RNA–Protein interactions for RNA: ENST00000542293.5

PAAF1-211, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-211ENST00000542293 ARPC5O15511 151 aa8.5□□□□□ -1.05
PAAF1-211ENST00000542293 GATCO43716 136 aaKnown RBP8.5□□□□□ -1.05
PAAF1-211ENST00000542293 PDE6DO43924 150 aa8.5□□□□□ -1.05
PAAF1-211ENST00000542293 C6orf226Q5I0X4 101 aa8.5□□□□□ -1.05
PAAF1-211ENST00000542293 A0A1B0GUT8 65 aa8.49□□□□□ -1.05
PAAF1-211ENST00000542293 A8MWL6 223 aa8.49□□□□□ -1.05
PAAF1-211ENST00000542293 PPP1R2P9O14990 202 aa8.49□□□□□ -1.05
PAAF1-211ENST00000542293 PPP1R17O96001 155 aa8.49□□□□□ -1.05
PAAF1-211ENST00000542293 Q8IZM0 81 aa8.49□□□□□ -1.05
PAAF1-211ENST00000542293 BORCS7Q96B45 105 aa8.49□□□□□ -1.05
PAAF1-211ENST00000542293 SPRR4Q96PI1 79 aa8.49□□□□□ -1.05
PAAF1-211ENST00000542293 TMEM238C9JI98 176 aa8.48□□□□□ -1.05
PAAF1-211ENST00000542293 CBLN2Q8IUK8 224 aa8.48□□□□□ -1.05
PAAF1-211ENST00000542293 NKAPP1Q8N9T2 125 aa8.48□□□□□ -1.05
PAAF1-211ENST00000542293 TMEM126AQ9H061 195 aa8.48□□□□□ -1.05
PAAF1-211ENST00000542293 F8VRH5 84 aa8.47□□□□□ -1.05
PAAF1-211ENST00000542293 Q6ZN92 141 aa8.47□□□□□ -1.05
PAAF1-211ENST00000542293 FAM19A2Q8N3H0 131 aa8.47□□□□□ -1.05
PAAF1-211ENST00000542293 ALKBH7Q9BT30 221 aaPredicted RBP8.47□□□□□ -1.05
PAAF1-211ENST00000542293 SYNE2Q8WXH0 6885 aaKnown RBP8.46□□□□□ -1.05
PAAF1-211ENST00000542293 IGLV4-3A0A075B6K6 122 aa8.46□□□□□ -1.06
PAAF1-211ENST00000542293 COX6B2Q6YFQ2 88 aa8.46□□□□□ -1.06
PAAF1-211ENST00000542293 HIGD1CA8MV81 97 aa8.45□□□□□ -1.06
PAAF1-211ENST00000542293 HIGD2AQ9BW72 106 aa8.45□□□□□ -1.06
PAAF1-211ENST00000542293 GNB1LQ9BYB4 327 aa8.45□□□□□ -1.06
PAAF1-211ENST00000542293 M0R378 163 aa8.44□□□□□ -1.06
PAAF1-211ENST00000542293 TCAPO15273 167 aa8.44□□□□□ -1.06
PAAF1-211ENST00000542293 FAM231DQ6ZW35 169 aa8.44□□□□□ -1.06
PAAF1-211ENST00000542293 C20orf78Q9BR46 151 aa8.44□□□□□ -1.06
PAAF1-211ENST00000542293 MACF1Q9UPN3 7388 aaKnown RBP8.43□□□□□ -1.06
PAAF1-211ENST00000542293 IFI27P40305 119 aaPredicted RBP8.43□□□□□ -1.06
PAAF1-211ENST00000542293 MRPL51Q4U2R6 128 aaKnown RBP8.43□□□□□ -1.06
PAAF1-211ENST00000542293 CT83Q5H943 113 aa8.43□□□□□ -1.06
PAAF1-211ENST00000542293 ZC2HC1BQ5TFG8 222 aa8.43□□□□□ -1.06
PAAF1-211ENST00000542293 KRTAP9-9Q9BYP9 154 aa8.43□□□□□ -1.06
PAAF1-211ENST00000542293 KRTAP9-4Q9BYQ2 154 aa8.43□□□□□ -1.06
PAAF1-211ENST00000542293 TRBV24-1A0A075B6N3 115 aa8.42□□□□□ -1.06
PAAF1-211ENST00000542293 RPS29P62273 56 aaKnown RBP8.42□□□□□ -1.06
PAAF1-211ENST00000542293 SMIM2Q9BVW6 85 aa8.42□□□□□ -1.06
PAAF1-211ENST00000542293 SLC25A20O43772 301 aa8.41□□□□□ -1.06
PAAF1-211ENST00000542293 TMEM141Q96I45 108 aa8.41□□□□□ -1.06
PAAF1-211ENST00000542293 PYGO1Q9Y3Y4 419 aa8.41□□□□□ -1.06
PAAF1-211ENST00000542293 EIF5A2Q9GZV4 153 aaKnown RBP8.4□□□□□ -1.06
PAAF1-211ENST00000542293 NDUFA13Q9P0J0 144 aa8.4□□□□□ -1.06
PAAF1-211ENST00000542293 CFC1P0CG37 223 aa8.39□□□□□ -1.07
PAAF1-211ENST00000542293 FAM104BQ5XKR9 115 aa8.39□□□□□ -1.07
PAAF1-211ENST00000542293 TEX43Q6ZNM6 134 aa8.39□□□□□ -1.07
PAAF1-211ENST00000542293 KRTAP9-8Q9BYQ0 159 aa8.38□□□□□ -1.07
PAAF1-211ENST00000542293 SMLR1H3BR10 107 aa8.37□□□□□ -1.07
PAAF1-211ENST00000542293 CXCL5P42830 114 aa8.37□□□□□ -1.07
PAAF1-211ENST00000542293 RIGQ13278 110 aa8.37□□□□□ -1.07
PAAF1-211ENST00000542293 ZNF345Q14585 488 aa8.37□□□□□ -1.07
PAAF1-211ENST00000542293 LINC00862A6NCI5 91 aa8.36□□□□□ -1.07
PAAF1-211ENST00000542293 CKS2P33552 79 aa8.36□□□□□ -1.07
PAAF1-211ENST00000542293 RAB5BP61020 215 aa8.36□□□□□ -1.07
PAAF1-211ENST00000542293 C2orf88Q9BSF0 95 aa8.36□□□□□ -1.07
PAAF1-211ENST00000542293 CDKN2A-AS1Q9UH64 79 aa8.36□□□□□ -1.07
PAAF1-211ENST00000542293 ZNF706Q9Y5V0 76 aaPredicted RBP8.36□□□□□ -1.07
PAAF1-211ENST00000542293 TEX46H3BTG2 121 aa8.35□□□□□ -1.07
PAAF1-211ENST00000542293 VPREB1P12018 145 aa8.35□□□□□ -1.07
PAAF1-211ENST00000542293 AMELXQ99217 191 aa8.35□□□□□ -1.07
PAAF1-211ENST00000542293 C9orf92A6NGG3 77 aa8.34□□□□□ -1.07
PAAF1-211ENST00000542293 NPYP01303 97 aa8.34□□□□□ -1.07
PAAF1-211ENST00000542293 FAM19A3Q7Z5A8 133 aa8.34□□□□□ -1.07
PAAF1-211ENST00000542293 H3BS24 57 aa8.33□□□□□ -1.08
PAAF1-211ENST00000542293 KANTRA0A1W2PQU2 76 aa8.32□□□□□ -1.08
PAAF1-211ENST00000542293 MOBPQ13875 183 aa8.32□□□□□ -1.08
PAAF1-211ENST00000542293 C2orf66Q6UXQ4 117 aa8.32□□□□□ -1.08
PAAF1-211ENST00000542293 GEMIN7Q9H840 131 aaKnown RBP8.32□□□□□ -1.08
PAAF1-211ENST00000542293 D6R8Y8 96 aa8.31□□□□□ -1.08
PAAF1-211ENST00000542293 LINC00483Q53H64 154 aa8.3□□□□□ -1.08
PAAF1-211ENST00000542293 Q8NDZ9 215 aa8.3□□□□□ -1.08
PAAF1-211ENST00000542293 IGLV9-49A0A0B4J1Y8 123 aa8.29□□□□□ -1.08
PAAF1-211ENST00000542293 SMIM1B2RUZ4 78 aa8.29□□□□□ -1.08
PAAF1-211ENST00000542293 RAB5AP20339 215 aa8.29□□□□□ -1.08
PAAF1-211ENST00000542293 HERVK_113P63121 156 aa8.29□□□□□ -1.08
PAAF1-211ENST00000542293 SSBP3-AS1Q7Z2R9 100 aa8.29□□□□□ -1.08
PAAF1-211ENST00000542293 LINC01551Q86U37 167 aa8.29□□□□□ -1.08
PAAF1-211ENST00000542293 COX7B2Q8TF08 81 aa8.29□□□□□ -1.08
PAAF1-211ENST00000542293 VCX2Q9H322 139 aa8.29□□□□□ -1.08
PAAF1-211ENST00000542293 OSTCQ9NRP0 149 aa8.28□□□□□ -1.08
PAAF1-211ENST00000542293 TAGLN2P37802 199 aaKnown RBP8.27□□□□□ -1.09
PAAF1-211ENST00000542293 SMCR5Q8TEV8 140 aa8.27□□□□□ -1.09
PAAF1-211ENST00000542293 V9GYV3 84 aa8.27□□□□□ -1.09
PAAF1-211ENST00000542293 KRTAP6-3Q3LI67 103 aa8.26□□□□□ -1.09
PAAF1-211ENST00000542293 KRTAP4-8A0A0G2JLE6 195 aa8.25□□□□□ -1.09
PAAF1-211ENST00000542293 HMSDA8MTL9 139 aa8.25□□□□□ -1.09
PAAF1-211ENST00000542293 TMEM250H0YL14 139 aa8.25□□□□□ -1.09
PAAF1-211ENST00000542293 GAGE2AQ6NT46 116 aa8.25□□□□□ -1.09
PAAF1-211ENST00000542293 PFN2P35080 140 aa8.24□□□□□ -1.09
PAAF1-211ENST00000542293 RAB14P61106 215 aa8.24□□□□□ -1.09
PAAF1-211ENST00000542293 SEC11AP67812 179 aa8.24□□□□□ -1.09
PAAF1-211ENST00000542293 PDZD11Q5EBL8 140 aa8.24□□□□□ -1.09
PAAF1-211ENST00000542293 SND1-IT1Q9HBX3 110 aa8.24□□□□□ -1.09
PAAF1-211ENST00000542293 IGIPA6NJ69 53 aa8.23□□□□□ -1.09
PAAF1-211ENST00000542293 CEBPGP53567 150 aa8.23□□□□□ -1.09
PAAF1-211ENST00000542293 RPL24P83731 157 aaKnown RBP8.23□□□□□ -1.09
PAAF1-211ENST00000542293 AKAP14Q86UN6 197 aa8.23□□□□□ -1.09
PAAF1-211ENST00000542293 NAT8BQ9UHF3 227 aa8.23□□□□□ -1.09
PAAF1-211ENST00000542293 CYSLTR1Q9Y271 337 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms