RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 HERV-K104P63124 156 aa7.81□□□□□ -1.16
LINC00661-204ENST00000549354 C9orf116Q5BN46 136 aaPredicted RBP7.81□□□□□ -1.16
LINC00661-204ENST00000549354 CSMD3Q7Z407 3707 aa7.8□□□□□ -1.16
LINC00661-204ENST00000549354 C6orf226Q5I0X4 101 aa7.8□□□□□ -1.16
LINC00661-204ENST00000549354 SPATA3Q8NHX4 192 aa7.8□□□□□ -1.16
LINC00661-204ENST00000549354 IGKV3D-7A0A0C4DH55 119 aa7.8□□□□□ -1.16
LINC00661-204ENST00000549354 C9orf129Q5T035 196 aaKnown RBP7.8□□□□□ -1.16
LINC00661-204ENST00000549354 TMEM243Q9BU79 118 aa7.8□□□□□ -1.16
LINC00661-204ENST00000549354 M0QXV9 152 aa7.79□□□□□ -1.16
LINC00661-204ENST00000549354 TIRAPP58753 221 aa7.79□□□□□ -1.16
LINC00661-204ENST00000549354 C9orf66Q5T8R8 295 aa7.79□□□□□ -1.16
LINC00661-204ENST00000549354 C14orf132Q9NPU4 83 aa7.79□□□□□ -1.16
LINC00661-204ENST00000549354 LINC00337Q8N6G1 96 aa7.78□□□□□ -1.16
LINC00661-204ENST00000549354 SND1-IT1Q9HBX3 110 aa7.78□□□□□ -1.16
LINC00661-204ENST00000549354 CDC42SE2Q9NRR3 84 aa7.78□□□□□ -1.16
LINC00661-204ENST00000549354 KLK5Q9Y337 293 aaPredicted RBP7.78□□□□□ -1.16
LINC00661-204ENST00000549354 TENM3Q9P273 2699 aa7.78□□□□□ -1.16
LINC00661-204ENST00000549354 CRPP02741 224 aa7.78□□□□□ -1.16
LINC00661-204ENST00000549354 WFDC9Q8NEX5 89 aa7.78□□□□□ -1.16
LINC00661-204ENST00000549354 WIPF1O43516 503 aa7.78□□□□□ -1.16
LINC00661-204ENST00000549354 DNAL4O96015 105 aa7.78□□□□□ -1.16
LINC00661-204ENST00000549354 DEFB135Q30KP9 77 aa7.78□□□□□ -1.16
LINC00661-204ENST00000549354 A0A087WYN8 130 aa7.77□□□□□ -1.17
LINC00661-204ENST00000549354 IGLV5-39A0A0G2JS06 123 aa7.77□□□□□ -1.17
LINC00661-204ENST00000549354 PLAC8L1A1L4L8 177 aa7.77□□□□□ -1.17
LINC00661-204ENST00000549354 GYPEP15421 78 aa7.77□□□□□ -1.17
LINC00661-204ENST00000549354 SDIM1Q6ZPB5 146 aa7.77□□□□□ -1.17
LINC00661-204ENST00000549354 LECT2O14960 151 aa7.77□□□□□ -1.17
LINC00661-204ENST00000549354 OVOL2Q9BRP0 275 aa7.77□□□□□ -1.17
LINC00661-204ENST00000549354 NCR3O14931 201 aa7.76□□□□□ -1.17
LINC00661-204ENST00000549354 C16orf74Q96GX8 76 aa7.76□□□□□ -1.17
LINC00661-204ENST00000549354 IGLV5-45A0A087WSX0 123 aa7.76□□□□□ -1.17
LINC00661-204ENST00000549354 F5H768 121 aa7.75□□□□□ -1.17
LINC00661-204ENST00000549354 TIMM17BO60830 172 aa7.75□□□□□ -1.17
LINC00661-204ENST00000549354 C9orf153Q5TBE3 101 aa7.75□□□□□ -1.17
LINC00661-204ENST00000549354 Q6Q795 121 aa7.75□□□□□ -1.17
LINC00661-204ENST00000549354 SMIM11BQ8TCY0 68 aa7.75□□□□□ -1.17
LINC00661-204ENST00000549354 COX7B2Q8TF08 81 aa7.74□□□□□ -1.17
LINC00661-204ENST00000549354 A0A087WVE0 104 aa7.74□□□□□ -1.17
LINC00661-204ENST00000549354 IGKV2-28A0A075B6P5 120 aa7.73□□□□□ -1.17
LINC00661-204ENST00000549354 IGKV2D-28P01615 120 aa7.73□□□□□ -1.17
LINC00661-204ENST00000549354 ANGP03950 147 aaKnown RBP7.73□□□□□ -1.17
LINC00661-204ENST00000549354 MRPL23Q16540 153 aaKnown RBP7.73□□□□□ -1.17
LINC00661-204ENST00000549354 MALP21145 153 aa7.73□□□□□ -1.17
LINC00661-204ENST00000549354 LINC00269Q8N2A0 174 aa7.73□□□□□ -1.17
LINC00661-204ENST00000549354 C22orf24Q9Y442 160 aa7.73□□□□□ -1.17
LINC00661-204ENST00000549354 CCL18P55774 89 aa7.73□□□□□ -1.17
LINC00661-204ENST00000549354 HIST1H4AP62805 103 aaKnown RBP7.73□□□□□ -1.17
LINC00661-204ENST00000549354 FAM240AA0A1B0GVK7 77 aa7.72□□□□□ -1.17
LINC00661-204ENST00000549354 TENM2Q9NT68 2774 aa7.72□□□□□ -1.17
LINC00661-204ENST00000549354 TRBV10-1A0A0K0K1A3 114 aa7.72□□□□□ -1.17
LINC00661-204ENST00000549354 LINC00612Q8N6U2 182 aa7.71□□□□□ -1.18
LINC00661-204ENST00000549354 KIR2DL5BQ8NHK3 375 aa7.71□□□□□ -1.18
LINC00661-204ENST00000549354 LOC107984640A0A0U1RRK4 108 aa7.7□□□□□ -1.18
LINC00661-204ENST00000549354 LINC00643Q86TS7 51 aa7.7□□□□□ -1.18
LINC00661-204ENST00000549354 TRBV7-7A0A0K0K1E9 115 aa7.7□□□□□ -1.18
LINC00661-204ENST00000549354 SMIM9A6NGZ8 99 aa7.7□□□□□ -1.18
LINC00661-204ENST00000549354 DEFB121Q5J5C9 76 aa7.7□□□□□ -1.18
LINC00661-204ENST00000549354 TRAV13-2A0A0B4J235 113 aa7.7□□□□□ -1.18
LINC00661-204ENST00000549354 TRACP01848 142 aa7.7□□□□□ -1.18
LINC00661-204ENST00000549354 FAM222AQ5U5X8 452 aa7.69□□□□□ -1.18
LINC00661-204ENST00000549354 C6orf223Q8N319 242 aa7.69□□□□□ -1.18
LINC00661-204ENST00000549354 COPS9Q8WXC6 57 aa7.69□□□□□ -1.18
LINC00661-204ENST00000549354 PPDPFQ9H3Y8 114 aa7.69□□□□□ -1.18
LINC00661-204ENST00000549354 KRTAP24-1Q3LI83 254 aa7.69□□□□□ -1.18
LINC00661-204ENST00000549354 X6R8D5 127 aa7.69□□□□□ -1.18
LINC00661-204ENST00000549354 TRBV6-8A0A0A6YYG3 113 aa7.68□□□□□ -1.18
LINC00661-204ENST00000549354 XAGE1AQ9HD64 81 aa7.68□□□□□ -1.18
LINC00661-204ENST00000549354 LINC00846Q9NV44 126 aa7.68□□□□□ -1.18
LINC00661-204ENST00000549354 LINC01600Q96MT4 127 aa7.68□□□□□ -1.18
LINC00661-204ENST00000549354 TRBV6-4A0A1B0GX49 114 aa7.67□□□□□ -1.18
LINC00661-204ENST00000549354 hADV29S1A0JD25 119 aa7.67□□□□□ -1.18
LINC00661-204ENST00000549354 ACYP1P07311 99 aa7.67□□□□□ -1.18
LINC00661-204ENST00000549354 INAFM2P0DMQ5 153 aa7.67□□□□□ -1.18
LINC00661-204ENST00000549354 FHL2Q14192 279 aa7.67□□□□□ -1.18
LINC00661-204ENST00000549354 RPL28P46779 137 aaKnown RBP7.66□□□□□ -1.18
LINC00661-204ENST00000549354 IGHV3OR16-9A0A0B4J2B5 98 aa7.66□□□□□ -1.18
LINC00661-204ENST00000549354 CYSTM1Q9H1C7 97 aa7.66□□□□□ -1.18
LINC00661-204ENST00000549354 CSDC2Q9Y534 153 aaKnown RBP7.66□□□□□ -1.18
LINC00661-204ENST00000549354 CXCL5P42830 114 aa7.65□□□□□ -1.18
LINC00661-204ENST00000549354 APOC4P55056 127 aa7.65□□□□□ -1.18
LINC00661-204ENST00000549354 KLK12Q9UKR0 248 aa7.65□□□□□ -1.18
LINC00661-204ENST00000549354 A0A1B0GX51 115 aa7.65□□□□□ -1.18
LINC00661-204ENST00000549354 C3orf22Q8N5N4 141 aa7.65□□□□□ -1.18
LINC00661-204ENST00000549354 LINC00959A0A1B0GUT2 108 aa7.65□□□□□ -1.19
LINC00661-204ENST00000549354 CYSRT1A8MQ03 144 aa7.64□□□□□ -1.19
LINC00661-204ENST00000549354 HIGD2BQ4VC39 106 aa7.64□□□□□ -1.19
LINC00661-204ENST00000549354 S100A7L2Q5SY68 101 aa7.63□□□□□ -1.19
LINC00661-204ENST00000549354 EGFEM1PQ0D2K5 195 aa7.63□□□□□ -1.19
LINC00661-204ENST00000549354 LYRM9A8MSI8 78 aa7.62□□□□□ -1.19
LINC00661-204ENST00000549354 PRB2P02812 416 aaPredicted RBP7.62□□□□□ -1.19
LINC00661-204ENST00000549354 RPL18AQ02543 176 aaKnown RBP7.62□□□□□ -1.19
LINC00661-204ENST00000549354 SS18Q15532 418 aa7.62□□□□□ -1.19
LINC00661-204ENST00000549354 SCXQ7RTU7 201 aa7.62□□□□□ -1.19
LINC00661-204ENST00000549354 C10orf25Q5T742 122 aa7.62□□□□□ -1.19
LINC00661-204ENST00000549354 UNQ6190/PRO20217Q6UXQ8 127 aa7.62□□□□□ -1.19
LINC00661-204ENST00000549354 RETNQ9HD89 108 aa7.62□□□□□ -1.19
LINC00661-204ENST00000549354 CELA1Q9UNI1 258 aa7.62□□□□□ -1.19
LINC00661-204ENST00000549354 UQCRQO14949 82 aa7.61□□□□□ -1.19
LINC00661-204ENST00000549354 DAD1P61803 113 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms