RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 COX17Q14061 63 aa6.83□□□□□ -1.32
SMARCD1-205ENST00000548573 C11orf68Q9H3H3 251 aaKnown RBP6.83□□□□□ -1.32
SMARCD1-205ENST00000548573 DEFB130BP0DP73 79 aa6.83□□□□□ -1.32
SMARCD1-205ENST00000548573 DEFB130AP0DP74 79 aa6.83□□□□□ -1.32
SMARCD1-205ENST00000548573 IGKV3D-7A0A0C4DH55 119 aa6.82□□□□□ -1.32
SMARCD1-205ENST00000548573 NANOS2P60321 138 aaKnown RBP6.82□□□□□ -1.32
SMARCD1-205ENST00000548573 Q8N814 137 aa6.82□□□□□ -1.32
SMARCD1-205ENST00000548573 MYO9AB2RTY4 2548 aa6.82□□□□□ -1.32
SMARCD1-205ENST00000548573 TMEM256-PLSCR3K7ERE1 68 aa6.81□□□□□ -1.32
SMARCD1-205ENST00000548573 S100A7L2Q5SY68 101 aa6.81□□□□□ -1.32
SMARCD1-205ENST00000548573 ZNF843Q8N446 348 aa6.81□□□□□ -1.32
SMARCD1-205ENST00000548573 WFDC11Q8NEX6 87 aa6.81□□□□□ -1.32
SMARCD1-205ENST00000548573 KIAA0087Q14695 138 aa6.81□□□□□ -1.32
SMARCD1-205ENST00000548573 PRO0255Q9UI72 69 aa6.81□□□□□ -1.32
SMARCD1-205ENST00000548573 ACACBO00763 2458 aa6.81□□□□□ -1.32
SMARCD1-205ENST00000548573 MYO18BQ8IUG5 2567 aa6.8□□□□□ -1.32
SMARCD1-205ENST00000548573 IGHV4-28A0A0C4DH34 117 aa6.8□□□□□ -1.32
SMARCD1-205ENST00000548573 CD164L2Q6UWJ8 174 aa6.8□□□□□ -1.32
SMARCD1-205ENST00000548573 USP24Q9UPU5 2620 aa6.8□□□□□ -1.32
SMARCD1-205ENST00000548573 SMIM9A6NGZ8 99 aa6.8□□□□□ -1.32
SMARCD1-205ENST00000548573 SERP2Q8N6R1 65 aa6.8□□□□□ -1.32
SMARCD1-205ENST00000548573 WNK1Q9H4A3 2382 aa6.8□□□□□ -1.32
SMARCD1-205ENST00000548573 ATP5EP2Q5VTU8 51 aa6.79□□□□□ -1.32
SMARCD1-205ENST00000548573 CLPSL2Q6UWE3 100 aa6.79□□□□□ -1.32
SMARCD1-205ENST00000548573 NAV2Q8IVL1 2488 aa6.79□□□□□ -1.32
SMARCD1-205ENST00000548573 NOTCH3Q9UM47 2321 aa6.79□□□□□ -1.32
SMARCD1-205ENST00000548573 X6R8D5 127 aa6.78□□□□□ -1.32
SMARCD1-205ENST00000548573 UBR5O95071 2799 aaPredicted RBP6.78□□□□□ -1.32
SMARCD1-205ENST00000548573 A0A087WVE0 104 aa6.78□□□□□ -1.32
SMARCD1-205ENST00000548573 USP17L23D6RBM5 183 aa6.78□□□□□ -1.32
SMARCD1-205ENST00000548573 PRR3P79522 188 aaKnown RBP6.78□□□□□ -1.32
SMARCD1-205ENST00000548573 ZNF469Q96JG9 3925 aaPredicted RBP6.78□□□□□ -1.32
SMARCD1-205ENST00000548573 PTPN13Q12923 2485 aa6.77□□□□□ -1.33
SMARCD1-205ENST00000548573 hADV29S1A0JD25 119 aa6.77□□□□□ -1.33
SMARCD1-205ENST00000548573 LYPD5Q6UWN5 251 aa6.77□□□□□ -1.33
SMARCD1-205ENST00000548573 LINC00269Q8N2A0 174 aa6.77□□□□□ -1.33
SMARCD1-205ENST00000548573 MUC7Q8TAX7 377 aa6.77□□□□□ -1.33
SMARCD1-205ENST00000548573 C2CD3Q4AC94 2353 aa6.77□□□□□ -1.33
SMARCD1-205ENST00000548573 FAM208BQ5VWN6 2430 aa6.77□□□□□ -1.33
SMARCD1-205ENST00000548573 SETXQ7Z333 2677 aaKnown RBP6.77□□□□□ -1.33
SMARCD1-205ENST00000548573 KRTAP1-1Q07627 177 aa6.77□□□□□ -1.33
SMARCD1-205ENST00000548573 CHCHD10Q8WYQ3 142 aaPredicted RBP6.77□□□□□ -1.33
SMARCD1-205ENST00000548573 NBPF19A0A087WUL8 3843 aa6.76□□□□□ -1.33
SMARCD1-205ENST00000548573 A0A096LPF7 62 aa6.76□□□□□ -1.33
SMARCD1-205ENST00000548573 LYRM9A8MSI8 78 aa6.76□□□□□ -1.33
SMARCD1-205ENST00000548573 J3KT08 172 aa6.76□□□□□ -1.33
SMARCD1-205ENST00000548573 RPS28P62857 69 aaKnown RBP6.76□□□□□ -1.33
SMARCD1-205ENST00000548573 UPK3BQ9BT76 320 aa6.76□□□□□ -1.33
SMARCD1-205ENST00000548573 TRBV10-3A0A0K0K1G6 114 aa6.75□□□□□ -1.33
SMARCD1-205ENST00000548573 REG3AQ06141 175 aa6.75□□□□□ -1.33
SMARCD1-205ENST00000548573 C6orf99Q4VX62 202 aa6.75□□□□□ -1.33
SMARCD1-205ENST00000548573 EPG5Q9HCE0 2579 aa6.75□□□□□ -1.33
SMARCD1-205ENST00000548573 CENPEQ02224 2701 aa6.75□□□□□ -1.33
SMARCD1-205ENST00000548573 TMEM258P61165 79 aa6.75□□□□□ -1.33
SMARCD1-205ENST00000548573 LINC00575Q6W349 94 aa6.75□□□□□ -1.33
SMARCD1-205ENST00000548573 ANGP03950 147 aaKnown RBP6.74□□□□□ -1.33
SMARCD1-205ENST00000548573 HILS1P60008 231 aa6.74□□□□□ -1.33
SMARCD1-205ENST00000548573 ZNF462Q96JM2 2506 aa6.74□□□□□ -1.33
SMARCD1-205ENST00000548573 C9orf116Q5BN46 136 aaPredicted RBP6.73□□□□□ -1.33
SMARCD1-205ENST00000548573 LINC00482Q8N8I6 264 aa6.73□□□□□ -1.33
SMARCD1-205ENST00000548573 UBL5Q9BZL1 73 aa6.73□□□□□ -1.33
SMARCD1-205ENST00000548573 CYSTM1Q9H1C7 97 aa6.73□□□□□ -1.33
SMARCD1-205ENST00000548573 CUBNO60494 3623 aa6.73□□□□□ -1.33
SMARCD1-205ENST00000548573 LRRK2Q5S007 2527 aa6.73□□□□□ -1.33
SMARCD1-205ENST00000548573 TLN2Q9Y4G6 2542 aa6.73□□□□□ -1.33
SMARCD1-205ENST00000548573 IGLV10-54A0A075B6I4 117 aa6.73□□□□□ -1.33
SMARCD1-205ENST00000548573 Q8NDZ9 215 aa6.73□□□□□ -1.33
SMARCD1-205ENST00000548573 ABCA12Q86UK0 2595 aa6.73□□□□□ -1.33
SMARCD1-205ENST00000548573 LOC107984640A0A0U1RRK4 108 aa6.72□□□□□ -1.33
SMARCD1-205ENST00000548573 ZNF561-AS1K7EIQ3 104 aa6.72□□□□□ -1.33
SMARCD1-205ENST00000548573 ITPR3Q14573 2671 aa6.72□□□□□ -1.33
SMARCD1-205ENST00000548573 LOC110117498A0A087WWA1 95 aa6.72□□□□□ -1.33
SMARCD1-205ENST00000548573 A0A0J9YWU9 116 aa6.72□□□□□ -1.33
SMARCD1-205ENST00000548573 IGHV4-30-4P0DP06 118 aa6.72□□□□□ -1.33
SMARCD1-205ENST00000548573 RBM3P98179 157 aaKnown RBP6.72□□□□□ -1.33
SMARCD1-205ENST00000548573 APCP25054 2843 aa6.71□□□□□ -1.34
SMARCD1-205ENST00000548573 H3BQ85 93 aa6.71□□□□□ -1.34
SMARCD1-205ENST00000548573 Q6ZQT0 140 aa6.71□□□□□ -1.34
SMARCD1-205ENST00000548573 C6orf223Q8N319 242 aa6.71□□□□□ -1.34
SMARCD1-205ENST00000548573 Q8N3U1 123 aa6.71□□□□□ -1.34
SMARCD1-205ENST00000548573 JMJD1CQ15652 2540 aa6.71□□□□□ -1.34
SMARCD1-205ENST00000548573 SPAG11BQ08648 103 aa6.7□□□□□ -1.34
SMARCD1-205ENST00000548573 ENHOQ6UWT2 76 aa6.7□□□□□ -1.34
SMARCD1-205ENST00000548573 NF1P21359 2839 aa6.7□□□□□ -1.34
SMARCD1-205ENST00000548573 GHRHP01286 108 aa6.7□□□□□ -1.34
SMARCD1-205ENST00000548573 IGLV6-57P01721 117 aa6.7□□□□□ -1.34
SMARCD1-205ENST00000548573 KRTAP10-3P60369 221 aa6.7□□□□□ -1.34
SMARCD1-205ENST00000548573 SONP18583 2426 aaKnown RBP6.69□□□□□ -1.34
SMARCD1-205ENST00000548573 NIPBLQ6KC79 2804 aaeCLIP6.69□□□□□ -1.34
SMARCD1-205ENST00000548573 C10orf25Q5T742 122 aa6.69□□□□□ -1.34
SMARCD1-205ENST00000548573 UNQ6190/PRO20217Q6UXQ8 127 aa6.69□□□□□ -1.34
SMARCD1-205ENST00000548573 FAM19A1Q7Z5A9 133 aa6.69□□□□□ -1.34
SMARCD1-205ENST00000548573 DPH3Q96FX2 82 aa6.69□□□□□ -1.34
SMARCD1-205ENST00000548573 TRAV23DV6A0A075B6W5 121 aa6.69□□□□□ -1.34
SMARCD1-205ENST00000548573 BCE1O60756 84 aa6.69□□□□□ -1.34
SMARCD1-205ENST00000548573 DAD1P61803 113 aa6.69□□□□□ -1.34
SMARCD1-205ENST00000548573 FAM19A5Q7Z5A7 132 aaPredicted RBP6.69□□□□□ -1.34
SMARCD1-205ENST00000548573 WFDC9Q8NEX5 89 aa6.69□□□□□ -1.34
SMARCD1-205ENST00000548573 ANK3Q12955 4377 aaKnown RBP6.68□□□□□ -1.34
SMARCD1-205ENST00000548573 GVQW2A0A096LPI5 108 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms