RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 LOC107984156A0A0G2JMH3 177 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 UBE2L5PA0A1B0GUS4 154 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 C17orf112F2Z3M2 114 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 K7EQD1 137 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 SSSCA1O60232 199 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 IGKV1-17P01599 117 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 CD28P10747 220 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 IGLL1P15814 213 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 CKS2P33552 79 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 RPL27AP46776 148 aaKnown RBP1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 UBE2AP49459 152 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 ATP5EP56381 51 aaPredicted RBP1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 LYZP61626 148 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 RBM3P98179 157 aaKnown RBP1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 FXYD3Q14802 87 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 LY6EQ16553 131 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 LINC00242Q5T6M2 205 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 SOSTDC1Q6X4U4 206 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 C7orf65Q6ZTY9 151 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 LYZL2Q7Z4W2 148 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 BAGE3Q86Y29 109 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 BAGE2Q86Y30 109 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 NDUFA11Q86Y39 141 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 GPHB5Q86YW7 130 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 ARL17AQ8IVW1 177 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 C15orf53Q8NAA6 179 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 TSKUQ8WUA8 353 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 C4orf3Q8WVX3 66 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 FAM103A1Q9BTL3 118 aaKnown RBP1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 NMES1Q9C002 83 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 DPH3P1Q9H4G8 78 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 OSTCQ9NRP0 149 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 TMEM242Q9NWH2 141 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 GNG13Q9P2W3 67 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 PKD1P98161 4303 aa1.26□□□□□ -2.21
CBX3P4-201ENST00000538909 IGHV1OR15-1A0A075B7D0 117 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 TRBV7-7A0A0K0K1E9 115 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 FAM223BA6NKX1 122 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 A8MTW9 85 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 PEX7O00628 323 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 ZNF324O75467 553 aaPredicted RBP1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 IGLV1-51P01701 117 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 CTSGP08311 255 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 PRB4P10163 310 aaPredicted RBP1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 HLA-DMBP28068 263 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 UBE2G1P62253 170 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 CCL20P78556 96 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 LINC01554Q52M75 96 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 LINC00322Q6ZN03 302 aaPredicted RBP1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 SPATA12Q7Z6I5 190 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 FAM223AQ8IWN6 122 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 CEND1Q8N111 149 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 CLEC2BQ92478 149 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 USMG5Q96IX5 58 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 CHAC1Q9BUX1 264 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 Q9H3A6 140 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 MANBALQ9NQG1 85 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 CYTL1Q9NRR1 136 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 ZNF492Q9P255 531 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 TRAPPC1Q9Y5R8 145 aa1.25□□□□□ -2.21
CBX3P4-201ENST00000538909 APOBP04114 4563 aaKnown RBP1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 TRBV7-1A0A0A6YYK4 115 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 PIGBOS1A0A0B4J2F0 54 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 IGHV3-38A0A0C4DH36 116 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 RPL37AP8A6NKH3 93 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 C9JCJ5 164 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 H3BRN7 92 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 H3BVH4 76 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 NDUFA4O00483 81 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 LEPROTO15243 131 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 NUPR1O60356 82 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 LTAP01374 205 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 PRH1P02810 166 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 HSPB1P04792 205 aaKnown RBP1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 ZNF56Q15929 161 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 DEFB136Q30KP8 78 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 CEMP1Q6PRD7 247 aaPredicted RBP1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 PATE2Q6UY27 113 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 Q6ZQT7 251 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 MIR17HGQ75NE6 70 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 PHF5AQ7RTV0 110 aaKnown RBP1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 C5orf38Q86SI9 138 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 SBSPONQ8IVN8 264 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 TMEM256Q8N2U0 113 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 SERP2Q8N6R1 65 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 CYB561D1Q8N8Q1 229 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 Q8NBF4 154 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 TYMSOSQ8TAI1 123 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 PPP1R1CQ8WVI7 109 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 C11orf52Q96A22 123 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 CHCHD1Q96BP2 118 aaKnown RBP1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 RMI2Q96E14 147 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 TRGV9Q99603 122 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 TTTY13Q9BZ97 58 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 SND1-IT1Q9HBX3 110 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 LINC00588Q9Y4M8 146 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 KIF25-AS1Q9Y6Z4 181 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 MUC4Q99102 2169 aa1.24□□□□□ -2.21
CBX3P4-201ENST00000538909 EPPK1P58107 5090 aaKnown RBP1.23□□□□□ -2.21
CBX3P4-201ENST00000538909 IGHV1-24A0A0C4DH33 117 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms