RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 FAM208BQ5VWN6 2430 aa3.47□□□□□ -1.85
LMO3-229ENST00000543721 RNASE1P07998 156 aaKnown RBP3.47□□□□□ -1.85
LMO3-229ENST00000543721 RPL35AP18077 110 aaKnown RBP3.47□□□□□ -1.85
LMO3-229ENST00000543721 Q8N3U1 123 aa3.47□□□□□ -1.85
LMO3-229ENST00000543721 PTPRQQ9UMZ3 2332 aa3.47□□□□□ -1.85
LMO3-229ENST00000543721 IGLV4-60A0A075B6I1 120 aa3.46□□□□□ -1.85
LMO3-229ENST00000543721 IGHV4-28A0A0C4DH34 117 aa3.46□□□□□ -1.85
LMO3-229ENST00000543721 ZNF702PQ9H963 129 aa3.46□□□□□ -1.85
LMO3-229ENST00000543721 NOP10Q9NPE3 64 aaKnown RBP3.46□□□□□ -1.85
LMO3-229ENST00000543721 A0A096LNT2 108 aa3.46□□□□□ -1.86
LMO3-229ENST00000543721 TRAV10A0A0B4J240 114 aa3.46□□□□□ -1.86
LMO3-229ENST00000543721 TRBV7-4A0A0J9YYF1 115 aa3.46□□□□□ -1.86
LMO3-229ENST00000543721 NREPQ16612 68 aa3.46□□□□□ -1.86
LMO3-229ENST00000543721 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.46□□□□□ -1.86
LMO3-229ENST00000543721 LINC01356Q8N9X3 169 aa3.46□□□□□ -1.86
LMO3-229ENST00000543721 SNURFQ9Y675 71 aa3.46□□□□□ -1.86
LMO3-229ENST00000543721 NOTCH3Q9UM47 2321 aa3.46□□□□□ -1.86
LMO3-229ENST00000543721 CCL24O00175 119 aa3.46□□□□□ -1.86
LMO3-229ENST00000543721 TMEM254Q8TBM7 123 aa3.46□□□□□ -1.86
LMO3-229ENST00000543721 PKIGQ9Y2B9 76 aa3.46□□□□□ -1.86
LMO3-229ENST00000543721 TNRC18O15417 2968 aaPredicted RBP3.46□□□□□ -1.86
LMO3-229ENST00000543721 MYO15AQ9UKN7 3530 aa3.46□□□□□ -1.86
LMO3-229ENST00000543721 ODF3L2Q3SX64 289 aa3.45□□□□□ -1.86
LMO3-229ENST00000543721 BRK1Q8WUW1 75 aa3.45□□□□□ -1.86
LMO3-229ENST00000543721 Q6YL49 198 aa3.45□□□□□ -1.86
LMO3-229ENST00000543721 WFDC11Q8NEX6 87 aa3.45□□□□□ -1.86
LMO3-229ENST00000543721 FLNBO75369 2602 aaKnown RBP3.45□□□□□ -1.86
LMO3-229ENST00000543721 IGHV4-30-2A0A087WSY4 118 aa3.45□□□□□ -1.86
LMO3-229ENST00000543721 CD164L2Q6UWJ8 174 aa3.45□□□□□ -1.86
LMO3-229ENST00000543721 SORL1Q92673 2214 aa3.45□□□□□ -1.86
LMO3-229ENST00000543721 ACACBO00763 2458 aa3.45□□□□□ -1.86
LMO3-229ENST00000543721 CELSR3Q9NYQ7 3312 aa3.45□□□□□ -1.86
LMO3-229ENST00000543721 BPY2O14599 106 aa3.44□□□□□ -1.86
LMO3-229ENST00000543721 FUSP35637 526 aaKnown RBP eCLIP3.44□□□□□ -1.86
LMO3-229ENST00000543721 ESRGQ1W209 222 aa3.44□□□□□ -1.86
LMO3-229ENST00000543721 PRYO14603 147 aa3.44□□□□□ -1.86
LMO3-229ENST00000543721 GNLYP22749 145 aa3.44□□□□□ -1.86
LMO3-229ENST00000543721 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.44□□□□□ -1.86
LMO3-229ENST00000543721 PLA2G2AP14555 144 aa3.44□□□□□ -1.86
LMO3-229ENST00000543721 DIRC1Q969H9 104 aa3.44□□□□□ -1.86
LMO3-229ENST00000543721 ZFYVE26Q68DK2 2539 aa3.43□□□□□ -1.86
LMO3-229ENST00000543721 LOC100131303A0A0U1RQF7 123 aa3.43□□□□□ -1.86
LMO3-229ENST00000543721 COX7BP24311 80 aa3.43□□□□□ -1.86
LMO3-229ENST00000543721 DEFB136Q30KP8 78 aa3.43□□□□□ -1.86
LMO3-229ENST00000543721 SPATA3Q8NHX4 192 aa3.43□□□□□ -1.86
LMO3-229ENST00000543721 TM2D3Q9BRN9 247 aa3.43□□□□□ -1.86
LMO3-229ENST00000543721 ANKRD11Q6UB99 2663 aaPredicted RBP3.43□□□□□ -1.86
LMO3-229ENST00000543721 IGLV6-57P01721 117 aa3.43□□□□□ -1.86
LMO3-229ENST00000543721 IGHV4-31P0DP07 118 aa3.43□□□□□ -1.86
LMO3-229ENST00000543721 Q6ZQY7 126 aa3.43□□□□□ -1.86
LMO3-229ENST00000543721 SPTBN4Q9H254 2564 aa3.43□□□□□ -1.86
LMO3-229ENST00000543721 A0A1B0GW54 56 aa3.43□□□□□ -1.86
LMO3-229ENST00000543721 PLAC8L1A1L4L8 177 aa3.43□□□□□ -1.86
LMO3-229ENST00000543721 KIAA0087Q14695 138 aa3.43□□□□□ -1.86
LMO3-229ENST00000543721 CCDC168Q8NDH2 2452 aa3.42□□□□□ -1.86
LMO3-229ENST00000543721 ABCA2Q9BZC7 2435 aa3.42□□□□□ -1.86
LMO3-229ENST00000543721 A0A0U1RQV1 116 aa3.42□□□□□ -1.86
LMO3-229ENST00000543721 PRR3P79522 188 aaKnown RBP3.42□□□□□ -1.86
LMO3-229ENST00000543721 ZNF843Q8N446 348 aa3.42□□□□□ -1.86
LMO3-229ENST00000543721 LINC00474Q9P2X8 69 aa3.42□□□□□ -1.86
LMO3-229ENST00000543721 PIEZO2Q9H5I5 2752 aa3.41□□□□□ -1.86
LMO3-229ENST00000543721 A0A0J9YWU9 116 aa3.41□□□□□ -1.86
LMO3-229ENST00000543721 FSHBP01225 129 aa3.41□□□□□ -1.86
LMO3-229ENST00000543721 IGHV4-30-4P0DP06 118 aa3.41□□□□□ -1.86
LMO3-229ENST00000543721 C18orf65Q6ZTR6 163 aa3.41□□□□□ -1.86
LMO3-229ENST00000543721 CHCHD10Q8WYQ3 142 aaPredicted RBP3.41□□□□□ -1.86
LMO3-229ENST00000543721 POLQO75417 2590 aa3.41□□□□□ -1.86
LMO3-229ENST00000543721 GVQW2A0A096LPI5 108 aaPredicted RBP3.4□□□□□ -1.86
LMO3-229ENST00000543721 C19orf84I3L1E1 186 aa3.4□□□□□ -1.86
LMO3-229ENST00000543721 GYPEP15421 78 aa3.4□□□□□ -1.86
LMO3-229ENST00000543721 PRR15Q8IV56 129 aa3.4□□□□□ -1.86
LMO3-229ENST00000543721 OCR1Q9BZK8 76 aa3.4□□□□□ -1.86
LMO3-229ENST00000543721 PRO0255Q9UI72 69 aa3.4□□□□□ -1.86
LMO3-229ENST00000543721 KALRNO60229 2985 aa3.4□□□□□ -1.87
LMO3-229ENST00000543721 CFAP47Q6ZTR5 3102 aa3.4□□□□□ -1.87
LMO3-229ENST00000543721 M0R2N4 97 aa3.4□□□□□ -1.87
LMO3-229ENST00000543721 SPAG11BQ08648 103 aa3.4□□□□□ -1.87
LMO3-229ENST00000543721 LINC00612Q8N6U2 182 aa3.4□□□□□ -1.87
LMO3-229ENST00000543721 MPLKIPQ8TAP9 179 aa3.4□□□□□ -1.87
LMO3-229ENST00000543721 HIGD2BQ4VC39 106 aa3.39□□□□□ -1.87
LMO3-229ENST00000543721 ZNF73O43830 326 aaPredicted RBP3.39□□□□□ -1.87
LMO3-229ENST00000543721 ELOF1P60002 83 aaKnown RBP3.39□□□□□ -1.87
LMO3-229ENST00000543721 REG3AQ06141 175 aa3.39□□□□□ -1.87
LMO3-229ENST00000543721 Q1T7F1 81 aa3.39□□□□□ -1.87
LMO3-229ENST00000543721 Q6ZTC4 211 aa3.39□□□□□ -1.87
LMO3-229ENST00000543721 LINC00269Q8N2A0 174 aa3.39□□□□□ -1.87
LMO3-229ENST00000543721 ABCA12Q86UK0 2595 aa3.39□□□□□ -1.87
LMO3-229ENST00000543721 IGKV4-1P06312 121 aa3.39□□□□□ -1.87
LMO3-229ENST00000543721 GIG44P09565 113 aaPredicted RBP3.39□□□□□ -1.87
LMO3-229ENST00000543721 SCXQ7RTU7 201 aa3.39□□□□□ -1.87
LMO3-229ENST00000543721 ANGP03950 147 aaKnown RBP3.38□□□□□ -1.87
LMO3-229ENST00000543721 PMAIP1Q13794 54 aa3.38□□□□□ -1.87
LMO3-229ENST00000543721 CSNK1G2-AS1Q8NCQ2 148 aa3.38□□□□□ -1.87
LMO3-229ENST00000543721 ESM1Q9NQ30 184 aa3.38□□□□□ -1.87
LMO3-229ENST00000543721 Q6ZRU5 148 aa3.38□□□□□ -1.87
LMO3-229ENST00000543721 TLN1Q9Y490 2541 aaKnown RBP3.38□□□□□ -1.87
LMO3-229ENST00000543721 CSPG4Q6UVK1 2322 aa3.38□□□□□ -1.87
LMO3-229ENST00000543721 hDV103S1A0JD37 113 aa3.38□□□□□ -1.87
LMO3-229ENST00000543721 LYRM9A8MSI8 78 aa3.38□□□□□ -1.87
LMO3-229ENST00000543721 JMJD1CQ15652 2540 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms