RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ADGRG4Q8IZF6 3080 aa3.14□□□□□ -1.91
SCAF11-212ENST00000549162 C16orf90A8MZG2 172 aa3.13□□□□□ -1.91
SCAF11-212ENST00000549162 S4R3C0 116 aa3.13□□□□□ -1.91
SCAF11-212ENST00000549162 NBDYA0A0U1RRE5 68 aa3.13□□□□□ -1.91
SCAF11-212ENST00000549162 PAX4O43316 350 aa3.13□□□□□ -1.91
SCAF11-212ENST00000549162 TRACP01848 142 aa3.13□□□□□ -1.91
SCAF11-212ENST00000549162 NOP10Q9NPE3 64 aaKnown RBP3.13□□□□□ -1.91
SCAF11-212ENST00000549162 CELSR2Q9HCU4 2923 aa3.13□□□□□ -1.91
SCAF11-212ENST00000549162 MYCBP2O75592 4640 aa3.13□□□□□ -1.91
SCAF11-212ENST00000549162 CEND1Q8N111 149 aa3.13□□□□□ -1.91
SCAF11-212ENST00000549162 A0A0C4DFX4 3053 aa3.13□□□□□ -1.91
SCAF11-212ENST00000549162 TRBV7-7A0A0K0K1E9 115 aa3.12□□□□□ -1.91
SCAF11-212ENST00000549162 FBN3Q75N90 2809 aa3.12□□□□□ -1.91
SCAF11-212ENST00000549162 LAMA5O15230 3695 aa3.12□□□□□ -1.91
SCAF11-212ENST00000549162 LOC110117498A0A087WWA1 95 aa3.12□□□□□ -1.91
SCAF11-212ENST00000549162 M0R143 59 aa3.12□□□□□ -1.91
SCAF11-212ENST00000549162 APELAP0DMC3 54 aa3.12□□□□□ -1.91
SCAF11-212ENST00000549162 S100A2P29034 98 aa3.12□□□□□ -1.91
SCAF11-212ENST00000549162 NANOS2P60321 138 aaKnown RBP3.12□□□□□ -1.91
SCAF11-212ENST00000549162 MRPL16Q9NX20 251 aaKnown RBP3.12□□□□□ -1.91
SCAF11-212ENST00000549162 PRO0461Q9UI25 63 aa3.12□□□□□ -1.91
SCAF11-212ENST00000549162 FLNCQ14315 2725 aa3.12□□□□□ -1.91
SCAF11-212ENST00000549162 A6NDN8 102 aa3.12□□□□□ -1.91
SCAF11-212ENST00000549162 SS18Q15532 418 aa3.12□□□□□ -1.91
SCAF11-212ENST00000549162 BVES-AS1Q5T3Y7 98 aa3.12□□□□□ -1.91
SCAF11-212ENST00000549162 Q6ZUT4 128 aa3.12□□□□□ -1.91
SCAF11-212ENST00000549162 TRAV12-2A0A075B6T6 113 aa3.11□□□□□ -1.91
SCAF11-212ENST00000549162 IGHV3OR16-13A0A075B7E8 117 aa3.11□□□□□ -1.91
SCAF11-212ENST00000549162 IGHV3-30-3P0DP02 117 aa3.11□□□□□ -1.91
SCAF11-212ENST00000549162 DDTP30046 118 aa3.11□□□□□ -1.91
SCAF11-212ENST00000549162 FAM19A5Q7Z5A7 132 aaPredicted RBP3.11□□□□□ -1.91
SCAF11-212ENST00000549162 Q8N814 137 aa3.11□□□□□ -1.91
SCAF11-212ENST00000549162 COX7B2Q8TF08 81 aa3.11□□□□□ -1.91
SCAF11-212ENST00000549162 PTPN13Q12923 2485 aa3.11□□□□□ -1.91
SCAF11-212ENST00000549162 CNOT1A5YKK6 2376 aaKnown RBP3.11□□□□□ -1.91
SCAF11-212ENST00000549162 USP9YO00507 2555 aaPredicted RBP3.11□□□□□ -1.91
SCAF11-212ENST00000549162 TRBV20-1A0A075B6N2 111 aa3.11□□□□□ -1.91
SCAF11-212ENST00000549162 KRTAP7-1Q8IUC3 87 aa3.11□□□□□ -1.91
SCAF11-212ENST00000549162 S100A4P26447 101 aaKnown RBP3.11□□□□□ -1.91
SCAF11-212ENST00000549162 TSPEAR-AS2P59090 65 aa3.11□□□□□ -1.91
SCAF11-212ENST00000549162 XCL2Q9UBD3 114 aa3.11□□□□□ -1.91
SCAF11-212ENST00000549162 ZANQ9Y493 2812 aa3.11□□□□□ -1.91
SCAF11-212ENST00000549162 DEFB131BA0A096LNP1 70 aa3.1□□□□□ -1.91
SCAF11-212ENST00000549162 NDUFC2-KCTD14E9PQ53 114 aa3.1□□□□□ -1.91
SCAF11-212ENST00000549162 J3QQQ9 107 aa3.1□□□□□ -1.91
SCAF11-212ENST00000549162 SLPIP03973 132 aa3.1□□□□□ -1.91
SCAF11-212ENST00000549162 CASC10Q5T4H9 136 aa3.1□□□□□ -1.91
SCAF11-212ENST00000549162 REG3AQ06141 175 aa3.1□□□□□ -1.91
SCAF11-212ENST00000549162 JPT2Q9H910 190 aa3.1□□□□□ -1.91
SCAF11-212ENST00000549162 PCNX1Q96RV3 2341 aa3.09□□□□□ -1.91
SCAF11-212ENST00000549162 C2CD3Q4AC94 2353 aa3.09□□□□□ -1.91
SCAF11-212ENST00000549162 SLC25A34Q6PIV7 304 aa3.09□□□□□ -1.91
SCAF11-212ENST00000549162 CHAC1Q9BUX1 264 aa3.09□□□□□ -1.91
SCAF11-212ENST00000549162 OCR1Q9BZK8 76 aa3.09□□□□□ -1.91
SCAF11-212ENST00000549162 NF1P21359 2839 aa3.09□□□□□ -1.91
SCAF11-212ENST00000549162 TRGV1A0A0A0MS02 117 aa3.09□□□□□ -1.91
SCAF11-212ENST00000549162 LINC01547P58512 204 aaPredicted RBP3.09□□□□□ -1.91
SCAF11-212ENST00000549162 ELOF1P60002 83 aaKnown RBP3.09□□□□□ -1.91
SCAF11-212ENST00000549162 COX6A2Q02221 97 aa3.09□□□□□ -1.91
SCAF11-212ENST00000549162 C14orf144Q96I85 54 aa3.09□□□□□ -1.91
SCAF11-212ENST00000549162 C22orf24Q9Y442 160 aa3.09□□□□□ -1.91
SCAF11-212ENST00000549162 HELZ2Q9BYK8 2649 aaKnown RBP3.09□□□□□ -1.92
SCAF11-212ENST00000549162 IGLV4-60A0A075B6I1 120 aa3.09□□□□□ -1.92
SCAF11-212ENST00000549162 H0YGX0 51 aa3.09□□□□□ -1.92
SCAF11-212ENST00000549162 H3BMG7 143 aa3.09□□□□□ -1.92
SCAF11-212ENST00000549162 Q6ZTC4 211 aa3.09□□□□□ -1.92
SCAF11-212ENST00000549162 RYR3Q15413 4870 aa3.09□□□□□ -1.92
SCAF11-212ENST00000549162 TRAV13-2A0A0B4J235 113 aa3.08□□□□□ -1.92
SCAF11-212ENST00000549162 LOC107984640A0A0U1RRK4 108 aa3.08□□□□□ -1.92
SCAF11-212ENST00000549162 H3BT86 120 aa3.08□□□□□ -1.92
SCAF11-212ENST00000549162 ZNF56Q15929 161 aa3.08□□□□□ -1.92
SCAF11-212ENST00000549162 WFDC10AQ9H1F0 79 aa3.08□□□□□ -1.92
SCAF11-212ENST00000549162 COX7A2LO14548 114 aa3.08□□□□□ -1.92
SCAF11-212ENST00000549162 FBN1P35555 2871 aaKnown RBP3.08□□□□□ -1.92
SCAF11-212ENST00000549162 MYO9AB2RTY4 2548 aa3.07□□□□□ -1.92
SCAF11-212ENST00000549162 IGLV1-50A0A075B6I6 118 aa3.07□□□□□ -1.92
SCAF11-212ENST00000549162 IGKV2-28A0A075B6P5 120 aa3.07□□□□□ -1.92
SCAF11-212ENST00000549162 TSTD3H0UI37 97 aa3.07□□□□□ -1.92
SCAF11-212ENST00000549162 IGKV2D-28P01615 120 aa3.07□□□□□ -1.92
SCAF11-212ENST00000549162 LINC00308Q8TCZ7 52 aa3.07□□□□□ -1.92
SCAF11-212ENST00000549162 HIST1H4GQ99525 98 aa3.07□□□□□ -1.92
SCAF11-212ENST00000549162 VAMP8Q9BV40 100 aa3.07□□□□□ -1.92
SCAF11-212ENST00000549162 TRGV4A0A0C4DH28 118 aa3.07□□□□□ -1.92
SCAF11-212ENST00000549162 ZNF815PA8K554 130 aa3.07□□□□□ -1.92
SCAF11-212ENST00000549162 PRR3P79522 188 aaKnown RBP3.07□□□□□ -1.92
SCAF11-212ENST00000549162 C12orf57Q99622 126 aa3.07□□□□□ -1.92
SCAF11-212ENST00000549162 TRBV10-3A0A0K0K1G6 114 aa3.07□□□□□ -1.92
SCAF11-212ENST00000549162 M0R378 163 aa3.07□□□□□ -1.92
SCAF11-212ENST00000549162 IGHV3-33P01772 117 aa3.07□□□□□ -1.92
SCAF11-212ENST00000549162 CHCHD5Q9BSY4 110 aa3.07□□□□□ -1.92
SCAF11-212ENST00000549162 IGF2RP11717 2491 aa3.07□□□□□ -1.92
SCAF11-212ENST00000549162 TAX1BP3O14907 124 aa3.06□□□□□ -1.92
SCAF11-212ENST00000549162 DEFB135Q30KP9 77 aa3.06□□□□□ -1.92
SCAF11-212ENST00000549162 SPATA45Q537H7 98 aa3.06□□□□□ -1.92
SCAF11-212ENST00000549162 ADAMTSL4-AS1Q5T5F5 129 aa3.06□□□□□ -1.92
SCAF11-212ENST00000549162 ZFYVE26Q68DK2 2539 aa3.06□□□□□ -1.92
SCAF11-212ENST00000549162 PDE6GP18545 87 aa3.06□□□□□ -1.92
SCAF11-212ENST00000549162 DEFB1P60022 68 aa3.06□□□□□ -1.92
SCAF11-212ENST00000549162 KRTDAPP60985 99 aa3.06□□□□□ -1.92
SCAF11-212ENST00000549162 SPRR4Q96PI1 79 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms