RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 IGKV2D-40P01614 121 aaPredicted RBP1.83□□□□□ -2.12
PTCH1-216ENST00000548379 CRPP02741 224 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 SRP19P09132 144 aaKnown RBP1.83□□□□□ -2.12
PTCH1-216ENST00000548379 NBEAP1P0C6P0 100 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 S100A11P31949 105 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 Q0VG73 95 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 TMEM14EPQ6UXP3 125 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 GOLT1AQ6ZVE7 132 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 SMIM15Q7Z3B0 74 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 KRTAP13-1Q8IUC0 172 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 EXOC3-AS1Q8N2X6 119 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 MGST2Q99735 147 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 NMES1Q9C002 83 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 LENEPQ9Y5L5 61 aa1.83□□□□□ -2.12
PTCH1-216ENST00000548379 APOBP04114 4563 aaKnown RBP1.82□□□□□ -2.12
PTCH1-216ENST00000548379 TNCP24821 2201 aa1.82□□□□□ -2.12
PTCH1-216ENST00000548379 UBE2L5PA0A1B0GUS4 154 aa1.82□□□□□ -2.12
PTCH1-216ENST00000548379 C9orf170A2RU37 121 aa1.82□□□□□ -2.12
PTCH1-216ENST00000548379 NAP1L6A6NFF2 107 aa1.82□□□□□ -2.12
PTCH1-216ENST00000548379 TMEM262E9PQX1 116 aa1.82□□□□□ -2.12
PTCH1-216ENST00000548379 C17orf112F2Z3M2 114 aa1.82□□□□□ -2.12
PTCH1-216ENST00000548379 PYYP10082 97 aa1.82□□□□□ -2.12
PTCH1-216ENST00000548379 ZNF22P17026 224 aaPredicted RBP1.82□□□□□ -2.12
PTCH1-216ENST00000548379 FGF7P21781 194 aa1.82□□□□□ -2.12
PTCH1-216ENST00000548379 S100A4P26447 101 aaKnown RBP1.82□□□□□ -2.12
PTCH1-216ENST00000548379 ASIPP42127 132 aa1.82□□□□□ -2.12
PTCH1-216ENST00000548379 PKIAP61925 76 aa1.82□□□□□ -2.12
PTCH1-216ENST00000548379 FAM229BQ4G0N7 80 aa1.82□□□□□ -2.12
PTCH1-216ENST00000548379 MIC13Q5XKP0 118 aa1.82□□□□□ -2.12
PTCH1-216ENST00000548379 Q6AWC8 147 aa1.82□□□□□ -2.12
PTCH1-216ENST00000548379 OR13C6PQ8NH95 151 aa1.82□□□□□ -2.12
PTCH1-216ENST00000548379 Q8TAT8 98 aa1.82□□□□□ -2.12
PTCH1-216ENST00000548379 HYLS1Q96M11 299 aa1.82□□□□□ -2.12
PTCH1-216ENST00000548379 MIXL1Q9H2W2 232 aa1.82□□□□□ -2.12
PTCH1-216ENST00000548379 LYRM2Q9NU23 88 aaPredicted RBP1.82□□□□□ -2.12
PTCH1-216ENST00000548379 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.81□□□□□ -2.12
PTCH1-216ENST00000548379 A8MWV9 139 aa1.81□□□□□ -2.12
PTCH1-216ENST00000548379 GNRH2O43555 120 aa1.81□□□□□ -2.12
PTCH1-216ENST00000548379 CST7O76096 145 aa1.81□□□□□ -2.12
PTCH1-216ENST00000548379 S100A10P60903 97 aa1.81□□□□□ -2.12
PTCH1-216ENST00000548379 UBE2L3P68036 154 aaKnown RBP1.81□□□□□ -2.12
PTCH1-216ENST00000548379 CCL20P78556 96 aa1.81□□□□□ -2.12
PTCH1-216ENST00000548379 WFDC2Q14508 124 aa1.81□□□□□ -2.12
PTCH1-216ENST00000548379 KHDC3LQ587J8 217 aa1.81□□□□□ -2.12
PTCH1-216ENST00000548379 CFAP126Q5VTH2 177 aa1.81□□□□□ -2.12
PTCH1-216ENST00000548379 SMIM20Q8N5G0 67 aa1.81□□□□□ -2.12
PTCH1-216ENST00000548379 BIN3Q9NQY0 253 aa1.81□□□□□ -2.12
PTCH1-216ENST00000548379 IGHV3-64A0A075B6Q5 118 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 TRAV9-1A0A075B6T8 112 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 A0A1B0GV72 72 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 FAM24AA6NFZ4 105 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 F6UZH7 168 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 HMGB3O15347 200 aaKnown RBP1.8□□□□□ -2.12
PTCH1-216ENST00000548379 NDUFB6O95139 128 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 NPYP01303 97 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 ANGP03950 147 aaKnown RBP1.8□□□□□ -2.12
PTCH1-216ENST00000548379 TMBIM6P55061 237 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 KRTAP10-4P60372 401 aaPredicted RBP1.8□□□□□ -2.12
PTCH1-216ENST00000548379 SPCS2Q15005 226 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 MIAQ16674 131 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 DPPA3Q6W0C5 159 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 MIR17HGQ75NE6 70 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 OR2T35Q8NGX2 323 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 SMCR5Q8TEV8 140 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 TOMM6Q96B49 74 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 HIGD2AQ9BW72 106 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 NPCDR1Q9BY65 106 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 XAGE1AQ9HD64 81 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 OTORQ9NRC9 128 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 OR5AC2Q9NZP5 309 aa1.8□□□□□ -2.12
PTCH1-216ENST00000548379 MYCBP2O75592 4640 aa1.79□□□□□ -2.12
PTCH1-216ENST00000548379 CCDC160A6NGH7 325 aa1.79□□□□□ -2.12
PTCH1-216ENST00000548379 GZMBP10144 247 aa1.79□□□□□ -2.12
PTCH1-216ENST00000548379 FAM74A4Q5TZK3 123 aa1.79□□□□□ -2.12
PTCH1-216ENST00000548379 Q6Q795 121 aa1.79□□□□□ -2.12
PTCH1-216ENST00000548379 C2orf91Q6ZV80 131 aa1.79□□□□□ -2.12
PTCH1-216ENST00000548379 C9orf163Q8N9P6 203 aa1.79□□□□□ -2.12
PTCH1-216ENST00000548379 OR5C1Q8NGR4 320 aa1.79□□□□□ -2.12
PTCH1-216ENST00000548379 TTTY13Q9BZ97 58 aa1.79□□□□□ -2.12
PTCH1-216ENST00000548379 IL36BQ9NZH7 164 aa1.79□□□□□ -2.12
PTCH1-216ENST00000548379 TP73-AS1Q9UF72 201 aa1.79□□□□□ -2.12
PTCH1-216ENST00000548379 SS18L2Q9UHA2 77 aa1.79□□□□□ -2.12
PTCH1-216ENST00000548379 CYSLTR1Q9Y271 337 aa1.79□□□□□ -2.12
PTCH1-216ENST00000548379 SRRM2Q9UQ35 2752 aaKnown RBP1.78□□□□□ -2.12
PTCH1-216ENST00000548379 TRBV7-3A0A075B6L6 115 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 TRBV6-8A0A0A6YYG3 113 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 TRBV10-1A0A0K0K1A3 114 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 FABP5P3A8MUU1 101 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 H3BPC8 53 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 LEPROTO15243 131 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 IFNA7P01567 189 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 SMIM17P0DL12 118 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 MT1HL1P0DM35 61 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 TPT1P13693 172 aaKnown RBP1.78□□□□□ -2.12
PTCH1-216ENST00000548379 HIST1H2BOP23527 126 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 HIST1H2BBP33778 126 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 XCL1P47992 114 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 HIST1H2BDP58876 126 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 HIST1H2BCP62807 126 aa1.78□□□□□ -2.12
PTCH1-216ENST00000548379 GNG5P63218 68 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms