RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 KPNA4O00629 521 aaPredicted RBP0.2□□□□□ -2.38
YBX3-214ENST00000544501 PRH1P02810 166 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 CD3DP04234 171 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 MPC1LP0DKB6 136 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 APELAP0DMC3 54 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 DEFB130BP0DP73 79 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 DEFB130AP0DP74 79 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 GNG10P50151 68 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 SPINK7P58062 85 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 SNRPD3P62318 126 aaKnown RBP0.2□□□□□ -2.38
YBX3-214ENST00000544501 SARNPP82979 210 aaKnown RBP0.2□□□□□ -2.38
YBX3-214ENST00000544501 QRFPP83859 136 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 IQCJQ1A5X6 159 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 KRTAP19-8Q3LI54 63 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 LINC01556Q5JQF7 62 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 TRIQKQ629K1 86 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 SLC48A1Q6P1K1 146 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 UNQ5815/PRO19632Q6UWF5 114 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 STX12Q86Y82 276 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 OR5AK2Q8NH90 309 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 ATP6V0E2Q8NHE4 81 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 CARD19Q96LW7 228 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 MCEEQ96PE7 176 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 FAM103A1Q9BTL3 118 aaKnown RBP0.2□□□□□ -2.38
YBX3-214ENST00000544501 LPAR5Q9H1C0 372 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 HSPB8Q9UJY1 196 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 UBE2D4Q9Y2X8 147 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 V9GYQ6 96 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 TRDV1A0A1B0GX56 115 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 PRORSD1PA6NEY8 169 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 BBIP1A8MTZ0 92 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 TMEM238C9JI98 176 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 PPP5D1E7EU14 171 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 FXYD1O00168 92 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 CDC42EP2O14613 210 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 NEFHP12036 1026 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 IL7P13232 177 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 S100A11P31949 105 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 SDC2P34741 201 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 CRYBA4P53673 196 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 NDUFA6P56556 154 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 DEFB131AP59861 70 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 DCUN1D2Q6PH85 259 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 LYPD5Q6UWN5 251 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 HEPN1Q6WQI6 88 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 LINC00299Q6ZSB3 139 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 GRPEL2Q8TAA5 225 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 PLAC4Q8WY50 150 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 USMG5Q96IX5 58 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 PRELID3AQ96N28 172 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 BIN3Q9NQY0 253 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 NDUFA12Q9UI09 145 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 TRAPPC2LQ9UL33 140 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 NUBP2Q9Y5Y2 271 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 LINC00312Q9Y6C7 94 aa0.19□□□□□ -2.38
YBX3-214ENST00000544501 TRAV2A0A0B4J234 112 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 MAP1LC3B2A6NCE7 125 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 FAM223BA6NKX1 122 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 TMEM14DPA8MWL7 114 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 E5RI56 91 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 H7BYZ3 331 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 EDF1O60869 148 aaKnown RBP0.18□□□□□ -2.38
YBX3-214ENST00000544501 SULT1C4O75897 302 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 NDUFA3O95167 84 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 IGHV3-30P01768 117 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 IGHV3-33P01772 117 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 TRACP01848 142 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 GYPBP06028 91 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 IGHV3-30-5P0DP03 117 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 TPT1P13693 172 aaKnown RBP0.18□□□□□ -2.38
YBX3-214ENST00000544501 POLR2HP52434 150 aaKnown RBP0.18□□□□□ -2.38
YBX3-214ENST00000544501 FOXA3P55318 350 aaPredicted RBP0.18□□□□□ -2.38
YBX3-214ENST00000544501 EDDM3BP56851 147 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 FXYD6P3P58550 94 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 RPL37P61927 97 aaKnown RBP0.18□□□□□ -2.38
YBX3-214ENST00000544501 ZNF56Q15929 161 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 CSAG1Q6PB30 78 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 HRCT1Q6UXD1 115 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 LINC00305Q7Z4B0 112 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 PRR15Q8IV56 129 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 FAM223AQ8IWN6 122 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 LINC00269Q8N2A0 174 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 MMGT1Q8N4V1 131 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 C5orf17Q8NAS9 161 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 BRK1Q8WUW1 75 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 PLEKHB2Q96CS7 222 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 TTTY10Q9BZA0 68 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 COA4Q9NYJ1 87 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 ATPIF1Q9UII2 106 aa0.18□□□□□ -2.38
YBX3-214ENST00000544501 FXYD6-FXYD2A0A087WZ82 144 aa0.17□□□□□ -2.38
YBX3-214ENST00000544501 A0A096LNI7 61 aa0.17□□□□□ -2.38
YBX3-214ENST00000544501 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.17□□□□□ -2.38
YBX3-214ENST00000544501 PVALEFA0A1B0GWK0 134 aa0.17□□□□□ -2.38
YBX3-214ENST00000544501 H0YAA0 97 aa0.17□□□□□ -2.38
YBX3-214ENST00000544501 NDUFA4O00483 81 aa0.17□□□□□ -2.38
YBX3-214ENST00000544501 IGKCP01834 107 aa0.17□□□□□ -2.38
YBX3-214ENST00000544501 MT1EP04732 61 aa0.17□□□□□ -2.38
YBX3-214ENST00000544501 IFI6P09912 130 aa0.17□□□□□ -2.38
YBX3-214ENST00000544501 PDE6GP18545 87 aa0.17□□□□□ -2.38
YBX3-214ENST00000544501 UBE2D3P61077 147 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms