RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 GAGE2DQ9UEU5 116 aa16.34■□□□□ 0.21
SRSF9-202ENST00000546942 FAM168BA1KXE4 195 aa16.33■□□□□ 0.2
SRSF9-202ENST00000546942 LINC00614P0C842 121 aa16.33■□□□□ 0.2
SRSF9-202ENST00000546942 CBLN2Q8IUK8 224 aa16.33■□□□□ 0.2
SRSF9-202ENST00000546942 LINC01600Q96MT4 127 aa16.32■□□□□ 0.2
SRSF9-202ENST00000546942 PSORS1C2Q9UIG4 136 aa16.32■□□□□ 0.2
SRSF9-202ENST00000546942 SRSF9Q13242 221 aaKnown RBP eCLIP16.31■□□□□ 0.2
SRSF9-202ENST00000546942 TLX1NBP0CAT3 122 aa16.3■□□□□ 0.2
SRSF9-202ENST00000546942 HERVK_113P63121 156 aa16.3■□□□□ 0.2
SRSF9-202ENST00000546942 REG3GQ6UW15 175 aa16.3■□□□□ 0.2
SRSF9-202ENST00000546942 TOMM7Q9P0U1 55 aa16.3■□□□□ 0.2
SRSF9-202ENST00000546942 FAM19A5Q7Z5A7 132 aaPredicted RBP16.29■□□□□ 0.2
SRSF9-202ENST00000546942 PACRGQ96M98 296 aaPredicted RBP16.29■□□□□ 0.2
SRSF9-202ENST00000546942 PRSS2P07478 247 aa16.28■□□□□ 0.2
SRSF9-202ENST00000546942 C1orf137Q5JT78 98 aa16.28■□□□□ 0.2
SRSF9-202ENST00000546942 TRBV30A0A0K0K1B3 111 aa16.27■□□□□ 0.2
SRSF9-202ENST00000546942 URB1-AS1Q96HZ7 61 aa16.27■□□□□ 0.2
SRSF9-202ENST00000546942 GEMIN7Q9H840 131 aaKnown RBP16.26■□□□□ 0.19
SRSF9-202ENST00000546942 HBDP02042 147 aa16.25■□□□□ 0.19
SRSF9-202ENST00000546942 CKS1BP61024 79 aa16.25■□□□□ 0.19
SRSF9-202ENST00000546942 C6orf226Q5I0X4 101 aa16.25■□□□□ 0.19
SRSF9-202ENST00000546942 ODF1Q14990 250 aa16.24■□□□□ 0.19
SRSF9-202ENST00000546942 PMVKQ15126 192 aa16.24■□□□□ 0.19
SRSF9-202ENST00000546942 CST9LQ9H4G1 147 aa16.24■□□□□ 0.19
SRSF9-202ENST00000546942 CDKN2A-AS1Q9UH64 79 aa16.24■□□□□ 0.19
SRSF9-202ENST00000546942 A0A096LNJ9 63 aa16.23■□□□□ 0.19
SRSF9-202ENST00000546942 CHCHD1Q96BP2 118 aaKnown RBP16.23■□□□□ 0.19
SRSF9-202ENST00000546942 TINCRA0A1B0GVN0 87 aa16.22■□□□□ 0.19
SRSF9-202ENST00000546942 NDUFC2-KCTD14E9PQ53 114 aa16.22■□□□□ 0.19
SRSF9-202ENST00000546942 Q8IZM0 81 aa16.2■□□□□ 0.18
SRSF9-202ENST00000546942 UBR4Q5T4S7 5183 aa16.19■□□□□ 0.18
SRSF9-202ENST00000546942 ATP5LO75964 103 aa16.19■□□□□ 0.18
SRSF9-202ENST00000546942 PDZD11Q5EBL8 140 aa16.19■□□□□ 0.18
SRSF9-202ENST00000546942 KRTAP11-1Q8IUC1 163 aa16.19■□□□□ 0.18
SRSF9-202ENST00000546942 KRTAP7-1Q8IUC3 87 aa16.19■□□□□ 0.18
SRSF9-202ENST00000546942 M0QXV9 152 aa16.18■□□□□ 0.18
SRSF9-202ENST00000546942 C9orf129Q5T035 196 aaKnown RBP16.18■□□□□ 0.18
SRSF9-202ENST00000546942 LINC00469Q8N7U9 141 aa16.18■□□□□ 0.18
SRSF9-202ENST00000546942 IGLV5-45A0A087WSX0 123 aa16.17■□□□□ 0.18
SRSF9-202ENST00000546942 TRGC2P03986 189 aa16.17■□□□□ 0.18
SRSF9-202ENST00000546942 KRTAP10-8P60410 259 aa16.17■□□□□ 0.18
SRSF9-202ENST00000546942 COLCA2A8K830 154 aa16.16■□□□□ 0.18
SRSF9-202ENST00000546942 UBE2BP63146 152 aa16.16■□□□□ 0.18
SRSF9-202ENST00000546942 IGLV7-43P04211 117 aa16.15■□□□□ 0.18
SRSF9-202ENST00000546942 PMCHL1Q16048 86 aa16.14■□□□□ 0.17
SRSF9-202ENST00000546942 BAGE3Q86Y29 109 aa16.13■□□□□ 0.17
SRSF9-202ENST00000546942 XAGE1AQ9HD64 81 aa16.12■□□□□ 0.17
SRSF9-202ENST00000546942 F8VRH5 84 aa16.11■□□□□ 0.17
SRSF9-202ENST00000546942 H3BRM9 83 aa16.11■□□□□ 0.17
SRSF9-202ENST00000546942 IGLC3P0DOY3 106 aa16.11■□□□□ 0.17
SRSF9-202ENST00000546942 CXCL5P42830 114 aa16.11■□□□□ 0.17
SRSF9-202ENST00000546942 SMIM1B2RUZ4 78 aa16.1■□□□□ 0.17
SRSF9-202ENST00000546942 HSBP1O75506 76 aa16.1■□□□□ 0.17
SRSF9-202ENST00000546942 NDUFA6P56556 154 aa16.1■□□□□ 0.17
SRSF9-202ENST00000546942 DIRC1Q969H9 104 aa16.09■□□□□ 0.17
SRSF9-202ENST00000546942 SPINK8P0C7L1 97 aa16.08■□□□□ 0.16
SRSF9-202ENST00000546942 COX7B2Q8TF08 81 aa16.08■□□□□ 0.16
SRSF9-202ENST00000546942 IFI27L1Q96BM0 104 aa16.05■□□□□ 0.16
SRSF9-202ENST00000546942 C22orf24Q9Y442 160 aa16.05■□□□□ 0.16
SRSF9-202ENST00000546942 TRAV12-1A0A0B4J245 112 aa16.04■□□□□ 0.16
SRSF9-202ENST00000546942 H0Y9J4 135 aa16.03■□□□□ 0.16
SRSF9-202ENST00000546942 SERF1AO75920 110 aa16.01■□□□□ 0.15
SRSF9-202ENST00000546942 ZNF22P17026 224 aaPredicted RBP16■□□□□ 0.15
SRSF9-202ENST00000546942 PRR26Q8N8Z3 221 aa16■□□□□ 0.15
SRSF9-202ENST00000546942 CHTOPQ9Y3Y2 248 aaKnown RBP16■□□□□ 0.15
SRSF9-202ENST00000546942 IGLV5-39A0A0G2JS06 123 aa15.99■□□□□ 0.15
SRSF9-202ENST00000546942 LBHQ53QV2 105 aaPredicted RBP15.99■□□□□ 0.15
SRSF9-202ENST00000546942 FAM19A2Q8N3H0 131 aa15.99■□□□□ 0.15
SRSF9-202ENST00000546942 SCO1O75880 301 aa15.98■□□□□ 0.15
SRSF9-202ENST00000546942 C11orf86A6NJI1 115 aa15.97■□□□□ 0.15
SRSF9-202ENST00000546942 LINC00310P59036 64 aa15.97■□□□□ 0.15
SRSF9-202ENST00000546942 LEPROTL1O95214 131 aa15.96■□□□□ 0.15
SRSF9-202ENST00000546942 MRPL55Q7Z7F7 128 aaKnown RBP15.95■□□□□ 0.14
SRSF9-202ENST00000546942 TMEM170BQ5T4T1 132 aa15.94■□□□□ 0.14
SRSF9-202ENST00000546942 SFTA2Q6UW10 78 aa15.94■□□□□ 0.14
SRSF9-202ENST00000546942 HSPB8Q9UJY1 196 aa15.94■□□□□ 0.14
SRSF9-202ENST00000546942 LRP2P98164 4655 aa15.93■□□□□ 0.14
SRSF9-202ENST00000546942 NUPR1O60356 82 aa15.91■□□□□ 0.14
SRSF9-202ENST00000546942 TP73-AS1Q9UF72 201 aa15.91■□□□□ 0.14
SRSF9-202ENST00000546942 GAGE10A6NGK3 116 aa15.9■□□□□ 0.14
SRSF9-202ENST00000546942 RPL37AP8A6NKH3 93 aa15.9■□□□□ 0.14
SRSF9-202ENST00000546942 HIST1H2BKO60814 126 aa15.9■□□□□ 0.14
SRSF9-202ENST00000546942 HIST1H2BJP06899 126 aa15.9■□□□□ 0.14
SRSF9-202ENST00000546942 HIST1H2BOP23527 126 aa15.9■□□□□ 0.14
SRSF9-202ENST00000546942 HIST1H2BBP33778 126 aa15.9■□□□□ 0.14
SRSF9-202ENST00000546942 HIST1H2BDP58876 126 aa15.9■□□□□ 0.14
SRSF9-202ENST00000546942 HIST1H2BCP62807 126 aa15.9■□□□□ 0.14
SRSF9-202ENST00000546942 HIST2H2BEQ16778 126 aa15.9■□□□□ 0.14
SRSF9-202ENST00000546942 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.9■□□□□ 0.14
SRSF9-202ENST00000546942 HIST1H2BHQ93079 126 aa15.9■□□□□ 0.14
SRSF9-202ENST00000546942 HIST1H2BNQ99877 126 aa15.9■□□□□ 0.14
SRSF9-202ENST00000546942 HIST1H2BMQ99879 126 aa15.9■□□□□ 0.14
SRSF9-202ENST00000546942 ZNF861PO60384 105 aa15.89■□□□□ 0.13
SRSF9-202ENST00000546942 KRTAP1-4P0C5Y4 121 aa15.89■□□□□ 0.13
SRSF9-202ENST00000546942 PFN2P35080 140 aa15.89■□□□□ 0.13
SRSF9-202ENST00000546942 LINC00167Q96N53 147 aa15.89■□□□□ 0.13
SRSF9-202ENST00000546942 S100A1P23297 94 aa15.87■□□□□ 0.13
SRSF9-202ENST00000546942 IGLV1-50A0A075B6I6 118 aa15.86■□□□□ 0.13
SRSF9-202ENST00000546942 TMEM223A0PJW6 202 aa15.86■□□□□ 0.13
SRSF9-202ENST00000546942 NKAPP1Q8N9T2 125 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms