RNA–Protein interactions for RNA: ENST00000541627.2

POLE-217, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 2,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-217	ENST00000541627	IGKV2D-28	P01615	120 aa		12.13	□□□□□ -0.47
POLE-217	ENST00000541627	HTN3	P15516	51 aa		12.13	□□□□□ -0.47
POLE-217	ENST00000541627	NTN5	Q8WTR8	489 aa	Predicted RBP	12.13	□□□□□ -0.47
POLE-217	ENST00000541627	LINC00158	P58513	81 aa		12.13	□□□□□ -0.47
POLE-217	ENST00000541627	SS18	Q15532	418 aa		12.13	□□□□□ -0.47
POLE-217	ENST00000541627	LINC00337	Q8N6G1	96 aa		12.13	□□□□□ -0.47
POLE-217	ENST00000541627	COPS9	Q8WXC6	57 aa		12.13	□□□□□ -0.47
POLE-217	ENST00000541627	KRTAP10-11	P60412	298 aa		12.12	□□□□□ -0.47
POLE-217	ENST00000541627	C2orf82	Q6UX34	121 aa		12.12	□□□□□ -0.47
POLE-217	ENST00000541627	SIGMAR1	Q99720	223 aa		12.12	□□□□□ -0.47
POLE-217	ENST00000541627	PPDPF	Q9H3Y8	114 aa		12.12	□□□□□ -0.47
POLE-217	ENST00000541627	TENM3	Q9P273	2699 aa		12.12	□□□□□ -0.47
POLE-217	ENST00000541627	TEX49	A0A1B0GTD5	131 aa		12.11	□□□□□ -0.47
POLE-217	ENST00000541627	SPART-AS1	P0CW21	52 aa		12.11	□□□□□ -0.47
POLE-217	ENST00000541627	PFN2	P35080	140 aa		12.11	□□□□□ -0.47
POLE-217	ENST00000541627	IGLV10-54	A0A075B6I4	117 aa		12.11	□□□□□ -0.47
POLE-217	ENST00000541627	CCL18	P55774	89 aa		12.11	□□□□□ -0.47
POLE-217	ENST00000541627	IBA57-AS1	B1ANH7	110 aa		12.1	□□□□□ -0.47
POLE-217	ENST00000541627	KRTAP24-1	Q3LI83	254 aa		12.1	□□□□□ -0.47
POLE-217	ENST00000541627	C6orf226	Q5I0X4	101 aa		12.1	□□□□□ -0.47
POLE-217	ENST00000541627	SND1-IT1	Q9HBX3	110 aa		12.1	□□□□□ -0.47
POLE-217	ENST00000541627	RETN	Q9HD89	108 aa		12.1	□□□□□ -0.47
POLE-217	ENST00000541627	MAST4	O15021	2626 aa		12.09	□□□□□ -0.47
POLE-217	ENST00000541627	COX7A2L	O14548	114 aa		12.09	□□□□□ -0.47
POLE-217	ENST00000541627	ANG	P03950	147 aa	Known RBP	12.09	□□□□□ -0.47
POLE-217	ENST00000541627	REG3A	Q06141	175 aa		12.08	□□□□□ -0.47
POLE-217	ENST00000541627	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	12.08	□□□□□ -0.47
POLE-217	ENST00000541627		Q8IZM0	81 aa		12.07	□□□□□ -0.48
POLE-217	ENST00000541627	FAM218A	Q96MZ4	157 aa		12.07	□□□□□ -0.48
POLE-217	ENST00000541627	KIAA0087	Q14695	138 aa		12.07	□□□□□ -0.48
POLE-217	ENST00000541627	MRPL23	Q16540	153 aa	Known RBP	12.06	□□□□□ -0.48
POLE-217	ENST00000541627	CD164L2	Q6UWJ8	174 aa		12.06	□□□□□ -0.48
POLE-217	ENST00000541627	DNAH3	Q8TD57	4116 aa		12.05	□□□□□ -0.48
POLE-217	ENST00000541627		H3BT86	120 aa		12.05	□□□□□ -0.48
POLE-217	ENST00000541627	XG	P55808	180 aa		12.05	□□□□□ -0.48
POLE-217	ENST00000541627	CRP	P02741	224 aa		12.04	□□□□□ -0.48
POLE-217	ENST00000541627	NOTCH1	P46531	2555 aa		12.04	□□□□□ -0.48
POLE-217	ENST00000541627	TRAV13-2	A0A0B4J235	113 aa		12.04	□□□□□ -0.48
POLE-217	ENST00000541627	MT-ATP8	P03928	68 aa		12.04	□□□□□ -0.48
POLE-217	ENST00000541627	LELP1	Q5T871	98 aa		12.03	□□□□□ -0.48
POLE-217	ENST00000541627	LINC01561	Q8N1V8	128 aa		12.03	□□□□□ -0.48
POLE-217	ENST00000541627	UBE2W	Q96B02	151 aa		12.03	□□□□□ -0.48
POLE-217	ENST00000541627	TRAV8-4	A0A0B4J246	113 aa		12.02	□□□□□ -0.48
POLE-217	ENST00000541627	RPL28	P46779	137 aa	Known RBP	12.02	□□□□□ -0.49
POLE-217	ENST00000541627	SMIM11B	Q8TCY0	68 aa		12.01	□□□□□ -0.49
POLE-217	ENST00000541627	C9orf116	Q5BN46	136 aa	Predicted RBP	12	□□□□□ -0.49
POLE-217	ENST00000541627	EGFEM1P	Q0D2K5	195 aa		11.99	□□□□□ -0.49
POLE-217	ENST00000541627	CKS1B	P61024	79 aa		11.99	□□□□□ -0.49
POLE-217	ENST00000541627	LYPD5	Q6UWN5	251 aa		11.99	□□□□□ -0.49
POLE-217	ENST00000541627	KLK12	Q9UKR0	248 aa		11.99	□□□□□ -0.49
POLE-217	ENST00000541627	C22orf24	Q9Y442	160 aa		11.99	□□□□□ -0.49
POLE-217	ENST00000541627	COL6A5	A8TX70	2615 aa		11.98	□□□□□ -0.49
POLE-217	ENST00000541627	MAL	P21145	153 aa		11.98	□□□□□ -0.49
POLE-217	ENST00000541627	ENHO	Q6UWT2	76 aa		11.98	□□□□□ -0.49
POLE-217	ENST00000541627	LINC00526	Q96FQ7	95 aa		11.98	□□□□□ -0.49
POLE-217	ENST00000541627	PRR34	Q9NV39	138 aa		11.98	□□□□□ -0.49
POLE-217	ENST00000541627	PRR3	P79522	188 aa	Known RBP	11.97	□□□□□ -0.49
POLE-217	ENST00000541627	TRAC	P01848	142 aa		11.96	□□□□□ -0.49
POLE-217	ENST00000541627		Q6ZTC4	211 aa		11.96	□□□□□ -0.49
POLE-217	ENST00000541627	C6orf223	Q8N319	242 aa		11.96	□□□□□ -0.49
POLE-217	ENST00000541627		Q9HAA7	133 aa		11.96	□□□□□ -0.5
POLE-217	ENST00000541627		A0A087WYN8	130 aa		11.95	□□□□□ -0.5
POLE-217	ENST00000541627	SCGB1A1	P11684	91 aa		11.95	□□□□□ -0.5
POLE-217	ENST00000541627	C10orf25	Q5T742	122 aa		11.95	□□□□□ -0.5
POLE-217	ENST00000541627		Q8NDZ9	215 aa		11.95	□□□□□ -0.5
POLE-217	ENST00000541627	DEFB121	Q5J5C9	76 aa		11.95	□□□□□ -0.5
POLE-217	ENST00000541627	CFAP161	Q6P656	301 aa		11.95	□□□□□ -0.5
POLE-217	ENST00000541627	C3orf56	Q8N813	242 aa		11.95	□□□□□ -0.5
POLE-217	ENST00000541627	KPRP	Q5T749	579 aa	Predicted RBP	11.94	□□□□□ -0.5
POLE-217	ENST00000541627	WFDC10B	Q8IUB3	73 aa		11.94	□□□□□ -0.5
POLE-217	ENST00000541627	NBEAL1	Q6ZS30	2694 aa		11.94	□□□□□ -0.5
POLE-217	ENST00000541627	OR13C6P	Q8NH95	151 aa		11.93	□□□□□ -0.5
POLE-217	ENST00000541627	BAALC-AS2	P0C853	105 aa		11.92	□□□□□ -0.5
POLE-217	ENST00000541627	CXCL5	P42830	114 aa		11.92	□□□□□ -0.5
POLE-217	ENST00000541627	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.92	□□□□□ -0.5
POLE-217	ENST00000541627	NANOS2	P60321	138 aa	Known RBP	11.92	□□□□□ -0.5
POLE-217	ENST00000541627	KLK5	Q9Y337	293 aa	Predicted RBP	11.92	□□□□□ -0.5
POLE-217	ENST00000541627	BAHCC1	Q9P281	2608 aa		11.91	□□□□□ -0.5
POLE-217	ENST00000541627	SPAG11B	Q08648	103 aa		11.9	□□□□□ -0.5
POLE-217	ENST00000541627	COX17	Q14061	63 aa		11.9	□□□□□ -0.5
POLE-217	ENST00000541627		A0A0J9YWU9	116 aa		11.9	□□□□□ -0.5
POLE-217	ENST00000541627	CYSRT1	A8MQ03	144 aa		11.9	□□□□□ -0.5
POLE-217	ENST00000541627		H3BNG1	76 aa		11.88	□□□□□ -0.51
POLE-217	ENST00000541627	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.87	□□□□□ -0.51
POLE-217	ENST00000541627	C9orf129	Q5T035	196 aa	Known RBP	11.87	□□□□□ -0.51
POLE-217	ENST00000541627	ESRG	Q1W209	222 aa		11.86	□□□□□ -0.51
POLE-217	ENST00000541627	LECT2	O14960	151 aa		11.86	□□□□□ -0.51
POLE-217	ENST00000541627	NDUFC2	O95298	119 aa		11.86	□□□□□ -0.51
POLE-217	ENST00000541627		H0YGX0	51 aa		11.85	□□□□□ -0.51
POLE-217	ENST00000541627	KRTAP26-1	Q6PEX3	210 aa		11.85	□□□□□ -0.51
POLE-217	ENST00000541627	PRB2	P02812	416 aa	Predicted RBP	11.84	□□□□□ -0.51
POLE-217	ENST00000541627	NCR3	O14931	201 aa		11.84	□□□□□ -0.51
POLE-217	ENST00000541627	FAM240A	A0A1B0GVK7	77 aa		11.83	□□□□□ -0.52
POLE-217	ENST00000541627	SLPI	P03973	132 aa		11.83	□□□□□ -0.52
POLE-217	ENST00000541627	C15orf53	Q8NAA6	179 aa		11.83	□□□□□ -0.52
POLE-217	ENST00000541627	C6orf48	Q9UBA6	75 aa		11.82	□□□□□ -0.52
POLE-217	ENST00000541627	TTC32	Q5I0X7	151 aa		11.81	□□□□□ -0.52
POLE-217	ENST00000541627	DNAL4	O96015	105 aa		11.81	□□□□□ -0.52
POLE-217	ENST00000541627	DEFB131B	A0A096LNP1	70 aa		11.8	□□□□□ -0.52
POLE-217	ENST00000541627	C11orf45	Q8TAV5	145 aa		11.8	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms