RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 MUSTN1Q8IVN3 82 aa6.3□□□□□ -1.4
CLIP1-218ENST00000545889 LINC00474Q9P2X8 69 aa6.3□□□□□ -1.4
CLIP1-218ENST00000545889 IGLV5-52A0A0A0MRZ9 124 aa6.3□□□□□ -1.4
CLIP1-218ENST00000545889 IGLV1-51P01701 117 aa6.3□□□□□ -1.4
CLIP1-218ENST00000545889 IGLV1-40P01703 118 aa6.3□□□□□ -1.4
CLIP1-218ENST00000545889 SPINK6Q6UWN8 80 aa6.3□□□□□ -1.4
CLIP1-218ENST00000545889 ZFAND3Q9H8U3 227 aa6.3□□□□□ -1.4
CLIP1-218ENST00000545889 SMG1Q96Q15 3661 aaKnown RBP6.3□□□□□ -1.4
CLIP1-218ENST00000545889 EDN2P20800 178 aa6.29□□□□□ -1.4
CLIP1-218ENST00000545889 LINC00526Q96FQ7 95 aa6.29□□□□□ -1.4
CLIP1-218ENST00000545889 ZANQ9Y493 2812 aa6.29□□□□□ -1.4
CLIP1-218ENST00000545889 FAM236DA0A1B0GTK5 79 aa6.29□□□□□ -1.4
CLIP1-218ENST00000545889 FAM236CP0DP71 79 aa6.29□□□□□ -1.4
CLIP1-218ENST00000545889 A0A096LNT2 108 aa6.29□□□□□ -1.4
CLIP1-218ENST00000545889 UBE2D2P62837 147 aa6.29□□□□□ -1.4
CLIP1-218ENST00000545889 C1orf195Q5TG92 126 aa6.29□□□□□ -1.4
CLIP1-218ENST00000545889 RBM3P98179 157 aaKnown RBP6.29□□□□□ -1.4
CLIP1-218ENST00000545889 Q6ZTC4 211 aa6.29□□□□□ -1.4
CLIP1-218ENST00000545889 C20orf173Q96LM9 149 aa6.28□□□□□ -1.4
CLIP1-218ENST00000545889 DCHS2Q6V1P9 2916 aa6.28□□□□□ -1.4
CLIP1-218ENST00000545889 SDIM1Q6ZPB5 146 aa6.28□□□□□ -1.4
CLIP1-218ENST00000545889 CELSR2Q9HCU4 2923 aa6.28□□□□□ -1.4
CLIP1-218ENST00000545889 ZNF706Q9Y5V0 76 aaPredicted RBP6.28□□□□□ -1.4
CLIP1-218ENST00000545889 ZNF80P51504 273 aaPredicted RBP6.28□□□□□ -1.4
CLIP1-218ENST00000545889 LINC00643Q86TS7 51 aa6.28□□□□□ -1.4
CLIP1-218ENST00000545889 H7C423 109 aa6.27□□□□□ -1.41
CLIP1-218ENST00000545889 ODF3L2Q3SX64 289 aa6.27□□□□□ -1.41
CLIP1-218ENST00000545889 C16orf95Q9H693 158 aa6.27□□□□□ -1.41
CLIP1-218ENST00000545889 IGLV4-69A0A075B6H9 119 aa6.27□□□□□ -1.41
CLIP1-218ENST00000545889 NEXN-AS1Q8NBZ9 246 aa6.27□□□□□ -1.41
CLIP1-218ENST00000545889 LINC00467Q9BRT7 94 aa6.27□□□□□ -1.41
CLIP1-218ENST00000545889 APCP25054 2843 aa6.27□□□□□ -1.41
CLIP1-218ENST00000545889 KRTAP1-3Q8IUG1 177 aa6.27□□□□□ -1.41
CLIP1-218ENST00000545889 SPANXDQ9BXN6 97 aa6.27□□□□□ -1.41
CLIP1-218ENST00000545889 C14orf132Q9NPU4 83 aa6.27□□□□□ -1.41
CLIP1-218ENST00000545889 C11orf86A6NJI1 115 aa6.27□□□□□ -1.41
CLIP1-218ENST00000545889 IGKV4-1P06312 121 aa6.27□□□□□ -1.41
CLIP1-218ENST00000545889 ACYP1P07311 99 aa6.27□□□□□ -1.41
CLIP1-218ENST00000545889 TMEM258P61165 79 aa6.27□□□□□ -1.41
CLIP1-218ENST00000545889 BAALCQ8WXS3 180 aa6.27□□□□□ -1.41
CLIP1-218ENST00000545889 HRNRQ86YZ3 2850 aaPredicted RBP6.26□□□□□ -1.41
CLIP1-218ENST00000545889 A0A0B4J2C4 111 aa6.26□□□□□ -1.41
CLIP1-218ENST00000545889 CASC2Q6XLA1 102 aa6.26□□□□□ -1.41
CLIP1-218ENST00000545889 TOMM6Q96B49 74 aa6.26□□□□□ -1.41
CLIP1-218ENST00000545889 IGKV2-28A0A075B6P5 120 aa6.25□□□□□ -1.41
CLIP1-218ENST00000545889 H3BT86 120 aa6.25□□□□□ -1.41
CLIP1-218ENST00000545889 TRIAP1O43715 76 aa6.25□□□□□ -1.41
CLIP1-218ENST00000545889 IGKV2D-28P01615 120 aa6.25□□□□□ -1.41
CLIP1-218ENST00000545889 CRIP1P50238 77 aa6.25□□□□□ -1.41
CLIP1-218ENST00000545889 PROK1P58294 105 aa6.25□□□□□ -1.41
CLIP1-218ENST00000545889 CDKN2A-AS1Q9UH64 79 aa6.25□□□□□ -1.41
CLIP1-218ENST00000545889 PRO0628Q9UI54 55 aa6.25□□□□□ -1.41
CLIP1-218ENST00000545889 CD164L2Q6UWJ8 174 aa6.25□□□□□ -1.41
CLIP1-218ENST00000545889 C20orf197Q8N268 126 aa6.25□□□□□ -1.41
CLIP1-218ENST00000545889 KRTAP24-1Q3LI83 254 aa6.24□□□□□ -1.41
CLIP1-218ENST00000545889 COL6A5A8TX70 2615 aa6.24□□□□□ -1.41
CLIP1-218ENST00000545889 LOC100131303A0A0U1RQF7 123 aa6.24□□□□□ -1.41
CLIP1-218ENST00000545889 JMJD7-PLA2G4BH0Y9G9 81 aa6.24□□□□□ -1.41
CLIP1-218ENST00000545889 PRM2P04554 102 aa6.24□□□□□ -1.41
CLIP1-218ENST00000545889 MPLKIPQ8TAP9 179 aa6.23□□□□□ -1.41
CLIP1-218ENST00000545889 IMUPQ9GZP8 106 aa6.23□□□□□ -1.41
CLIP1-218ENST00000545889 PLAC8L1A1L4L8 177 aa6.23□□□□□ -1.41
CLIP1-218ENST00000545889 NDUFC2O95298 119 aa6.23□□□□□ -1.41
CLIP1-218ENST00000545889 PYGO1Q9Y3Y4 419 aa6.23□□□□□ -1.41
CLIP1-218ENST00000545889 ASH1LQ9NR48 2969 aaKnown RBP6.22□□□□□ -1.41
CLIP1-218ENST00000545889 WIPF1O43516 503 aa6.22□□□□□ -1.41
CLIP1-218ENST00000545889 RPL28P46779 137 aaKnown RBP6.22□□□□□ -1.41
CLIP1-218ENST00000545889 UBR5O95071 2799 aaPredicted RBP6.22□□□□□ -1.41
CLIP1-218ENST00000545889 TMEM256-PLSCR3K7ERE1 68 aa6.22□□□□□ -1.41
CLIP1-218ENST00000545889 IGLV2-11P01706 119 aa6.22□□□□□ -1.41
CLIP1-218ENST00000545889 PDE6GP18545 87 aa6.21□□□□□ -1.41
CLIP1-218ENST00000545889 DCANP1Q8TF63 244 aa6.21□□□□□ -1.41
CLIP1-218ENST00000545889 M0QY20 66 aa6.21□□□□□ -1.42
CLIP1-218ENST00000545889 TRAV23DV6A0A075B6W5 121 aa6.21□□□□□ -1.42
CLIP1-218ENST00000545889 IGLV9-49A0A0B4J1Y8 123 aa6.21□□□□□ -1.42
CLIP1-218ENST00000545889 IBA57-AS1B1ANH7 110 aa6.21□□□□□ -1.42
CLIP1-218ENST00000545889 F8WDY8 70 aa6.21□□□□□ -1.42
CLIP1-218ENST00000545889 SERP2Q8N6R1 65 aa6.21□□□□□ -1.42
CLIP1-218ENST00000545889 CHCHD7Q9BUK0 85 aa6.21□□□□□ -1.42
CLIP1-218ENST00000545889 A0A087WVE0 104 aa6.21□□□□□ -1.42
CLIP1-218ENST00000545889 RPS28P62857 69 aaKnown RBP6.21□□□□□ -1.42
CLIP1-218ENST00000545889 RNF185Q96GF1 192 aa6.21□□□□□ -1.42
CLIP1-218ENST00000545889 NOTCH1P46531 2555 aa6.2□□□□□ -1.42
CLIP1-218ENST00000545889 CR1P17927 2039 aa6.2□□□□□ -1.42
CLIP1-218ENST00000545889 RPL37AP8A6NKH3 93 aa6.19□□□□□ -1.42
CLIP1-218ENST00000545889 BPY2O14599 106 aa6.19□□□□□ -1.42
CLIP1-218ENST00000545889 WWC2-AS2Q96NR7 200 aa6.19□□□□□ -1.42
CLIP1-218ENST00000545889 TRBV7-7A0A0K0K1E9 115 aa6.19□□□□□ -1.42
CLIP1-218ENST00000545889 LINC00336Q6ZUF6 198 aa6.19□□□□□ -1.42
CLIP1-218ENST00000545889 LINC00959A0A1B0GUT2 108 aa6.19□□□□□ -1.42
CLIP1-218ENST00000545889 KRTAP1-1Q07627 177 aa6.19□□□□□ -1.42
CLIP1-218ENST00000545889 UPK3BQ9BT76 320 aa6.19□□□□□ -1.42
CLIP1-218ENST00000545889 HIVEP1P15822 2718 aa6.18□□□□□ -1.42
CLIP1-218ENST00000545889 USP17L23D6RBM5 183 aa6.18□□□□□ -1.42
CLIP1-218ENST00000545889 WFDC9Q8NEX5 89 aa6.18□□□□□ -1.42
CLIP1-218ENST00000545889 IGLV4-3A0A075B6K6 122 aa6.18□□□□□ -1.42
CLIP1-218ENST00000545889 KLLNB2CW77 178 aa6.18□□□□□ -1.42
CLIP1-218ENST00000545889 C1orf158Q8N1D5 194 aa6.18□□□□□ -1.42
CLIP1-218ENST00000545889 MUC7Q8TAX7 377 aa6.18□□□□□ -1.42
CLIP1-218ENST00000545889 M0R378 163 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms