RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 PAPPA-AS1Q5QFB9 102 aa7.42□□□□□ -1.22
DDX54-206ENST00000549271 SCGB3A1Q96QR1 104 aa7.42□□□□□ -1.22
DDX54-206ENST00000549271 PSORS1C2Q9UIG4 136 aa7.42□□□□□ -1.22
DDX54-206ENST00000549271 APOC3P02656 99 aa7.41□□□□□ -1.22
DDX54-206ENST00000549271 CDKN2A-AS1Q9UH64 79 aa7.41□□□□□ -1.22
DDX54-206ENST00000549271 TRBV30A0A0K0K1B3 111 aa7.4□□□□□ -1.22
DDX54-206ENST00000549271 FAM168BA1KXE4 195 aa7.4□□□□□ -1.22
DDX54-206ENST00000549271 HERVK_113P63121 156 aa7.4□□□□□ -1.22
DDX54-206ENST00000549271 PHF5AQ7RTV0 110 aaKnown RBP7.4□□□□□ -1.22
DDX54-206ENST00000549271 KRTAP7-1Q8IUC3 87 aa7.4□□□□□ -1.22
DDX54-206ENST00000549271 CRCT1Q9UGL9 99 aa7.4□□□□□ -1.22
DDX54-206ENST00000549271 SEC11AP67812 179 aa7.39□□□□□ -1.23
DDX54-206ENST00000549271 GAGE2EQ4V326 116 aa7.39□□□□□ -1.23
DDX54-206ENST00000549271 FA2HQ7L5A8 372 aa7.39□□□□□ -1.23
DDX54-206ENST00000549271 URB1-AS1Q96HZ7 61 aa7.39□□□□□ -1.23
DDX54-206ENST00000549271 GAGE2DQ9UEU5 116 aa7.39□□□□□ -1.23
DDX54-206ENST00000549271 LINC01549A6NIU2 74 aa7.38□□□□□ -1.23
DDX54-206ENST00000549271 SNAPINO95295 136 aa7.38□□□□□ -1.23
DDX54-206ENST00000549271 Q8IZM0 81 aa7.38□□□□□ -1.23
DDX54-206ENST00000549271 SVBPQ8N300 66 aa7.38□□□□□ -1.23
DDX54-206ENST00000549271 C18orf32Q8TCD1 76 aa7.38□□□□□ -1.23
DDX54-206ENST00000549271 CST9LQ9H4G1 147 aa7.38□□□□□ -1.23
DDX54-206ENST00000549271 GEMIN7Q9H840 131 aaKnown RBP7.38□□□□□ -1.23
DDX54-206ENST00000549271 TOMM7Q9P0U1 55 aa7.38□□□□□ -1.23
DDX54-206ENST00000549271 TRAPPC1Q9Y5R8 145 aa7.38□□□□□ -1.23
DDX54-206ENST00000549271 IGLV5-45A0A087WSX0 123 aa7.37□□□□□ -1.23
DDX54-206ENST00000549271 A0A096LNJ9 63 aa7.37□□□□□ -1.23
DDX54-206ENST00000549271 TINCRA0A1B0GVN0 87 aa7.37□□□□□ -1.23
DDX54-206ENST00000549271 NDUFC2-KCTD14E9PQ53 114 aa7.37□□□□□ -1.23
DDX54-206ENST00000549271 C6orf226Q5I0X4 101 aa7.37□□□□□ -1.23
DDX54-206ENST00000549271 C1orf137Q5JT78 98 aa7.37□□□□□ -1.23
DDX54-206ENST00000549271 LCE2DQ5TA82 110 aaPredicted RBP7.37□□□□□ -1.23
DDX54-206ENST00000549271 KRTAP11-1Q8IUC1 163 aa7.37□□□□□ -1.23
DDX54-206ENST00000549271 PACRGQ96M98 296 aaPredicted RBP7.37□□□□□ -1.23
DDX54-206ENST00000549271 YPEL4Q96NS1 127 aa7.37□□□□□ -1.23
DDX54-206ENST00000549271 SMCO4Q9NRQ5 59 aa7.37□□□□□ -1.23
DDX54-206ENST00000549271 IGLV7-43P04211 117 aa7.36□□□□□ -1.23
DDX54-206ENST00000549271 PRSS2P07478 247 aa7.36□□□□□ -1.23
DDX54-206ENST00000549271 PRR4Q16378 134 aa7.36□□□□□ -1.23
DDX54-206ENST00000549271 C9orf129Q5T035 196 aaKnown RBP7.36□□□□□ -1.23
DDX54-206ENST00000549271 LINC00469Q8N7U9 141 aa7.36□□□□□ -1.23
DDX54-206ENST00000549271 DIRC1Q969H9 104 aa7.36□□□□□ -1.23
DDX54-206ENST00000549271 SMIM1B2RUZ4 78 aa7.35□□□□□ -1.23
DDX54-206ENST00000549271 LINC00614P0C842 121 aa7.35□□□□□ -1.23
DDX54-206ENST00000549271 CKS1BP61024 79 aa7.35□□□□□ -1.23
DDX54-206ENST00000549271 PMVKQ15126 192 aa7.35□□□□□ -1.23
DDX54-206ENST00000549271 NDUFA5Q16718 116 aa7.35□□□□□ -1.23
DDX54-206ENST00000549271 FAM19A5Q7Z5A7 132 aaPredicted RBP7.35□□□□□ -1.23
DDX54-206ENST00000549271 PRR26Q8N8Z3 221 aa7.35□□□□□ -1.23
DDX54-206ENST00000549271 PDZD11Q5EBL8 140 aa7.34□□□□□ -1.23
DDX54-206ENST00000549271 F8VRH5 84 aa7.33□□□□□ -1.24
DDX54-206ENST00000549271 H0Y9J4 135 aa7.33□□□□□ -1.24
DDX54-206ENST00000549271 SPINK8P0C7L1 97 aa7.32□□□□□ -1.24
DDX54-206ENST00000549271 PMCHL1Q16048 86 aa7.32□□□□□ -1.24
DDX54-206ENST00000549271 COX7B2Q8TF08 81 aa7.32□□□□□ -1.24
DDX54-206ENST00000549271 IGLV1-50A0A075B6I6 118 aa7.31□□□□□ -1.24
DDX54-206ENST00000549271 M0QXV9 152 aa7.31□□□□□ -1.24
DDX54-206ENST00000549271 HBDP02042 147 aa7.31□□□□□ -1.24
DDX54-206ENST00000549271 IGLC3P0DOY3 106 aa7.31□□□□□ -1.24
DDX54-206ENST00000549271 CXCL5P42830 114 aa7.31□□□□□ -1.24
DDX54-206ENST00000549271 MUC17Q685J3 4493 aa7.3□□□□□ -1.24
DDX54-206ENST00000549271 KRTAP1-4P0C5Y4 121 aa7.3□□□□□ -1.24
DDX54-206ENST00000549271 RAB5BP61020 215 aa7.3□□□□□ -1.24
DDX54-206ENST00000549271 XAGE1AQ9HD64 81 aa7.3□□□□□ -1.24
DDX54-206ENST00000549271 IGLV5-39A0A0G2JS06 123 aa7.29□□□□□ -1.24
DDX54-206ENST00000549271 NDUFA6P56556 154 aa7.29□□□□□ -1.24
DDX54-206ENST00000549271 CBLN2Q8IUK8 224 aa7.29□□□□□ -1.24
DDX54-206ENST00000549271 H3BRM9 83 aa7.28□□□□□ -1.24
DDX54-206ENST00000549271 ZNF22P17026 224 aaPredicted RBP7.28□□□□□ -1.24
DDX54-206ENST00000549271 SLC7A5P1Q8MH63 180 aa7.28□□□□□ -1.24
DDX54-206ENST00000549271 C22orf24Q9Y442 160 aa7.28□□□□□ -1.24
DDX54-206ENST00000549271 ATP5LO75964 103 aa7.27□□□□□ -1.25
DDX54-206ENST00000549271 UBE2BP63146 152 aa7.27□□□□□ -1.25
DDX54-206ENST00000549271 BAGE3Q86Y29 109 aa7.27□□□□□ -1.25
DDX54-206ENST00000549271 C11orf86A6NJI1 115 aa7.26□□□□□ -1.25
DDX54-206ENST00000549271 RPL13AP40429 203 aaKnown RBP7.26□□□□□ -1.25
DDX54-206ENST00000549271 CHCHD1Q96BP2 118 aaKnown RBP7.26□□□□□ -1.25
DDX54-206ENST00000549271 TP73-AS1Q9UF72 201 aa7.25□□□□□ -1.25
DDX54-206ENST00000549271 TRGC2P03986 189 aa7.23□□□□□ -1.25
DDX54-206ENST00000549271 LBHQ53QV2 105 aaPredicted RBP7.23□□□□□ -1.25
DDX54-206ENST00000549271 IFI27L1Q96BM0 104 aa7.23□□□□□ -1.25
DDX54-206ENST00000549271 CHTOPQ9Y3Y2 248 aaKnown RBP7.23□□□□□ -1.25
DDX54-206ENST00000549271 IGLV5-37A0A075B6J1 123 aa7.22□□□□□ -1.25
DDX54-206ENST00000549271 TRAV12-1A0A0B4J245 112 aa7.22□□□□□ -1.25
DDX54-206ENST00000549271 ZNF861PO60384 105 aa7.22□□□□□ -1.25
DDX54-206ENST00000549271 TMEM170BQ5T4T1 132 aa7.22□□□□□ -1.25
DDX54-206ENST00000549271 MRPL55Q7Z7F7 128 aaKnown RBP7.22□□□□□ -1.25
DDX54-206ENST00000549271 FAM19A2Q8N3H0 131 aa7.22□□□□□ -1.25
DDX54-206ENST00000549271 LINC00167Q96N53 147 aa7.22□□□□□ -1.25
DDX54-206ENST00000549271 NUPR1O60356 82 aa7.21□□□□□ -1.26
DDX54-206ENST00000549271 PFN2P35080 140 aa7.21□□□□□ -1.26
DDX54-206ENST00000549271 LINC00310P59036 64 aa7.21□□□□□ -1.26
DDX54-206ENST00000549271 TMEM223A0PJW6 202 aa7.2□□□□□ -1.26
DDX54-206ENST00000549271 RPL37AP8A6NKH3 93 aa7.2□□□□□ -1.26
DDX54-206ENST00000549271 COLCA2A8K830 154 aa7.2□□□□□ -1.26
DDX54-206ENST00000549271 ZNF625Q96I27 306 aaPredicted RBP7.2□□□□□ -1.26
DDX54-206ENST00000549271 ERG28Q9UKR5 140 aa7.2□□□□□ -1.26
DDX54-206ENST00000549271 HSBP1O75506 76 aa7.19□□□□□ -1.26
DDX54-206ENST00000549271 SND1-IT1Q9HBX3 110 aa7.19□□□□□ -1.26
DDX54-206ENST00000549271 GAGE10A6NGK3 116 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms