RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 PPDPFQ9H3Y8 114 aa11.17□□□□□ -0.62
SCNN1A-221ENST00000543768 A0A096LPF7 62 aa11.16□□□□□ -0.62
SCNN1A-221ENST00000543768 TRBV7-7A0A0K0K1E9 115 aa11.16□□□□□ -0.62
SCNN1A-221ENST00000543768 IGHV4-28A0A0C4DH34 117 aa11.16□□□□□ -0.62
SCNN1A-221ENST00000543768 PAX4O43316 350 aa11.16□□□□□ -0.62
SCNN1A-221ENST00000543768 C5orf38Q86SI9 138 aa11.16□□□□□ -0.62
SCNN1A-221ENST00000543768 TMEM126AQ9H061 195 aa11.16□□□□□ -0.62
SCNN1A-221ENST00000543768 LST1O00453 97 aa11.15□□□□□ -0.62
SCNN1A-221ENST00000543768 TRRAPQ9Y4A5 3859 aa11.14□□□□□ -0.63
SCNN1A-221ENST00000543768 WFDC9Q8NEX5 89 aa11.14□□□□□ -0.63
SCNN1A-221ENST00000543768 TEP1Q99973 2627 aaKnown RBP11.13□□□□□ -0.63
SCNN1A-221ENST00000543768 MIR7-3HGQ8N6C7 128 aa11.13□□□□□ -0.63
SCNN1A-221ENST00000543768 Q8NAQ8 132 aa11.13□□□□□ -0.63
SCNN1A-221ENST00000543768 ATRQ13535 2644 aa11.12□□□□□ -0.63
SCNN1A-221ENST00000543768 CELA1Q9UNI1 258 aa11.12□□□□□ -0.63
SCNN1A-221ENST00000543768 DAD1P61803 113 aa11.11□□□□□ -0.63
SCNN1A-221ENST00000543768 WIPF1O43516 503 aa11.1□□□□□ -0.63
SCNN1A-221ENST00000543768 XCL1P47992 114 aa11.1□□□□□ -0.63
SCNN1A-221ENST00000543768 SS18Q15532 418 aa11.1□□□□□ -0.63
SCNN1A-221ENST00000543768 MIFP14174 115 aa11.1□□□□□ -0.63
SCNN1A-221ENST00000543768 CLPSL2Q6UWE3 100 aa11.1□□□□□ -0.63
SCNN1A-221ENST00000543768 COX7A2LO14548 114 aa11.09□□□□□ -0.63
SCNN1A-221ENST00000543768 IMUPQ9GZP8 106 aa11.09□□□□□ -0.63
SCNN1A-221ENST00000543768 IBA57-AS1B1ANH7 110 aa11.09□□□□□ -0.63
SCNN1A-221ENST00000543768 LINC00158P58513 81 aa11.09□□□□□ -0.63
SCNN1A-221ENST00000543768 IGHV4-30-4P0DP06 118 aa11.08□□□□□ -0.64
SCNN1A-221ENST00000543768 C3orf56Q8N813 242 aa11.08□□□□□ -0.64
SCNN1A-221ENST00000543768 IGKV2-28A0A075B6P5 120 aa11.08□□□□□ -0.64
SCNN1A-221ENST00000543768 FAM236AA0A1B0GUQ0 79 aa11.08□□□□□ -0.64
SCNN1A-221ENST00000543768 FAM236BA0A1B0GV22 79 aa11.08□□□□□ -0.64
SCNN1A-221ENST00000543768 IGKV2D-28P01615 120 aa11.08□□□□□ -0.64
SCNN1A-221ENST00000543768 ATP5G1P05496 136 aa11.08□□□□□ -0.64
SCNN1A-221ENST00000543768 ACYP1P07311 99 aa11.08□□□□□ -0.64
SCNN1A-221ENST00000543768 SND1-IT1Q9HBX3 110 aa11.07□□□□□ -0.64
SCNN1A-221ENST00000543768 CCL18P55774 89 aa11.06□□□□□ -0.64
SCNN1A-221ENST00000543768 C6orf226Q5I0X4 101 aa11.06□□□□□ -0.64
SCNN1A-221ENST00000543768 LINC00269Q8N2A0 174 aa11.06□□□□□ -0.64
SCNN1A-221ENST00000543768 Q8N3U1 123 aa11.06□□□□□ -0.64
SCNN1A-221ENST00000543768 LINC00337Q8N6G1 96 aa11.06□□□□□ -0.64
SCNN1A-221ENST00000543768 TRAV13-2A0A0B4J235 113 aa11.05□□□□□ -0.64
SCNN1A-221ENST00000543768 PFN2P35080 140 aa11.05□□□□□ -0.64
SCNN1A-221ENST00000543768 SPART-AS1P0CW21 52 aa11.05□□□□□ -0.64
SCNN1A-221ENST00000543768 Q8IZM0 81 aa11.05□□□□□ -0.64
SCNN1A-221ENST00000543768 LINC01561Q8N1V8 128 aa11.05□□□□□ -0.64
SCNN1A-221ENST00000543768 C11orf68Q9H3H3 251 aaKnown RBP11.05□□□□□ -0.64
SCNN1A-221ENST00000543768 BAHCC1Q9P281 2608 aa11.05□□□□□ -0.64
SCNN1A-221ENST00000543768 FLNBO75369 2602 aaKnown RBP11.04□□□□□ -0.64
SCNN1A-221ENST00000543768 CRPP02741 224 aa11.03□□□□□ -0.64
SCNN1A-221ENST00000543768 RPL28P46779 137 aaKnown RBP11.03□□□□□ -0.64
SCNN1A-221ENST00000543768 CD164L2Q6UWJ8 174 aa11.03□□□□□ -0.64
SCNN1A-221ENST00000543768 ANGP03950 147 aaKnown RBP11.02□□□□□ -0.65
SCNN1A-221ENST00000543768 C9orf153Q5TBE3 101 aa11.02□□□□□ -0.65
SCNN1A-221ENST00000543768 C3orf22Q8N5N4 141 aa11.02□□□□□ -0.65
SCNN1A-221ENST00000543768 REG3AQ06141 175 aa11.02□□□□□ -0.65
SCNN1A-221ENST00000543768 CHCHD10Q8WYQ3 142 aaPredicted RBP11.02□□□□□ -0.65
SCNN1A-221ENST00000543768 FAM218AQ96MZ4 157 aa11.02□□□□□ -0.65
SCNN1A-221ENST00000543768 HTN3P15516 51 aa11.01□□□□□ -0.65
SCNN1A-221ENST00000543768 KIAA0087Q14695 138 aa11.01□□□□□ -0.65
SCNN1A-221ENST00000543768 LINC00643Q86TS7 51 aa11.01□□□□□ -0.65
SCNN1A-221ENST00000543768 IGLV10-54A0A075B6I4 117 aa11.01□□□□□ -0.65
SCNN1A-221ENST00000543768 UQCRQO14949 82 aa11□□□□□ -0.65
SCNN1A-221ENST00000543768 TRACP01848 142 aa11□□□□□ -0.65
SCNN1A-221ENST00000543768 SMCR5Q8TEV8 140 aa11□□□□□ -0.65
SCNN1A-221ENST00000543768 OXLD1Q5BKU9 147 aa10.99□□□□□ -0.65
SCNN1A-221ENST00000543768 LELP1Q5T871 98 aa10.98□□□□□ -0.65
SCNN1A-221ENST00000543768 SMIM11BQ8TCY0 68 aa10.98□□□□□ -0.65
SCNN1A-221ENST00000543768 LINC00526Q96FQ7 95 aa10.98□□□□□ -0.65
SCNN1A-221ENST00000543768 KRTAP10-11P60412 298 aa10.97□□□□□ -0.65
SCNN1A-221ENST00000543768 SDIM1Q6ZPB5 146 aa10.97□□□□□ -0.65
SCNN1A-221ENST00000543768 F8P00451 2351 aa10.95□□□□□ -0.66
SCNN1A-221ENST00000543768 CXCL5P42830 114 aa10.95□□□□□ -0.66
SCNN1A-221ENST00000543768 MALP21145 153 aa10.95□□□□□ -0.66
SCNN1A-221ENST00000543768 C22orf24Q9Y442 160 aa10.95□□□□□ -0.66
SCNN1A-221ENST00000543768 BAALC-AS2P0C853 105 aa10.94□□□□□ -0.66
SCNN1A-221ENST00000543768 RETNQ9HD89 108 aa10.93□□□□□ -0.66
SCNN1A-221ENST00000543768 PRR34Q9NV39 138 aa10.93□□□□□ -0.66
SCNN1A-221ENST00000543768 COX7CP15954 63 aa10.92□□□□□ -0.66
SCNN1A-221ENST00000543768 COX17Q14061 63 aa10.92□□□□□ -0.66
SCNN1A-221ENST00000543768 KRTAP24-1Q3LI83 254 aa10.92□□□□□ -0.66
SCNN1A-221ENST00000543768 LYPD5Q6UWN5 251 aa10.92□□□□□ -0.66
SCNN1A-221ENST00000543768 Q9HAA7 133 aa10.92□□□□□ -0.66
SCNN1A-221ENST00000543768 C9orf116Q5BN46 136 aaPredicted RBP10.91□□□□□ -0.66
SCNN1A-221ENST00000543768 OR13C6PQ8NH95 151 aa10.91□□□□□ -0.66
SCNN1A-221ENST00000543768 KLK12Q9UKR0 248 aa10.91□□□□□ -0.66
SCNN1A-221ENST00000543768 A0A087WYN8 130 aa10.91□□□□□ -0.66
SCNN1A-221ENST00000543768 LOC107984640A0A0U1RRK4 108 aa10.91□□□□□ -0.66
SCNN1A-221ENST00000543768 A0A1B0GX51 115 aa10.91□□□□□ -0.66
SCNN1A-221ENST00000543768 J3KT08 172 aa10.91□□□□□ -0.66
SCNN1A-221ENST00000543768 H0YGX0 51 aa10.9□□□□□ -0.66
SCNN1A-221ENST00000543768 ENHOQ6UWT2 76 aa10.9□□□□□ -0.66
SCNN1A-221ENST00000543768 KLK5Q9Y337 293 aaPredicted RBP10.9□□□□□ -0.66
SCNN1A-221ENST00000543768 EGFEM1PQ0D2K5 195 aa10.9□□□□□ -0.66
SCNN1A-221ENST00000543768 PRR3P79522 188 aaKnown RBP10.89□□□□□ -0.67
SCNN1A-221ENST00000543768 C2orf48Q96LS8 159 aa10.89□□□□□ -0.67
SCNN1A-221ENST00000543768 INAFM2P0DMQ5 153 aa10.88□□□□□ -0.67
SCNN1A-221ENST00000543768 CRYGAP11844 174 aa10.88□□□□□ -0.67
SCNN1A-221ENST00000543768 C6orf223Q8N319 242 aa10.88□□□□□ -0.67
SCNN1A-221ENST00000543768 ANK2Q01484 3957 aa10.88□□□□□ -0.67
SCNN1A-221ENST00000543768 NDUFC2O95298 119 aa10.88□□□□□ -0.67
SCNN1A-221ENST00000543768 HIST1H4AP62805 103 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms