RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 NXPH4O95158 308 aa4.62□□□□□ -1.67
CCDC60-205ENST00000546345 IGHV3-23P01764 117 aa4.62□□□□□ -1.67
CCDC60-205ENST00000546345 C10orf55Q5SWW7 151 aa4.62□□□□□ -1.67
CCDC60-205ENST00000546345 ZFP2Q6ZN57 461 aa4.62□□□□□ -1.67
CCDC60-205ENST00000546345 UBE2DNLQ8IWF7 75 aa4.62□□□□□ -1.67
CCDC60-205ENST00000546345 C6orf223Q8N319 242 aa4.62□□□□□ -1.67
CCDC60-205ENST00000546345 ZNRF2Q8NHG8 242 aa4.62□□□□□ -1.67
CCDC60-205ENST00000546345 LINC00526Q96FQ7 95 aa4.62□□□□□ -1.67
CCDC60-205ENST00000546345 IGLV5-37A0A075B6J1 123 aa4.61□□□□□ -1.67
CCDC60-205ENST00000546345 TRAV4A0A0B4J268 109 aa4.61□□□□□ -1.67
CCDC60-205ENST00000546345 KRTAP29-1A8MX34 341 aaPredicted RBP4.61□□□□□ -1.67
CCDC60-205ENST00000546345 USP17L23D6RBM5 183 aa4.61□□□□□ -1.67
CCDC60-205ENST00000546345 SMKR1H3BMG3 65 aa4.61□□□□□ -1.67
CCDC60-205ENST00000546345 H3BVH4 76 aa4.61□□□□□ -1.67
CCDC60-205ENST00000546345 J3QQQ9 107 aa4.61□□□□□ -1.67
CCDC60-205ENST00000546345 M0R3E3 92 aa4.61□□□□□ -1.67
CCDC60-205ENST00000546345 ATOX1O00244 68 aa4.61□□□□□ -1.67
CCDC60-205ENST00000546345 ZNF415Q09FC8 603 aa4.61□□□□□ -1.67
CCDC60-205ENST00000546345 ZNF876PQ49A33 203 aa4.61□□□□□ -1.67
CCDC60-205ENST00000546345 SDIM1Q6ZPB5 146 aa4.61□□□□□ -1.67
CCDC60-205ENST00000546345 C3orf22Q8N5N4 141 aa4.61□□□□□ -1.67
CCDC60-205ENST00000546345 TMEM263Q8WUH6 116 aaKnown RBP4.61□□□□□ -1.67
CCDC60-205ENST00000546345 TMSB15BA0A087X1C1 80 aa4.6□□□□□ -1.67
CCDC60-205ENST00000546345 IGKV3D-20A0A0C4DH25 116 aa4.6□□□□□ -1.67
CCDC60-205ENST00000546345 NBDYA0A0U1RRE5 68 aa4.6□□□□□ -1.67
CCDC60-205ENST00000546345 IGIPA6NJ69 53 aa4.6□□□□□ -1.67
CCDC60-205ENST00000546345 CRYGAP11844 174 aa4.6□□□□□ -1.67
CCDC60-205ENST00000546345 FUSP35637 526 aaKnown RBP eCLIP4.6□□□□□ -1.67
CCDC60-205ENST00000546345 ZNF80P51504 273 aaPredicted RBP4.6□□□□□ -1.67
CCDC60-205ENST00000546345 FAM222AQ5U5X8 452 aa4.6□□□□□ -1.67
CCDC60-205ENST00000546345 FAM159AQ6UWV7 190 aa4.6□□□□□ -1.67
CCDC60-205ENST00000546345 C2orf82Q6UX34 121 aa4.6□□□□□ -1.67
CCDC60-205ENST00000546345 CLEC19AQ6UXS0 136 aa4.6□□□□□ -1.67
CCDC60-205ENST00000546345 DAND5Q8N907 189 aa4.6□□□□□ -1.67
CCDC60-205ENST00000546345 C17orf77Q96MU5 243 aa4.6□□□□□ -1.67
CCDC60-205ENST00000546345 ODF3Q96PU9 254 aa4.6□□□□□ -1.67
CCDC60-205ENST00000546345 KRTAP1-5Q9BYS1 174 aa4.6□□□□□ -1.67
CCDC60-205ENST00000546345 TTTY13Q9BZ97 58 aa4.6□□□□□ -1.67
CCDC60-205ENST00000546345 IGKV2-40A0A087WW87 121 aaPredicted RBP4.59□□□□□ -1.67
CCDC60-205ENST00000546345 TRBV7-1A0A0A6YYK4 115 aa4.59□□□□□ -1.67
CCDC60-205ENST00000546345 IGHV3-35A0A0C4DH35 117 aa4.59□□□□□ -1.67
CCDC60-205ENST00000546345 TRBV27A0A0K0K1C4 114 aa4.59□□□□□ -1.67
CCDC60-205ENST00000546345 NDUFC2-KCTD14E9PQ53 114 aa4.59□□□□□ -1.67
CCDC60-205ENST00000546345 H3BTX0 84 aa4.59□□□□□ -1.67
CCDC60-205ENST00000546345 CCDC179H3BU77 68 aa4.59□□□□□ -1.67
CCDC60-205ENST00000546345 BUB3O43684 328 aa4.59□□□□□ -1.67
CCDC60-205ENST00000546345 IGKV2D-40P01614 121 aaPredicted RBP4.59□□□□□ -1.67
CCDC60-205ENST00000546345 MIFP14174 115 aa4.59□□□□□ -1.67
CCDC60-205ENST00000546345 POLR2KP53803 58 aaKnown RBP4.59□□□□□ -1.67
CCDC60-205ENST00000546345 TMEM258P61165 79 aa4.59□□□□□ -1.67
CCDC60-205ENST00000546345 PYGO1Q9Y3Y4 419 aa4.59□□□□□ -1.67
CCDC60-205ENST00000546345 IGLV4-69A0A075B6H9 119 aa4.58□□□□□ -1.68
CCDC60-205ENST00000546345 A4D1N5 150 aa4.58□□□□□ -1.68
CCDC60-205ENST00000546345 LST1O00453 97 aa4.58□□□□□ -1.68
CCDC60-205ENST00000546345 IGHV3-48P01763 117 aa4.58□□□□□ -1.68
CCDC60-205ENST00000546345 SMR3BP02814 79 aaPredicted RBP4.58□□□□□ -1.68
CCDC60-205ENST00000546345 COX7CP15954 63 aa4.58□□□□□ -1.68
CCDC60-205ENST00000546345 ZNF22P17026 224 aaPredicted RBP4.58□□□□□ -1.68
CCDC60-205ENST00000546345 FXYD7P58549 80 aa4.58□□□□□ -1.68
CCDC60-205ENST00000546345 HAMPP81172 84 aa4.58□□□□□ -1.68
CCDC60-205ENST00000546345 C9orf153Q5TBE3 101 aa4.58□□□□□ -1.68
CCDC60-205ENST00000546345 METTL26Q96S19 204 aa4.58□□□□□ -1.68
CCDC60-205ENST00000546345 PHLDA3Q9Y5J5 127 aa4.58□□□□□ -1.68
CCDC60-205ENST00000546345 DNAH8Q96JB1 4490 aa4.58□□□□□ -1.68
CCDC60-205ENST00000546345 TMEM223A0PJW6 202 aa4.57□□□□□ -1.68
CCDC60-205ENST00000546345 BCE1O60756 84 aa4.57□□□□□ -1.68
CCDC60-205ENST00000546345 TRACP01848 142 aa4.57□□□□□ -1.68
CCDC60-205ENST00000546345 CRYGDP07320 174 aa4.57□□□□□ -1.68
CCDC60-205ENST00000546345 CTSGP08311 255 aa4.57□□□□□ -1.68
CCDC60-205ENST00000546345 S100A4P26447 101 aaKnown RBP4.57□□□□□ -1.68
CCDC60-205ENST00000546345 KRTAP10-1P60331 282 aa4.57□□□□□ -1.68
CCDC60-205ENST00000546345 CIRBPQ14011 172 aaKnown RBP4.57□□□□□ -1.68
CCDC60-205ENST00000546345 Q1RN00 199 aa4.57□□□□□ -1.68
CCDC60-205ENST00000546345 C5orf38Q86SI9 138 aa4.57□□□□□ -1.68
CCDC60-205ENST00000546345 CSNK1G2-AS1Q8NCQ2 148 aa4.57□□□□□ -1.68
CCDC60-205ENST00000546345 AMELXQ99217 191 aa4.57□□□□□ -1.68
CCDC60-205ENST00000546345 LINC01587Q99440 93 aa4.57□□□□□ -1.68
CCDC60-205ENST00000546345 AGPAT4-IT1Q9H0P7 198 aa4.57□□□□□ -1.68
CCDC60-205ENST00000546345 ICOSQ9Y6W8 199 aa4.57□□□□□ -1.68
CCDC60-205ENST00000546345 TNXBP22105 4242 aa4.56□□□□□ -1.68
CCDC60-205ENST00000546345 IGHV3OR16-8A0A075B7F1 116 aa4.56□□□□□ -1.68
CCDC60-205ENST00000546345 TRAV26-2A0A0B4J265 109 aa4.56□□□□□ -1.68
CCDC60-205ENST00000546345 SMIM9A6NGZ8 99 aa4.56□□□□□ -1.68
CCDC60-205ENST00000546345 H7C423 109 aa4.56□□□□□ -1.68
CCDC60-205ENST00000546345 RNASE4P34096 147 aaKnown RBP4.56□□□□□ -1.68
CCDC60-205ENST00000546345 S100A7L2Q5SY68 101 aa4.56□□□□□ -1.68
CCDC60-205ENST00000546345 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.56□□□□□ -1.68
CCDC60-205ENST00000546345 TRPT1Q86TN4 253 aaKnown RBP4.56□□□□□ -1.68
CCDC60-205ENST00000546345 RNF182Q8N6D2 247 aa4.56□□□□□ -1.68
CCDC60-205ENST00000546345 DAZ1Q9NQZ3 744 aaKnown RBP4.56□□□□□ -1.68
CCDC60-205ENST00000546345 CSDC2Q9Y534 153 aaKnown RBP4.56□□□□□ -1.68
CCDC60-205ENST00000546345 GATA1P15976 413 aaPredicted RBP4.55□□□□□ -1.68
CCDC60-205ENST00000546345 HIST1H4AP62805 103 aaKnown RBP4.55□□□□□ -1.68
CCDC60-205ENST00000546345 MIAQ16674 131 aa4.55□□□□□ -1.68
CCDC60-205ENST00000546345 Q8TAT8 98 aa4.55□□□□□ -1.68
CCDC60-205ENST00000546345 EEF1AKMT3Q96AZ1 226 aa4.55□□□□□ -1.68
CCDC60-205ENST00000546345 TEX49A0A1B0GTD5 131 aa4.54□□□□□ -1.68
CCDC60-205ENST00000546345 MRPS36P82909 103 aaKnown RBP4.54□□□□□ -1.68
CCDC60-205ENST00000546345 RPL36AP83881 106 aaKnown RBP4.54□□□□□ -1.68
CCDC60-205ENST00000546345 ZNF56Q15929 161 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms