203ENST00000550009 KRTAP13-1Q8IUC0 172 aa9.39□□□□□ -0.91
COX6A1-203ENST00000550009 YPEL4Q96NS1 127 aa9.39□□□□□ -0.91
COX6A1-203ENST00000550009 HBDP02042 147 aa9.38□□□□□ -0.91
COX6A1-203ENST00000550009 LINC01549A6NIU2 74 aa9.37□□□□□ -0.91
COX6A1-203ENST00000550009 H3BRM9 83 aa9.37□□□□□ -0.91
COX6A1-203ENST00000550009 VPREB1P12018 145 aa9.37□□□□□ -0.91
COX6A1-203ENST00000550009 PRR4Q16378 134 aa9.37□□□□□ -0.91
COX6A1-203ENST00000550009 KRTAP13-2Q52LG2 175 aa9.37□□□□□ -0.91
COX6A1-203ENST00000550009 BAGE3Q86Y29 109 aa9.37□□□□□ -0.91
COX6A1-203ENST00000550009 SND1-IT1Q9HBX3 110 aa9.37□□□□□ -0.91
COX6A1-203ENST00000550009 TMEM238C9JI98 176 aa9.36□□□□□ -0.91
COX6A1-203ENST00000550009 ATP5LO75964 103 aa9.36□□□□□ -0.91
COX6A1-203ENST00000550009 RPL28P46779 137 aaKnown RBP9.35□□□□□ -0.91
COX6A1-203ENST00000550009 PRLHP81277 87 aa9.35□□□□□ -0.91
COX6A1-203ENST00000550009 NKAPP1Q8N9T2 125 aa9.35□□□□□ -0.91
COX6A1-203ENST00000550009 ERG28Q9UKR5 140 aa9.35□□□□□ -0.91
COX6A1-203ENST00000550009 MUC2Q02817 5179 aa9.34□□□□□ -0.91
COX6A1-203ENST00000550009 RPL13AP40429 203 aaKnown RBP9.34□□□□□ -0.91
COX6A1-203ENST00000550009 TMEM170BQ5T4T1 132 aa9.34□□□□□ -0.91
COX6A1-203ENST00000550009 A0A0U1RRA0 63 aa9.33□□□□□ -0.92
COX6A1-203ENST00000550009 UBE2AP49459 152 aa9.32□□□□□ -0.92
COX6A1-203ENST00000550009 CHTOPQ9Y3Y2 248 aaKnown RBP9.31□□□□□ -0.92
COX6A1-203ENST00000550009 M0R378 163 aa9.3□□□□□ -0.92
COX6A1-203ENST00000550009 SNAPINO95295 136 aa9.3□□□□□ -0.92
COX6A1-203ENST00000550009 CBLN2Q8IUK8 224 aa9.3□□□□□ -0.92
COX6A1-203ENST00000550009 FAM19A2Q8N3H0 131 aa9.3□□□□□ -0.92
COX6A1-203ENST00000550009 TYMSOSQ8TAI1 123 aa9.3□□□□□ -0.92
COX6A1-203ENST00000550009 TMEM126AQ9H061 195 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms