RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 C2orf66Q6UXQ4 117 aa4.11□□□□□ -1.75
SCAF11-211ENST00000547950 Q6ZN92 141 aa4.11□□□□□ -1.75
SCAF11-211ENST00000547950 FAM19A5Q7Z5A7 132 aaPredicted RBP4.11□□□□□ -1.75
SCAF11-211ENST00000547950 C2orf88Q9BSF0 95 aa4.11□□□□□ -1.75
SCAF11-211ENST00000547950 CYSLTR1Q9Y271 337 aa4.11□□□□□ -1.75
SCAF11-211ENST00000547950 LAMTOR2Q9Y2Q5 125 aa4.11□□□□□ -1.75
SCAF11-211ENST00000547950 PRSS2P07478 247 aa4.1□□□□□ -1.75
SCAF11-211ENST00000547950 TLX1NBP0CAT3 122 aa4.1□□□□□ -1.75
SCAF11-211ENST00000547950 UBE2D1P51668 147 aa4.1□□□□□ -1.75
SCAF11-211ENST00000547950 ORMDL2Q53FV1 153 aa4.1□□□□□ -1.75
SCAF11-211ENST00000547950 C6orf226Q5I0X4 101 aa4.1□□□□□ -1.75
SCAF11-211ENST00000547950 KRTAP11-1Q8IUC1 163 aa4.1□□□□□ -1.75
SCAF11-211ENST00000547950 PACRGQ96M98 296 aaPredicted RBP4.1□□□□□ -1.75
SCAF11-211ENST00000547950 CTDSP1Q9GZU7 261 aa4.1□□□□□ -1.75
SCAF11-211ENST00000547950 TOMM7Q9P0U1 55 aa4.1□□□□□ -1.75
SCAF11-211ENST00000547950 IGIPA6NJ69 53 aa4.09□□□□□ -1.75
SCAF11-211ENST00000547950 IGLV7-43P04211 117 aa4.09□□□□□ -1.75
SCAF11-211ENST00000547950 CKS1BP61024 79 aa4.09□□□□□ -1.75
SCAF11-211ENST00000547950 KIAA1644Q3SXP7 199 aa4.09□□□□□ -1.75
SCAF11-211ENST00000547950 TRBV30A0A0K0K1B3 111 aa4.08□□□□□ -1.76
SCAF11-211ENST00000547950 NDUFC2-KCTD14E9PQ53 114 aa4.08□□□□□ -1.76
SCAF11-211ENST00000547950 UBE2BP63146 152 aa4.08□□□□□ -1.76
SCAF11-211ENST00000547950 C21orf62-AS1Q17RA5 79 aa4.08□□□□□ -1.76
SCAF11-211ENST00000547950 LINC00173Q6ZV60 143 aa4.08□□□□□ -1.76
SCAF11-211ENST00000547950 KRTAP7-1Q8IUC3 87 aa4.08□□□□□ -1.76
SCAF11-211ENST00000547950 LINC01561Q8N1V8 128 aa4.08□□□□□ -1.76
SCAF11-211ENST00000547950 LINC00469Q8N7U9 141 aa4.08□□□□□ -1.76
SCAF11-211ENST00000547950 PRR26Q8N8Z3 221 aa4.08□□□□□ -1.76
SCAF11-211ENST00000547950 DIRC1Q969H9 104 aa4.08□□□□□ -1.76
SCAF11-211ENST00000547950 AMELXQ99217 191 aa4.08□□□□□ -1.76
SCAF11-211ENST00000547950 ALKBH7Q9BT30 221 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-211ENST00000547950 NXT2Q9NPJ8 142 aaKnown RBP4.08□□□□□ -1.76
SCAF11-211ENST00000547950 K7EMI3 77 aa4.07□□□□□ -1.76
SCAF11-211ENST00000547950 M0QXV9 152 aa4.07□□□□□ -1.76
SCAF11-211ENST00000547950 G0S2P27469 103 aa4.07□□□□□ -1.76
SCAF11-211ENST00000547950 CLLU1Q5K131 121 aa4.07□□□□□ -1.76
SCAF11-211ENST00000547950 PAPPA-AS1Q5QFB9 102 aa4.07□□□□□ -1.76
SCAF11-211ENST00000547950 C9orf129Q5T035 196 aaKnown RBP4.07□□□□□ -1.76
SCAF11-211ENST00000547950 SCGB3A1Q96QR1 104 aa4.07□□□□□ -1.76
SCAF11-211ENST00000547950 GEMIN7Q9H840 131 aaKnown RBP4.07□□□□□ -1.76
SCAF11-211ENST00000547950 CDKN2A-AS1Q9UH64 79 aa4.07□□□□□ -1.76
SCAF11-211ENST00000547950 TMEM218A2RU14 115 aa4.06□□□□□ -1.76
SCAF11-211ENST00000547950 H0Y9J4 135 aa4.06□□□□□ -1.76
SCAF11-211ENST00000547950 NPSP0C0P6 89 aa4.06□□□□□ -1.76
SCAF11-211ENST00000547950 ADCYAP1P18509 176 aa4.06□□□□□ -1.76
SCAF11-211ENST00000547950 HERVK_113P63121 156 aa4.06□□□□□ -1.76
SCAF11-211ENST00000547950 SEC11AP67812 179 aa4.06□□□□□ -1.76
SCAF11-211ENST00000547950 Q8IZM0 81 aa4.06□□□□□ -1.76
SCAF11-211ENST00000547950 TOMM6Q96B49 74 aa4.06□□□□□ -1.76
SCAF11-211ENST00000547950 XAGE1AQ9HD64 81 aa4.06□□□□□ -1.76
SCAF11-211ENST00000547950 S100PP25815 95 aa4.05□□□□□ -1.76
SCAF11-211ENST00000547950 ERASQ7Z444 233 aa4.05□□□□□ -1.76
SCAF11-211ENST00000547950 FAM19A3Q7Z5A8 133 aa4.05□□□□□ -1.76
SCAF11-211ENST00000547950 TIMM17AQ99595 171 aa4.05□□□□□ -1.76
SCAF11-211ENST00000547950 C22orf24Q9Y442 160 aa4.05□□□□□ -1.76
SCAF11-211ENST00000547950 TNXBP22105 4242 aa4.04□□□□□ -1.76
SCAF11-211ENST00000547950 F8VRH5 84 aa4.04□□□□□ -1.76
SCAF11-211ENST00000547950 LBHQ53QV2 105 aaPredicted RBP4.04□□□□□ -1.76
SCAF11-211ENST00000547950 UQCC3Q6UW78 93 aa4.04□□□□□ -1.76
SCAF11-211ENST00000547950 TRAV9-1A0A075B6T8 112 aa4.03□□□□□ -1.76
SCAF11-211ENST00000547950 TINCRA0A1B0GVN0 87 aa4.03□□□□□ -1.76
SCAF11-211ENST00000547950 RAB5BP61020 215 aa4.03□□□□□ -1.76
SCAF11-211ENST00000547950 IFITM2Q01629 132 aa4.03□□□□□ -1.76
SCAF11-211ENST00000547950 FABP9Q0Z7S8 132 aa4.03□□□□□ -1.76
SCAF11-211ENST00000547950 FA2HQ7L5A8 372 aa4.03□□□□□ -1.76
SCAF11-211ENST00000547950 COX7B2Q8TF08 81 aa4.03□□□□□ -1.76
SCAF11-211ENST00000547950 SEC11CQ9BY50 192 aa4.03□□□□□ -1.76
SCAF11-211ENST00000547950 GNB1LQ9BYB4 327 aa4.03□□□□□ -1.76
SCAF11-211ENST00000547950 CST9LQ9H4G1 147 aa4.03□□□□□ -1.76
SCAF11-211ENST00000547950 IGLV1-50A0A075B6I6 118 aa4.02□□□□□ -1.77
SCAF11-211ENST00000547950 GAGE10A6NGK3 116 aa4.02□□□□□ -1.77
SCAF11-211ENST00000547950 RPL37AP8A6NKH3 93 aa4.02□□□□□ -1.77
SCAF11-211ENST00000547950 SMIM1B2RUZ4 78 aa4.02□□□□□ -1.77
SCAF11-211ENST00000547950 ZNF861PO60384 105 aa4.02□□□□□ -1.77
SCAF11-211ENST00000547950 KRTAP1-4P0C5Y4 121 aa4.02□□□□□ -1.77
SCAF11-211ENST00000547950 SPINK8P0C7L1 97 aa4.02□□□□□ -1.77
SCAF11-211ENST00000547950 CXCL5P42830 114 aa4.02□□□□□ -1.77
SCAF11-211ENST00000547950 NDUFA6P56556 154 aa4.02□□□□□ -1.77
SCAF11-211ENST00000547950 PDZD11Q5EBL8 140 aa4.02□□□□□ -1.77
SCAF11-211ENST00000547950 MRPL55Q7Z7F7 128 aaKnown RBP4.02□□□□□ -1.77
SCAF11-211ENST00000547950 COMMD7Q86VX2 200 aa4.02□□□□□ -1.77
SCAF11-211ENST00000547950 RPS10P5Q9NQ39 176 aa4.02□□□□□ -1.77
SCAF11-211ENST00000547950 SMCO4Q9NRQ5 59 aa4.02□□□□□ -1.77
SCAF11-211ENST00000547950 LINC01546A6NGU7 62 aa4.01□□□□□ -1.77
SCAF11-211ENST00000547950 LINC01549A6NIU2 74 aa4.01□□□□□ -1.77
SCAF11-211ENST00000547950 NUPR1O60356 82 aa4.01□□□□□ -1.77
SCAF11-211ENST00000547950 PMVKQ15126 192 aa4.01□□□□□ -1.77
SCAF11-211ENST00000547950 COX19Q49B96 90 aa4.01□□□□□ -1.77
SCAF11-211ENST00000547950 LINC00167Q96N53 147 aa4.01□□□□□ -1.77
SCAF11-211ENST00000547950 LRP2P98164 4655 aa4□□□□□ -1.77
SCAF11-211ENST00000547950 IGLV5-45A0A087WSX0 123 aa4□□□□□ -1.77
SCAF11-211ENST00000547950 H3BRM9 83 aa4□□□□□ -1.77
SCAF11-211ENST00000547950 BCE1O60756 84 aa4□□□□□ -1.77
SCAF11-211ENST00000547950 TSPAN13O95857 204 aa4□□□□□ -1.77
SCAF11-211ENST00000547950 RPL13AP40429 203 aaKnown RBP4□□□□□ -1.77
SCAF11-211ENST00000547950 RPL28P46779 137 aaKnown RBP4□□□□□ -1.77
SCAF11-211ENST00000547950 PRR4Q16378 134 aa4□□□□□ -1.77
SCAF11-211ENST00000547950 TP73-AS1Q9UF72 201 aa4□□□□□ -1.77
SCAF11-211ENST00000547950 RNF213Q63HN8 5207 aa3.99□□□□□ -1.77
SCAF11-211ENST00000547950 ATP5LO75964 103 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms