RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 COPS9Q8WXC6 57 aa11.96□□□□□ -0.49
SPIDR-227ENST00000541342 TRGV4A0A0C4DH28 118 aa11.96□□□□□ -0.49
SPIDR-227ENST00000541342 APOC4P55056 127 aa11.96□□□□□ -0.49
SPIDR-227ENST00000541342 DNAH3Q8TD57 4116 aa11.96□□□□□ -0.5
SPIDR-227ENST00000541342 PPDPFQ9H3Y8 114 aa11.96□□□□□ -0.5
SPIDR-227ENST00000541342 IGKV2-28A0A075B6P5 120 aa11.95□□□□□ -0.5
SPIDR-227ENST00000541342 IGKV2D-28P01615 120 aa11.95□□□□□ -0.5
SPIDR-227ENST00000541342 IGHV4-30-4P0DP06 118 aa11.95□□□□□ -0.5
SPIDR-227ENST00000541342 LINC00337Q8N6G1 96 aa11.95□□□□□ -0.5
SPIDR-227ENST00000541342 TMEM243Q9BU79 118 aa11.95□□□□□ -0.5
SPIDR-227ENST00000541342 C3orf56Q8N813 242 aa11.95□□□□□ -0.5
SPIDR-227ENST00000541342 KRTAP10-11P60412 298 aa11.94□□□□□ -0.5
SPIDR-227ENST00000541342 CHCHD5Q9BSY4 110 aa11.94□□□□□ -0.5
SPIDR-227ENST00000541342 BAALC-AS2P0C853 105 aa11.94□□□□□ -0.5
SPIDR-227ENST00000541342 DEFB4AO15263 64 aa11.93□□□□□ -0.5
SPIDR-227ENST00000541342 SDIM1Q6ZPB5 146 aa11.93□□□□□ -0.5
SPIDR-227ENST00000541342 UBE2L6O14933 153 aa11.93□□□□□ -0.5
SPIDR-227ENST00000541342 MAST4O15021 2626 aa11.93□□□□□ -0.5
SPIDR-227ENST00000541342 MIR7-3HGQ8N6C7 128 aa11.93□□□□□ -0.5
SPIDR-227ENST00000541342 IGLV4-60A0A075B6I1 120 aa11.92□□□□□ -0.5
SPIDR-227ENST00000541342 FAM222AQ5U5X8 452 aa11.92□□□□□ -0.5
SPIDR-227ENST00000541342 COX7B2Q8TF08 81 aa11.92□□□□□ -0.5
SPIDR-227ENST00000541342 Q9HAA7 133 aa11.92□□□□□ -0.5
SPIDR-227ENST00000541342 ACYP1P07311 99 aa11.91□□□□□ -0.5
SPIDR-227ENST00000541342 RPL28P46779 137 aaKnown RBP11.91□□□□□ -0.5
SPIDR-227ENST00000541342 IGHV4-28A0A0C4DH34 117 aa11.91□□□□□ -0.5
SPIDR-227ENST00000541342 Q8NAQ8 132 aa11.89□□□□□ -0.51
SPIDR-227ENST00000541342 IGHV3OR16-9A0A0B4J2B5 98 aa11.89□□□□□ -0.51
SPIDR-227ENST00000541342 IGKV3OR2-268A0A0C4DH90 116 aa11.89□□□□□ -0.51
SPIDR-227ENST00000541342 TRAV13-2A0A0B4J235 113 aa11.88□□□□□ -0.51
SPIDR-227ENST00000541342 SVIPQ8NHG7 77 aa11.88□□□□□ -0.51
SPIDR-227ENST00000541342 SND1-IT1Q9HBX3 110 aa11.88□□□□□ -0.51
SPIDR-227ENST00000541342 TOMM7Q9P0U1 55 aa11.88□□□□□ -0.51
SPIDR-227ENST00000541342 LYRM9A8MSI8 78 aa11.88□□□□□ -0.51
SPIDR-227ENST00000541342 C9orf129Q5T035 196 aaKnown RBP11.88□□□□□ -0.51
SPIDR-227ENST00000541342 A0A087WYN8 130 aa11.88□□□□□ -0.51
SPIDR-227ENST00000541342 CRPP02741 224 aa11.88□□□□□ -0.51
SPIDR-227ENST00000541342 FAM236AA0A1B0GUQ0 79 aa11.87□□□□□ -0.51
SPIDR-227ENST00000541342 FAM236BA0A1B0GV22 79 aa11.87□□□□□ -0.51
SPIDR-227ENST00000541342 EGFEM1PQ0D2K5 195 aa11.87□□□□□ -0.51
SPIDR-227ENST00000541342 SMIM11BQ8TCY0 68 aa11.87□□□□□ -0.51
SPIDR-227ENST00000541342 CELA1Q9UNI1 258 aa11.87□□□□□ -0.51
SPIDR-227ENST00000541342 CCL18P55774 89 aa11.86□□□□□ -0.51
SPIDR-227ENST00000541342 COL6A5A8TX70 2615 aa11.86□□□□□ -0.51
SPIDR-227ENST00000541342 IMUPQ9GZP8 106 aa11.86□□□□□ -0.51
SPIDR-227ENST00000541342 TRBV6-8A0A0A6YYG3 113 aa11.86□□□□□ -0.51
SPIDR-227ENST00000541342 MALP21145 153 aa11.86□□□□□ -0.51
SPIDR-227ENST00000541342 LINC00643Q86TS7 51 aa11.86□□□□□ -0.51
SPIDR-227ENST00000541342 MIFP14174 115 aa11.85□□□□□ -0.51
SPIDR-227ENST00000541342 GYPEP15421 78 aa11.84□□□□□ -0.51
SPIDR-227ENST00000541342 LINC00158P58513 81 aa11.84□□□□□ -0.51
SPIDR-227ENST00000541342 A0A087WZ39 114 aa11.83□□□□□ -0.52
SPIDR-227ENST00000541342 PRO0255Q9UI72 69 aa11.83□□□□□ -0.52
SPIDR-227ENST00000541342 C5orf38Q86SI9 138 aa11.82□□□□□ -0.52
SPIDR-227ENST00000541342 GAGE2AQ6NT46 116 aa11.81□□□□□ -0.52
SPIDR-227ENST00000541342 DAD1P61803 113 aa11.81□□□□□ -0.52
SPIDR-227ENST00000541342 IBA57-AS1B1ANH7 110 aa11.81□□□□□ -0.52
SPIDR-227ENST00000541342 INAFM2P0DMQ5 153 aa11.8□□□□□ -0.52
SPIDR-227ENST00000541342 PFN2P35080 140 aa11.8□□□□□ -0.52
SPIDR-227ENST00000541342 RETNQ9HD89 108 aa11.8□□□□□ -0.52
SPIDR-227ENST00000541342 ATP5G1P05496 136 aa11.8□□□□□ -0.52
SPIDR-227ENST00000541342 A0A096LPF7 62 aa11.79□□□□□ -0.52
SPIDR-227ENST00000541342 PAX4O43316 350 aa11.79□□□□□ -0.52
SPIDR-227ENST00000541342 LINC00959A0A1B0GUT2 108 aa11.78□□□□□ -0.52
SPIDR-227ENST00000541342 OBSCN-AS1Q96MR7 158 aa11.78□□□□□ -0.52
SPIDR-227ENST00000541342 SPART-AS1P0CW21 52 aa11.78□□□□□ -0.52
SPIDR-227ENST00000541342 C11orf68Q9H3H3 251 aaKnown RBP11.77□□□□□ -0.52
SPIDR-227ENST00000541342 C14orf132Q9NPU4 83 aa11.77□□□□□ -0.52
SPIDR-227ENST00000541342 DNAL4O96015 105 aa11.76□□□□□ -0.53
SPIDR-227ENST00000541342 LECT2O14960 151 aa11.75□□□□□ -0.53
SPIDR-227ENST00000541342 CXCL5P42830 114 aa11.75□□□□□ -0.53
SPIDR-227ENST00000541342 SMIM20Q8N5G0 67 aa11.75□□□□□ -0.53
SPIDR-227ENST00000541342 H0YGX0 51 aa11.75□□□□□ -0.53
SPIDR-227ENST00000541342 SS18Q15532 418 aa11.74□□□□□ -0.53
SPIDR-227ENST00000541342 NOTCH1P46531 2555 aa11.74□□□□□ -0.53
SPIDR-227ENST00000541342 SLPIP03973 132 aa11.74□□□□□ -0.53
SPIDR-227ENST00000541342 XCL1P47992 114 aa11.73□□□□□ -0.53
SPIDR-227ENST00000541342 TENM3Q9P273 2699 aa11.73□□□□□ -0.53
SPIDR-227ENST00000541342 HTN3P15516 51 aa11.73□□□□□ -0.53
SPIDR-227ENST00000541342 HIST1H4AP62805 103 aaKnown RBP11.73□□□□□ -0.53
SPIDR-227ENST00000541342 KLK5Q9Y337 293 aaPredicted RBP11.72□□□□□ -0.53
SPIDR-227ENST00000541342 NCR3O14931 201 aa11.72□□□□□ -0.53
SPIDR-227ENST00000541342 C6orf226Q5I0X4 101 aa11.71□□□□□ -0.53
SPIDR-227ENST00000541342 CLPSL2Q6UWE3 100 aa11.71□□□□□ -0.53
SPIDR-227ENST00000541342 OR13C6PQ8NH95 151 aa11.71□□□□□ -0.53
SPIDR-227ENST00000541342 LINC00846Q9NV44 126 aa11.71□□□□□ -0.53
SPIDR-227ENST00000541342 NBEAL1Q6ZS30 2694 aa11.71□□□□□ -0.53
SPIDR-227ENST00000541342 NANOS2P60321 138 aaKnown RBP11.71□□□□□ -0.54
SPIDR-227ENST00000541342 C3orf22Q8N5N4 141 aa11.71□□□□□ -0.54
SPIDR-227ENST00000541342 PRR3P79522 188 aaKnown RBP11.69□□□□□ -0.54
SPIDR-227ENST00000541342 Q8IZM0 81 aa11.69□□□□□ -0.54
SPIDR-227ENST00000541342 C2orf48Q96LS8 159 aa11.69□□□□□ -0.54
SPIDR-227ENST00000541342 A0A1B0GUV1 79 aa11.68□□□□□ -0.54
SPIDR-227ENST00000541342 PRB2P02812 416 aaPredicted RBP11.68□□□□□ -0.54
SPIDR-227ENST00000541342 UQCRQO14949 82 aa11.67□□□□□ -0.54
SPIDR-227ENST00000541342 TMEM126AQ9H061 195 aa11.67□□□□□ -0.54
SPIDR-227ENST00000541342 LINC00526Q96FQ7 95 aa11.66□□□□□ -0.54
SPIDR-227ENST00000541342 C9orf153Q5TBE3 101 aa11.66□□□□□ -0.54
SPIDR-227ENST00000541342 Q8N3U1 123 aa11.66□□□□□ -0.54
SPIDR-227ENST00000541342 HUWE1Q7Z6Z7 4374 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms