RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 MALP21145 153 aa10.98□□□□□ -0.65
LDLR-204ENST00000545707 HELZ2Q9BYK8 2649 aaKnown RBP10.97□□□□□ -0.65
LDLR-204ENST00000545707 FAM222AQ5U5X8 452 aa10.97□□□□□ -0.65
LDLR-204ENST00000545707 GAGE2AQ6NT46 116 aa10.97□□□□□ -0.65
LDLR-204ENST00000545707 UNC79Q9P2D8 2635 aa10.97□□□□□ -0.65
LDLR-204ENST00000545707 IBA57-AS1B1ANH7 110 aa10.97□□□□□ -0.65
LDLR-204ENST00000545707 DEFB4AO15263 64 aa10.97□□□□□ -0.65
LDLR-204ENST00000545707 FASNP49327 2511 aaKnown RBP10.96□□□□□ -0.65
LDLR-204ENST00000545707 SPATA3Q8NHX4 192 aa10.96□□□□□ -0.65
LDLR-204ENST00000545707 TRBV7-7A0A0K0K1E9 115 aa10.96□□□□□ -0.66
LDLR-204ENST00000545707 SLPIP03973 132 aa10.96□□□□□ -0.66
LDLR-204ENST00000545707 ACYP1P07311 99 aa10.95□□□□□ -0.66
LDLR-204ENST00000545707 Q8N3U1 123 aa10.95□□□□□ -0.66
LDLR-204ENST00000545707 DNAL4O96015 105 aa10.95□□□□□ -0.66
LDLR-204ENST00000545707 PRR3P79522 188 aaKnown RBP10.95□□□□□ -0.66
LDLR-204ENST00000545707 LINC00482Q8N8I6 264 aa10.95□□□□□ -0.66
LDLR-204ENST00000545707 PPDPFQ9H3Y8 114 aa10.95□□□□□ -0.66
LDLR-204ENST00000545707 NOTCH2Q04721 2471 aa10.94□□□□□ -0.66
LDLR-204ENST00000545707 FAM236AA0A1B0GUQ0 79 aa10.94□□□□□ -0.66
LDLR-204ENST00000545707 FAM236BA0A1B0GV22 79 aa10.94□□□□□ -0.66
LDLR-204ENST00000545707 LECT2O14960 151 aa10.94□□□□□ -0.66
LDLR-204ENST00000545707 C3orf56Q8N813 242 aa10.94□□□□□ -0.66
LDLR-204ENST00000545707 X6R8D5 127 aa10.94□□□□□ -0.66
LDLR-204ENST00000545707 TENM1Q9UKZ4 2725 aa10.93□□□□□ -0.66
LDLR-204ENST00000545707 HILS1P60008 231 aa10.93□□□□□ -0.66
LDLR-204ENST00000545707 KIR2DL5BQ8NHK3 375 aa10.93□□□□□ -0.66
LDLR-204ENST00000545707 C14orf132Q9NPU4 83 aa10.93□□□□□ -0.66
LDLR-204ENST00000545707 IGLV10-54A0A075B6I4 117 aa10.92□□□□□ -0.66
LDLR-204ENST00000545707 SS18Q15532 418 aa10.92□□□□□ -0.66
LDLR-204ENST00000545707 LINC00643Q86TS7 51 aa10.92□□□□□ -0.66
LDLR-204ENST00000545707 LINC00269Q8N2A0 174 aa10.9□□□□□ -0.66
LDLR-204ENST00000545707 LINC00612Q8N6U2 182 aa10.9□□□□□ -0.66
LDLR-204ENST00000545707 NCR3O14931 201 aa10.89□□□□□ -0.67
LDLR-204ENST00000545707 INAFM2P0DMQ5 153 aa10.89□□□□□ -0.67
LDLR-204ENST00000545707 PRO0255Q9UI72 69 aa10.89□□□□□ -0.67
LDLR-204ENST00000545707 C9orf116Q5BN46 136 aaPredicted RBP10.89□□□□□ -0.67
LDLR-204ENST00000545707 H0YGX0 51 aa10.88□□□□□ -0.67
LDLR-204ENST00000545707 A0A1B0GUV1 79 aa10.88□□□□□ -0.67
LDLR-204ENST00000545707 SDIM1Q6ZPB5 146 aa10.88□□□□□ -0.67
LDLR-204ENST00000545707 DEFB135Q30KP9 77 aa10.87□□□□□ -0.67
LDLR-204ENST00000545707 HECTD1Q9ULT8 2610 aa10.87□□□□□ -0.67
LDLR-204ENST00000545707 Q8IZM0 81 aa10.87□□□□□ -0.67
LDLR-204ENST00000545707 TRRAPQ9Y4A5 3859 aa10.86□□□□□ -0.67
LDLR-204ENST00000545707 IMUPQ9GZP8 106 aa10.85□□□□□ -0.67
LDLR-204ENST00000545707 OTOGQ6ZRI0 2925 aa10.85□□□□□ -0.67
LDLR-204ENST00000545707 ANGP03950 147 aaKnown RBP10.85□□□□□ -0.67
LDLR-204ENST00000545707 NANOS2P60321 138 aaKnown RBP10.84□□□□□ -0.67
LDLR-204ENST00000545707 KIAA0087Q14695 138 aa10.84□□□□□ -0.67
LDLR-204ENST00000545707 CHCHD10Q8WYQ3 142 aaPredicted RBP10.84□□□□□ -0.67
LDLR-204ENST00000545707 LY6G6DO95868 133 aa10.83□□□□□ -0.68
LDLR-204ENST00000545707 LINC00526Q96FQ7 95 aa10.83□□□□□ -0.68
LDLR-204ENST00000545707 LINC00846Q9NV44 126 aa10.83□□□□□ -0.68
LDLR-204ENST00000545707 IGKV3D-7A0A0C4DH55 119 aa10.83□□□□□ -0.68
LDLR-204ENST00000545707 Q8NDZ9 215 aa10.83□□□□□ -0.68
LDLR-204ENST00000545707 REG3AQ06141 175 aa10.82□□□□□ -0.68
LDLR-204ENST00000545707 KLK5Q9Y337 293 aaPredicted RBP10.82□□□□□ -0.68
LDLR-204ENST00000545707 CFAP161Q6P656 301 aa10.81□□□□□ -0.68
LDLR-204ENST00000545707 CD164L2Q6UWJ8 174 aa10.81□□□□□ -0.68
LDLR-204ENST00000545707 OBSCN-AS1Q96MR7 158 aa10.81□□□□□ -0.68
LDLR-204ENST00000545707 CELA1Q9UNI1 258 aa10.81□□□□□ -0.68
LDLR-204ENST00000545707 ATRQ13535 2644 aa10.8□□□□□ -0.68
LDLR-204ENST00000545707 HTN3P15516 51 aa10.8□□□□□ -0.68
LDLR-204ENST00000545707 C6orf223Q8N319 242 aa10.8□□□□□ -0.68
LDLR-204ENST00000545707 IGHV4-28A0A0C4DH34 117 aa10.8□□□□□ -0.68
LDLR-204ENST00000545707 ORMDL1Q9P0S3 153 aa10.8□□□□□ -0.68
LDLR-204ENST00000545707 SMIM9A6NGZ8 99 aa10.79□□□□□ -0.68
LDLR-204ENST00000545707 C10orf25Q5T742 122 aa10.79□□□□□ -0.68
LDLR-204ENST00000545707 DAD1P61803 113 aa10.78□□□□□ -0.68
LDLR-204ENST00000545707 LYRM9A8MSI8 78 aa10.78□□□□□ -0.68
LDLR-204ENST00000545707 CXCL5P42830 114 aa10.78□□□□□ -0.68
LDLR-204ENST00000545707 HIVEP1P15822 2718 aa10.77□□□□□ -0.69
LDLR-204ENST00000545707 Q8N814 137 aa10.77□□□□□ -0.69
LDLR-204ENST00000545707 A0A087WVE0 104 aa10.76□□□□□ -0.69
LDLR-204ENST00000545707 UNQ6190/PRO20217Q6UXQ8 127 aa10.76□□□□□ -0.69
LDLR-204ENST00000545707 LINC01561Q8N1V8 128 aa10.76□□□□□ -0.69
LDLR-204ENST00000545707 SMIM20Q8N5G0 67 aa10.76□□□□□ -0.69
LDLR-204ENST00000545707 KMT2BQ9UMN6 2715 aaPredicted RBP10.76□□□□□ -0.69
LDLR-204ENST00000545707 C6orf99Q4VX62 202 aa10.75□□□□□ -0.69
LDLR-204ENST00000545707 TMEM126AQ9H061 195 aa10.74□□□□□ -0.69
LDLR-204ENST00000545707 C9orf66Q5T8R8 295 aa10.74□□□□□ -0.69
LDLR-204ENST00000545707 C9orf153Q5TBE3 101 aa10.74□□□□□ -0.69
LDLR-204ENST00000545707 C3orf22Q8N5N4 141 aa10.74□□□□□ -0.69
LDLR-204ENST00000545707 NSD1Q96L73 2696 aaPredicted RBP10.74□□□□□ -0.69
LDLR-204ENST00000545707 COX17Q14061 63 aa10.73□□□□□ -0.69
LDLR-204ENST00000545707 KLK12Q9UKR0 248 aa10.73□□□□□ -0.69
LDLR-204ENST00000545707 J3QKU1 62 aa10.72□□□□□ -0.69
LDLR-204ENST00000545707 NDUFC2O95298 119 aa10.72□□□□□ -0.69
LDLR-204ENST00000545707 TEP1Q99973 2627 aaKnown RBP10.72□□□□□ -0.69
LDLR-204ENST00000545707 INAFM1C9JVW0 142 aa10.72□□□□□ -0.69
LDLR-204ENST00000545707 S100A7L2Q5SY68 101 aa10.72□□□□□ -0.69
LDLR-204ENST00000545707 Q8NAQ8 132 aa10.72□□□□□ -0.69
LDLR-204ENST00000545707 LINC00167Q96N53 147 aa10.72□□□□□ -0.69
LDLR-204ENST00000545707 CCKP06307 115 aa10.71□□□□□ -0.69
LDLR-204ENST00000545707 SPAG11BQ08648 103 aa10.71□□□□□ -0.69
LDLR-204ENST00000545707 CYSRT1A8MQ03 144 aa10.7□□□□□ -0.7
LDLR-204ENST00000545707 PKD1L1Q8TDX9 2849 aa10.69□□□□□ -0.7
LDLR-204ENST00000545707 UQCRQO14949 82 aa10.69□□□□□ -0.7
LDLR-204ENST00000545707 APOC4P55056 127 aa10.69□□□□□ -0.7
LDLR-204ENST00000545707 HIST1H4AP62805 103 aaKnown RBP10.69□□□□□ -0.7
LDLR-204ENST00000545707 Q6JHZ5 121 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms