RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	-0.84	□□□□□ -2.54	2e-6	■■■■□ 25.3
RAP1B-231	ENST00000544639	SBF2	Q86WG5	1849 aa		-0.85	□□□□□ -2.54
RAP1B-231	ENST00000544639	APOB	P04114	4563 aa	Known RBP	-0.85	□□□□□ -2.55
RAP1B-231	ENST00000544639		I3L3M4	83 aa		-0.85	□□□□□ -2.55
RAP1B-231	ENST00000544639	IGLC1	P0CG04	106 aa		-0.85	□□□□□ -2.55
RAP1B-231	ENST00000544639	SELENOW	P63302	87 aa		-0.85	□□□□□ -2.55
RAP1B-231	ENST00000544639	MEIG1	Q5JSS6	88 aa		-0.85	□□□□□ -2.55
RAP1B-231	ENST00000544639	MRPL54	Q6P161	138 aa	Known RBP	-0.85	□□□□□ -2.55
RAP1B-231	ENST00000544639	HEPN1	Q6WQI6	88 aa		-0.85	□□□□□ -2.55
RAP1B-231	ENST00000544639	LCN9	Q8WX39	176 aa		-0.85	□□□□□ -2.55
RAP1B-231	ENST00000544639	SPANXD	Q9BXN6	97 aa		-0.85	□□□□□ -2.55
RAP1B-231	ENST00000544639	NXT2	Q9NPJ8	142 aa	Known RBP	-0.85	□□□□□ -2.55
RAP1B-231	ENST00000544639	KALRN	O60229	2985 aa		-0.85	□□□□□ -2.55
RAP1B-231	ENST00000544639	GCN1	Q92616	2671 aa	Known RBP	-0.85	□□□□□ -2.55
RAP1B-231	ENST00000544639	RAPGEF6	Q8TEU7	1601 aa		-0.86	□□□□□ -2.55
RAP1B-231	ENST00000544639	NKTR	P30414	1462 aa	Known RBP	-0.86	□□□□□ -2.55
RAP1B-231	ENST00000544639	DNHD1	Q96M86	4753 aa		-0.86	□□□□□ -2.55
RAP1B-231	ENST00000544639	LOC285095	A0A1B0GVY8	99 aa		-0.86	□□□□□ -2.55
RAP1B-231	ENST00000544639	GNG7	O60262	68 aa		-0.86	□□□□□ -2.55
RAP1B-231	ENST00000544639	SEC11A	P67812	179 aa		-0.86	□□□□□ -2.55
RAP1B-231	ENST00000544639	FAM167A-AS1	Q96KT0	104 aa		-0.86	□□□□□ -2.55
RAP1B-231	ENST00000544639	SPRR4	Q96PI1	79 aa		-0.86	□□□□□ -2.55
RAP1B-231	ENST00000544639	PRO1933	Q9H354	126 aa		-0.86	□□□□□ -2.55
RAP1B-231	ENST00000544639	CCDC141	Q6ZP82	1450 aa		-0.86	□□□□□ -2.55
RAP1B-231	ENST00000544639	ACACA	Q13085	2346 aa		-0.87	□□□□□ -2.55
RAP1B-231	ENST00000544639	TRIO	O75962	3097 aa		-0.87	□□□□□ -2.55
RAP1B-231	ENST00000544639	CPSF1	Q10570	1443 aa	Known RBP	-0.87	□□□□□ -2.55
RAP1B-231	ENST00000544639	TRAV30	A0A087WSZ9	112 aa		-0.87	□□□□□ -2.55
RAP1B-231	ENST00000544639	LOC100130705	A0A1B0GUX0	176 aa		-0.87	□□□□□ -2.55
RAP1B-231	ENST00000544639	CHKB-CPT1B	H3BT56	60 aa		-0.87	□□□□□ -2.55
RAP1B-231	ENST00000544639	ZZEF1	O43149	2961 aa		-0.87	□□□□□ -2.55
RAP1B-231	ENST00000544639	BTG2	P78543	158 aa		-0.87	□□□□□ -2.55
RAP1B-231	ENST00000544639	LELP1	Q5T871	98 aa		-0.87	□□□□□ -2.55
RAP1B-231	ENST00000544639	FAM223A	Q8IWN6	122 aa		-0.87	□□□□□ -2.55
RAP1B-231	ENST00000544639	PPP3R2	Q96LZ3	170 aa		-0.87	□□□□□ -2.55
RAP1B-231	ENST00000544639	LINC00470	Q9BZP3	86 aa		-0.87	□□□□□ -2.55
RAP1B-231	ENST00000544639	ARL2-SNX15	V9GYD0	113 aa		-0.87	□□□□□ -2.55
RAP1B-231	ENST00000544639	RIF1	Q5UIP0	2472 aa	Known RBP	-0.87	□□□□□ -2.55
RAP1B-231	ENST00000544639	LRRK2	Q5S007	2527 aa		-0.87	□□□□□ -2.55
RAP1B-231	ENST00000544639	PKD1L2	Q7Z442	2459 aa		-0.88	□□□□□ -2.55
RAP1B-231	ENST00000544639	PAPPA2	Q9BXP8	1791 aa		-0.88	□□□□□ -2.55
RAP1B-231	ENST00000544639	ANKRD50	Q9ULJ7	1429 aa		-0.88	□□□□□ -2.55
RAP1B-231	ENST00000544639	RELN	P78509	3460 aa		-0.88	□□□□□ -2.55
RAP1B-231	ENST00000544639	MTOR	P42345	2549 aa		-0.88	□□□□□ -2.55
RAP1B-231	ENST00000544639	C9orf92	A6NGG3	77 aa		-0.88	□□□□□ -2.55
RAP1B-231	ENST00000544639	MIF4GD	A9UHW6	222 aa	Known RBP	-0.88	□□□□□ -2.55
RAP1B-231	ENST00000544639	WHAMMP3	Q1A5X7	153 aa		-0.88	□□□□□ -2.55
RAP1B-231	ENST00000544639		Q56UQ5	140 aa		-0.88	□□□□□ -2.55
RAP1B-231	ENST00000544639	WFDC13	Q8IUB5	93 aa		-0.88	□□□□□ -2.55
RAP1B-231	ENST00000544639	ARL11	Q969Q4	196 aa		-0.88	□□□□□ -2.55
RAP1B-231	ENST00000544639	CDC42SE2	Q9NRR3	84 aa		-0.88	□□□□□ -2.55
RAP1B-231	ENST00000544639	C1orf167	Q5SNV9	1468 aa		-0.88	□□□□□ -2.55
RAP1B-231	ENST00000544639	QRICH2	Q9H0J4	1663 aa		-0.88	□□□□□ -2.55
RAP1B-231	ENST00000544639	DNAH7	Q8WXX0	4024 aa		-0.88	□□□□□ -2.55
RAP1B-231	ENST00000544639	NBEA	Q8NFP9	2946 aa		-0.88	□□□□□ -2.55
RAP1B-231	ENST00000544639	CMYA5	Q8N3K9	4069 aa		-0.89	□□□□□ -2.55
RAP1B-231	ENST00000544639		A0A1B0GU69	56 aa		-0.89	□□□□□ -2.55
RAP1B-231	ENST00000544639	FAM25A	B3EWG3	89 aa		-0.89	□□□□□ -2.55
RAP1B-231	ENST00000544639	FAM25C	B3EWG5	89 aa		-0.89	□□□□□ -2.55
RAP1B-231	ENST00000544639	FAM25G	B3EWG6	89 aa		-0.89	□□□□□ -2.55
RAP1B-231	ENST00000544639	SNCA	P37840	140 aa		-0.89	□□□□□ -2.55
RAP1B-231	ENST00000544639	CATR1	Q13166	79 aa		-0.89	□□□□□ -2.55
RAP1B-231	ENST00000544639	MRPL34	Q9BQ48	92 aa	Known RBP	-0.89	□□□□□ -2.55
RAP1B-231	ENST00000544639	UQCR10	Q9UDW1	63 aa		-0.89	□□□□□ -2.55
RAP1B-231	ENST00000544639	CDKN2A-AS1	Q9UH64	79 aa		-0.89	□□□□□ -2.55
RAP1B-231	ENST00000544639	NLRP1	Q9C000	1473 aa		-0.89	□□□□□ -2.55
RAP1B-231	ENST00000544639	REV3L	O60673	3130 aa		-0.9	□□□□□ -2.55
RAP1B-231	ENST00000544639	ARHGEF5	Q12774	1597 aa		-0.9	□□□□□ -2.55
RAP1B-231	ENST00000544639	MBD5	Q9P267	1494 aa		-0.9	□□□□□ -2.55
RAP1B-231	ENST00000544639		A0A1B0GWA3	101 aa		-0.9	□□□□□ -2.55
RAP1B-231	ENST00000544639	CCL22	O00626	93 aa		-0.9	□□□□□ -2.55
RAP1B-231	ENST00000544639	COMMD6	Q7Z4G1	85 aa		-0.9	□□□□□ -2.55
RAP1B-231	ENST00000544639	C5orf38	Q86SI9	138 aa		-0.9	□□□□□ -2.55
RAP1B-231	ENST00000544639	MYOZ3	Q8TDC0	251 aa		-0.9	□□□□□ -2.55
RAP1B-231	ENST00000544639		A0A0G2JMZ2	1700 aa		-0.9	□□□□□ -2.55
RAP1B-231	ENST00000544639	CIC	Q96RK0	1608 aa	Predicted RBP	-0.9	□□□□□ -2.55
RAP1B-231	ENST00000544639	COL12A1	Q99715	3063 aa		-0.9	□□□□□ -2.55
RAP1B-231	ENST00000544639	TET3	O43151	1660 aa		-0.91	□□□□□ -2.55
RAP1B-231	ENST00000544639	ZFHX3	Q15911	3703 aa		-0.91	□□□□□ -2.55
RAP1B-231	ENST00000544639	MYH7	P12883	1935 aa		-0.91	□□□□□ -2.55
RAP1B-231	ENST00000544639	PLEKHH2	Q8IVE3	1493 aa		-0.91	□□□□□ -2.55
RAP1B-231	ENST00000544639	DNAH1	Q9P2D7	4330 aa		-0.91	□□□□□ -2.55
RAP1B-231	ENST00000544639	SACS	Q9NZJ4	4579 aa		-0.91	□□□□□ -2.55
RAP1B-231	ENST00000544639	OOSP1	A8MZH6	123 aa		-0.91	□□□□□ -2.56
RAP1B-231	ENST00000544639	NDUFA2	O43678	99 aa		-0.91	□□□□□ -2.56
RAP1B-231	ENST00000544639	C9orf153	Q5TBE3	101 aa		-0.91	□□□□□ -2.56
RAP1B-231	ENST00000544639	SFTA2	Q6UW10	78 aa		-0.91	□□□□□ -2.56
RAP1B-231	ENST00000544639	C6orf201	Q7Z4U5	140 aa		-0.91	□□□□□ -2.56
RAP1B-231	ENST00000544639	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	-0.91	□□□□□ -2.56
RAP1B-231	ENST00000544639	HIGD1B	Q9P298	99 aa		-0.91	□□□□□ -2.56
RAP1B-231	ENST00000544639	CCDC168	Q8NDH2	2452 aa		-0.91	□□□□□ -2.56
RAP1B-231	ENST00000544639	MYOM1	P52179	1685 aa		-0.91	□□□□□ -2.56
RAP1B-231	ENST00000544639	BTAF1	O14981	1849 aa		-0.92	□□□□□ -2.56
RAP1B-231	ENST00000544639	XRN1	Q8IZH2	1706 aa	Known RBP	-0.92	□□□□□ -2.56
RAP1B-231	ENST00000544639	MARF1	Q9Y4F3	1742 aa	Known RBP	-0.92	□□□□□ -2.56
RAP1B-231	ENST00000544639	DYNC1H1	Q14204	4646 aa	Known RBP	-0.92	□□□□□ -2.56
RAP1B-231	ENST00000544639	EHBP1L1	Q8N3D4	1523 aa		-0.92	□□□□□ -2.56
RAP1B-231	ENST00000544639	FAM223B	A6NKX1	122 aa		-0.92	□□□□□ -2.56
RAP1B-231	ENST00000544639	APOC2	P02655	101 aa		-0.92	□□□□□ -2.56
RAP1B-231	ENST00000544639	C8orf59	Q8N0T1	100 aa	Predicted RBP	-0.92	□□□□□ -2.56

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms