RNA–Protein interactions for RNA: ENST00000546407.1

CFTR-207, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 1 (best)

Gene CFTR, Length 222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-207ENST00000546407 C5orf56Q8N8D9 126 aa1.16□□□□□ -2.22
CFTR-207ENST00000546407 Q96NJ1 140 aa1.16□□□□□ -2.22
CFTR-207ENST00000546407 ANAPC11Q9NYG5 84 aa1.16□□□□□ -2.22
CFTR-207ENST00000546407 PTPRDP23468 1912 aa1.16□□□□□ -2.22
CFTR-207ENST00000546407 ANAPC1Q9H1A4 1944 aa1.16□□□□□ -2.22
CFTR-207ENST00000546407 PLXNB3Q9ULL4 1909 aa1.16□□□□□ -2.22
CFTR-207ENST00000546407 ZNF831Q5JPB2 1677 aa1.16□□□□□ -2.22
CFTR-207ENST00000546407 PTPRBP23467 1997 aa1.16□□□□□ -2.22
CFTR-207ENST00000546407 ARHGAP21Q5T5U3 1957 aa1.16□□□□□ -2.22
CFTR-207ENST00000546407 LTBP1Q14766 1721 aa1.15□□□□□ -2.22
CFTR-207ENST00000546407 RAI1Q7Z5J4 1906 aaPredicted RBP1.15□□□□□ -2.22
CFTR-207ENST00000546407 TET1Q8NFU7 2136 aa1.15□□□□□ -2.23
CFTR-207ENST00000546407 DNAJC13O75165 2243 aa1.15□□□□□ -2.23
CFTR-207ENST00000546407 ZFHX3Q15911 3703 aa1.15□□□□□ -2.23
CFTR-207ENST00000546407 H3BRN7 92 aa1.15□□□□□ -2.23
CFTR-207ENST00000546407 LY6G6CO95867 125 aa1.15□□□□□ -2.23
CFTR-207ENST00000546407 HRES1P13985 223 aa1.15□□□□□ -2.23
CFTR-207ENST00000546407 ACYP2P14621 99 aa1.15□□□□□ -2.23
CFTR-207ENST00000546407 LORP23490 312 aaPredicted RBP1.15□□□□□ -2.23
CFTR-207ENST00000546407 LINC00315P59091 139 aa1.15□□□□□ -2.23
CFTR-207ENST00000546407 RPL39P62891 51 aaKnown RBP1.15□□□□□ -2.23
CFTR-207ENST00000546407 SPINK9Q5DT21 86 aa1.15□□□□□ -2.23
CFTR-207ENST00000546407 XP32Q5T750 250 aa1.15□□□□□ -2.23
CFTR-207ENST00000546407 KRTAP11-1Q8IUC1 163 aa1.15□□□□□ -2.23
CFTR-207ENST00000546407 Q8N9L7 120 aa1.15□□□□□ -2.23
CFTR-207ENST00000546407 CDKN2A-AS1Q9UH64 79 aa1.15□□□□□ -2.23
CFTR-207ENST00000546407 R4GN34 69 aa1.15□□□□□ -2.23
CFTR-207ENST00000546407 DLEC1Q9Y238 1755 aa1.15□□□□□ -2.23
CFTR-207ENST00000546407 ARHGEF17Q96PE2 2063 aaPredicted RBP1.15□□□□□ -2.23
CFTR-207ENST00000546407 TRPM6Q9BX84 2022 aa1.15□□□□□ -2.23
CFTR-207ENST00000546407 SIP14410 1827 aa1.15□□□□□ -2.23
CFTR-207ENST00000546407 KIAA1549LQ6ZVL6 1849 aa1.15□□□□□ -2.23
CFTR-207ENST00000546407 NRAPQ86VF7 1730 aa1.15□□□□□ -2.23
CFTR-207ENST00000546407 NCOA6Q14686 2063 aaPredicted RBP1.14□□□□□ -2.23
CFTR-207ENST00000546407 PCDH15Q96QU1 1955 aa1.14□□□□□ -2.23
CFTR-207ENST00000546407 TCF20Q9UGU0 1960 aaKnown RBP1.14□□□□□ -2.23
CFTR-207ENST00000546407 MYO16Q9Y6X6 1858 aa1.14□□□□□ -2.23
CFTR-207ENST00000546407 KRTAP4-8A0A0G2JLE6 195 aa1.14□□□□□ -2.23
CFTR-207ENST00000546407 M0R2N4 97 aa1.14□□□□□ -2.23
CFTR-207ENST00000546407 IGLV6-57P01721 117 aa1.14□□□□□ -2.23
CFTR-207ENST00000546407 ANGP03950 147 aaKnown RBP1.14□□□□□ -2.23
CFTR-207ENST00000546407 RPL37AP61513 92 aaKnown RBP1.14□□□□□ -2.23
CFTR-207ENST00000546407 LINC00304Q8N9R0 145 aa1.14□□□□□ -2.23
CFTR-207ENST00000546407 TYMSOSQ8TAI1 123 aa1.14□□□□□ -2.23
CFTR-207ENST00000546407 RPL39LQ96EH5 51 aaKnown RBP1.14□□□□□ -2.23
CFTR-207ENST00000546407 CCL19Q99731 98 aa1.14□□□□□ -2.23
CFTR-207ENST00000546407 TP53AIP1Q9HCN2 124 aa1.14□□□□□ -2.23
CFTR-207ENST00000546407 CCL26Q9Y258 94 aa1.14□□□□□ -2.23
CFTR-207ENST00000546407 PTPRSQ13332 1948 aa1.14□□□□□ -2.23
CFTR-207ENST00000546407 MYOFQ9NZM1 2061 aa1.14□□□□□ -2.23
CFTR-207ENST00000546407 MUC22E2RYF6 1773 aaPredicted RBP1.13□□□□□ -2.23
CFTR-207ENST00000546407 FREM1Q5H8C1 2179 aa1.13□□□□□ -2.23
CFTR-207ENST00000546407 SHANK1Q9Y566 2161 aa1.13□□□□□ -2.23
CFTR-207ENST00000546407 NRXN2Q9P2S2 1712 aa1.13□□□□□ -2.23
CFTR-207ENST00000546407 A0A096LNT2 108 aa1.13□□□□□ -2.23
CFTR-207ENST00000546407 KRTAP29-1A8MX34 341 aaPredicted RBP1.13□□□□□ -2.23
CFTR-207ENST00000546407 LYNX1G3V0Z9 82 aa1.13□□□□□ -2.23
CFTR-207ENST00000546407 LCE3BQ5TA77 95 aa1.13□□□□□ -2.23
CFTR-207ENST00000546407 TMEM167AQ8TBQ9 72 aa1.13□□□□□ -2.23
CFTR-207ENST00000546407 KRTAP4-12Q9BQ66 201 aa1.13□□□□□ -2.23
CFTR-207ENST00000546407 KRTAP9-9Q9BYP9 154 aa1.13□□□□□ -2.23
CFTR-207ENST00000546407 KRTAP9-4Q9BYQ2 154 aa1.13□□□□□ -2.23
CFTR-207ENST00000546407 KIAA1549Q9HCM3 1950 aa1.13□□□□□ -2.23
CFTR-207ENST00000546407 TNCP24821 2201 aa1.13□□□□□ -2.23
CFTR-207ENST00000546407 PLXNA3P51805 1871 aa1.13□□□□□ -2.23
CFTR-207ENST00000546407 UBR3Q6ZT12 1888 aa1.13□□□□□ -2.23
CFTR-207ENST00000546407 SCN3AQ9NY46 2000 aa1.13□□□□□ -2.23
CFTR-207ENST00000546407 ABCA4P78363 2273 aa1.13□□□□□ -2.23
CFTR-207ENST00000546407 LRP4O75096 1905 aa1.13□□□□□ -2.23
CFTR-207ENST00000546407 SDK2Q58EX2 2172 aa1.13□□□□□ -2.23
CFTR-207ENST00000546407 COL11A1P12107 1806 aaPredicted RBP1.12□□□□□ -2.23
CFTR-207ENST00000546407 MPDZO75970 2070 aa1.12□□□□□ -2.23
CFTR-207ENST00000546407 SDK1Q7Z5N4 2213 aa1.12□□□□□ -2.23
CFTR-207ENST00000546407 IGLV5-48A0A075B6I7 105 aa1.12□□□□□ -2.23
CFTR-207ENST00000546407 M0QY20 66 aa1.12□□□□□ -2.23
CFTR-207ENST00000546407 INE1O15225 51 aa1.12□□□□□ -2.23
CFTR-207ENST00000546407 PRB2P02812 416 aaPredicted RBP1.12□□□□□ -2.23
CFTR-207ENST00000546407 DSCR10P59022 87 aa1.12□□□□□ -2.23
CFTR-207ENST00000546407 C10orf55Q5SWW7 151 aa1.12□□□□□ -2.23
CFTR-207ENST00000546407 LCE2CQ5TA81 110 aa1.12□□□□□ -2.23
CFTR-207ENST00000546407 SSBP3-AS1Q7Z2R9 100 aa1.12□□□□□ -2.23
CFTR-207ENST00000546407 KRTAP4-7Q9BYR0 210 aa1.12□□□□□ -2.23
CFTR-207ENST00000546407 KRTAP3-1Q9BYR8 98 aa1.12□□□□□ -2.23
CFTR-207ENST00000546407 LCTP09848 1927 aa1.12□□□□□ -2.23
CFTR-207ENST00000546407 LAMA4Q16363 1823 aa1.12□□□□□ -2.23
CFTR-207ENST00000546407 ESPL1Q14674 2120 aa1.12□□□□□ -2.23
CFTR-207ENST00000546407 CACNA1DQ01668 2161 aa1.11□□□□□ -2.23
CFTR-207ENST00000546407 MALRD1Q5VYJ5 2156 aa1.11□□□□□ -2.23
CFTR-207ENST00000546407 MDC1Q14676 2089 aaKnown RBP1.11□□□□□ -2.23
CFTR-207ENST00000546407 COL4A1P02462 1669 aa1.11□□□□□ -2.23
CFTR-207ENST00000546407 SPTY2D1-AS1A0A0U1RR47 76 aa1.11□□□□□ -2.23
CFTR-207ENST00000546407 I3L2K1 104 aa1.11□□□□□ -2.23
CFTR-207ENST00000546407 PRB1P04280 392 aa1.11□□□□□ -2.23
CFTR-207ENST00000546407 TPRXLQ17RH7 258 aa1.11□□□□□ -2.23
CFTR-207ENST00000546407 COX6B2Q6YFQ2 88 aa1.11□□□□□ -2.23
CFTR-207ENST00000546407 ARFGEF3Q5TH69 2177 aa1.11□□□□□ -2.23
CFTR-207ENST00000546407 TNRC6BQ9UPQ9 1833 aaKnown RBP1.1□□□□□ -2.23
CFTR-207ENST00000546407 DOCK10Q96BY6 2186 aa1.1□□□□□ -2.23
CFTR-207ENST00000546407 PLXNA2O75051 1894 aa1.1□□□□□ -2.23
CFTR-207ENST00000546407 GOLGA4Q13439 2230 aaKnown RBP1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms