RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 ERASQ7Z444 233 aa5.58□□□□□ -1.52
TRAPPC1-202ENST00000540486 TIMM17AQ99595 171 aa5.58□□□□□ -1.52
TRAPPC1-202ENST00000540486 VCX2Q9H322 139 aa5.58□□□□□ -1.52
TRAPPC1-202ENST00000540486 TRGC2P03986 189 aa5.57□□□□□ -1.52
TRAPPC1-202ENST00000540486 FA2HQ7L5A8 372 aa5.57□□□□□ -1.52
TRAPPC1-202ENST00000540486 FAM19A3Q7Z5A8 133 aa5.57□□□□□ -1.52
TRAPPC1-202ENST00000540486 SCGB3A1Q96QR1 104 aa5.57□□□□□ -1.52
TRAPPC1-202ENST00000540486 IGLV4-69A0A075B6H9 119 aa5.56□□□□□ -1.52
TRAPPC1-202ENST00000540486 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.56□□□□□ -1.52
TRAPPC1-202ENST00000540486 SCO1O75880 301 aa5.56□□□□□ -1.52
TRAPPC1-202ENST00000540486 MALP21145 153 aa5.56□□□□□ -1.52
TRAPPC1-202ENST00000540486 KRTAP4-11Q9BYQ6 195 aa5.56□□□□□ -1.52
TRAPPC1-202ENST00000540486 IGHV3-64A0A075B6Q5 118 aa5.55□□□□□ -1.52
TRAPPC1-202ENST00000540486 A0A087WZ39 114 aa5.55□□□□□ -1.52
TRAPPC1-202ENST00000540486 ATP6V1G1O75348 118 aa5.55□□□□□ -1.52
TRAPPC1-202ENST00000540486 CIRBPQ14011 172 aaKnown RBP5.55□□□□□ -1.52
TRAPPC1-202ENST00000540486 PMCHL1Q16048 86 aa5.55□□□□□ -1.52
TRAPPC1-202ENST00000540486 Q6ZN92 141 aa5.55□□□□□ -1.52
TRAPPC1-202ENST00000540486 FSIP2Q5CZC0 6907 aa5.55□□□□□ -1.52
TRAPPC1-202ENST00000540486 LINC01549A6NIU2 74 aa5.54□□□□□ -1.52
TRAPPC1-202ENST00000540486 CHTF8P0CG12 524 aa5.54□□□□□ -1.52
TRAPPC1-202ENST00000540486 RAB5BP61020 215 aa5.54□□□□□ -1.52
TRAPPC1-202ENST00000540486 SYCNQ0VAF6 134 aa5.54□□□□□ -1.52
TRAPPC1-202ENST00000540486 KIAA0087Q14695 138 aa5.54□□□□□ -1.52
TRAPPC1-202ENST00000540486 PDZD11Q5EBL8 140 aa5.54□□□□□ -1.52
TRAPPC1-202ENST00000540486 PAPPA-AS1Q5QFB9 102 aa5.54□□□□□ -1.52
TRAPPC1-202ENST00000540486 C2orf48Q96LS8 159 aa5.54□□□□□ -1.52
TRAPPC1-202ENST00000540486 C2orf88Q9BSF0 95 aa5.54□□□□□ -1.52
TRAPPC1-202ENST00000540486 CST9LQ9H4G1 147 aa5.54□□□□□ -1.52
TRAPPC1-202ENST00000540486 APOMO95445 188 aa5.53□□□□□ -1.52
TRAPPC1-202ENST00000540486 LINC01561Q8N1V8 128 aa5.53□□□□□ -1.52
TRAPPC1-202ENST00000540486 OR10D4PQ8NGN7 298 aa5.53□□□□□ -1.52
TRAPPC1-202ENST00000540486 ORAOV1Q8WV07 137 aa5.53□□□□□ -1.52
TRAPPC1-202ENST00000540486 CDKN2A-AS1Q9UH64 79 aa5.53□□□□□ -1.52
TRAPPC1-202ENST00000540486 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC1-202ENST00000540486 NUPR1O60356 82 aa5.52□□□□□ -1.53
TRAPPC1-202ENST00000540486 HBDP02042 147 aa5.52□□□□□ -1.53
TRAPPC1-202ENST00000540486 SPAG11BQ08648 103 aa5.52□□□□□ -1.53
TRAPPC1-202ENST00000540486 PMVKQ15126 192 aa5.52□□□□□ -1.53
TRAPPC1-202ENST00000540486 C10orf25Q5T742 122 aa5.52□□□□□ -1.53
TRAPPC1-202ENST00000540486 REG3GQ6UW15 175 aa5.52□□□□□ -1.53
TRAPPC1-202ENST00000540486 UNQ6190/PRO20217Q6UXQ8 127 aa5.52□□□□□ -1.53
TRAPPC1-202ENST00000540486 CHCHD1Q96BP2 118 aaKnown RBP5.52□□□□□ -1.53
TRAPPC1-202ENST00000540486 CARD19Q96LW7 228 aa5.52□□□□□ -1.53
TRAPPC1-202ENST00000540486 CAMK2N2Q96S95 79 aa5.52□□□□□ -1.53
TRAPPC1-202ENST00000540486 KRTAP4-2Q9BYR5 136 aa5.52□□□□□ -1.53
TRAPPC1-202ENST00000540486 A0A087WYN8 130 aa5.51□□□□□ -1.53
TRAPPC1-202ENST00000540486 A0A096LNI7 61 aa5.51□□□□□ -1.53
TRAPPC1-202ENST00000540486 TINCRA0A1B0GVN0 87 aa5.51□□□□□ -1.53
TRAPPC1-202ENST00000540486 HERVK_113P63121 156 aa5.51□□□□□ -1.53
TRAPPC1-202ENST00000540486 SEC11AP67812 179 aa5.51□□□□□ -1.53
TRAPPC1-202ENST00000540486 FAM19A2Q8N3H0 131 aa5.51□□□□□ -1.53
TRAPPC1-202ENST00000540486 SPACA4Q8TDM5 124 aa5.51□□□□□ -1.53
TRAPPC1-202ENST00000540486 IGLV5-45A0A087WSX0 123 aa5.5□□□□□ -1.53
TRAPPC1-202ENST00000540486 IGKV2-24A0A0C4DH68 120 aa5.5□□□□□ -1.53
TRAPPC1-202ENST00000540486 F8WDY8 70 aa5.5□□□□□ -1.53
TRAPPC1-202ENST00000540486 C2orf82Q6UX34 121 aa5.5□□□□□ -1.53
TRAPPC1-202ENST00000540486 BAGE3Q86Y29 109 aa5.5□□□□□ -1.53
TRAPPC1-202ENST00000540486 DPH3Q96FX2 82 aa5.5□□□□□ -1.53
TRAPPC1-202ENST00000540486 GEMIN7Q9H840 131 aaKnown RBP5.5□□□□□ -1.53
TRAPPC1-202ENST00000540486 MRPL35Q9NZE8 188 aaKnown RBP5.5□□□□□ -1.53
TRAPPC1-202ENST00000540486 SERF1AO75920 110 aa5.49□□□□□ -1.53
TRAPPC1-202ENST00000540486 ATP5LO75964 103 aa5.49□□□□□ -1.53
TRAPPC1-202ENST00000540486 PTTG1IPP53801 180 aa5.49□□□□□ -1.53
TRAPPC1-202ENST00000540486 NDUFA6P56556 154 aa5.49□□□□□ -1.53
TRAPPC1-202ENST00000540486 MAJINQ3KP22 176 aa5.49□□□□□ -1.53
TRAPPC1-202ENST00000540486 PLAC8Q9NZF1 115 aa5.49□□□□□ -1.53
TRAPPC1-202ENST00000540486 C6orf48Q9UBA6 75 aa5.49□□□□□ -1.53
TRAPPC1-202ENST00000540486 LOC107984640A0A0U1RRK4 108 aa5.48□□□□□ -1.53
TRAPPC1-202ENST00000540486 SMIM1B2RUZ4 78 aa5.48□□□□□ -1.53
TRAPPC1-202ENST00000540486 NDUFA1O15239 70 aa5.48□□□□□ -1.53
TRAPPC1-202ENST00000540486 HSBP1O75506 76 aa5.48□□□□□ -1.53
TRAPPC1-202ENST00000540486 IGLC3P0DOY3 106 aa5.48□□□□□ -1.53
TRAPPC1-202ENST00000540486 GAGE2BQ13066 116 aa5.48□□□□□ -1.53
TRAPPC1-202ENST00000540486 SPINK6Q6UWN8 80 aa5.48□□□□□ -1.53
TRAPPC1-202ENST00000540486 Q8IZM0 81 aa5.48□□□□□ -1.53
TRAPPC1-202ENST00000540486 LINC00469Q8N7U9 141 aa5.48□□□□□ -1.53
TRAPPC1-202ENST00000540486 C7orf33Q8WU49 177 aa5.48□□□□□ -1.53
TRAPPC1-202ENST00000540486 TOMM7Q9P0U1 55 aa5.48□□□□□ -1.53
TRAPPC1-202ENST00000540486 A0A1W2PNN7 141 aa5.47□□□□□ -1.53
TRAPPC1-202ENST00000540486 HIST1H2BKO60814 126 aa5.47□□□□□ -1.53
TRAPPC1-202ENST00000540486 HIST1H2BJP06899 126 aa5.47□□□□□ -1.53
TRAPPC1-202ENST00000540486 SPINK8P0C7L1 97 aa5.47□□□□□ -1.53
TRAPPC1-202ENST00000540486 HIST1H2BOP23527 126 aa5.47□□□□□ -1.53
TRAPPC1-202ENST00000540486 HIST1H2BBP33778 126 aa5.47□□□□□ -1.53
TRAPPC1-202ENST00000540486 HIST1H2BDP58876 126 aa5.47□□□□□ -1.53
TRAPPC1-202ENST00000540486 HIST1H2BCP62807 126 aa5.47□□□□□ -1.53
TRAPPC1-202ENST00000540486 HIST2H2BEQ16778 126 aa5.47□□□□□ -1.53
TRAPPC1-202ENST00000540486 C9orf116Q5BN46 136 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC1-202ENST00000540486 C6orf226Q5I0X4 101 aa5.47□□□□□ -1.53
TRAPPC1-202ENST00000540486 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC1-202ENST00000540486 Q6ZRP5 223 aa5.47□□□□□ -1.53
TRAPPC1-202ENST00000540486 STPG4Q8N801 248 aa5.47□□□□□ -1.53
TRAPPC1-202ENST00000540486 HIST1H2BHQ93079 126 aa5.47□□□□□ -1.53
TRAPPC1-202ENST00000540486 IFI27L1Q96BM0 104 aa5.47□□□□□ -1.53
TRAPPC1-202ENST00000540486 PACRGQ96M98 296 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC1-202ENST00000540486 HIST1H2BNQ99877 126 aa5.47□□□□□ -1.53
TRAPPC1-202ENST00000540486 HIST1H2BMQ99879 126 aa5.47□□□□□ -1.53
TRAPPC1-202ENST00000540486 TRBV30A0A0K0K1B3 111 aa5.46□□□□□ -1.54
TRAPPC1-202ENST00000540486 C11orf86A6NJI1 115 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms