RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 IGKV2D-28P01615 120 aa17.21■□□□□ 0.35
RAB40C-204ENST00000538492 CRPP02741 224 aa17.2■□□□□ 0.34
RAB40C-204ENST00000538492 PPDPFQ9H3Y8 114 aa17.2■□□□□ 0.34
RAB40C-204ENST00000538492 IBA57-AS1B1ANH7 110 aa17.19■□□□□ 0.34
RAB40C-204ENST00000538492 CCL18P55774 89 aa17.19■□□□□ 0.34
RAB40C-204ENST00000538492 LINC00269Q8N2A0 174 aa17.19■□□□□ 0.34
RAB40C-204ENST00000538492 TRAV26-1A0A087WT03 109 aa17.18■□□□□ 0.34
RAB40C-204ENST00000538492 TRAV13-2A0A0B4J235 113 aa17.18■□□□□ 0.34
RAB40C-204ENST00000538492 Q8NAQ8 132 aa17.17■□□□□ 0.34
RAB40C-204ENST00000538492 TRAV8-4A0A0B4J246 113 aa17.17■□□□□ 0.34
RAB40C-204ENST00000538492 FAM218AQ96MZ4 157 aa17.17■□□□□ 0.34
RAB40C-204ENST00000538492 HTN3P15516 51 aa17.16■□□□□ 0.34
RAB40C-204ENST00000538492 IGLV10-54A0A075B6I4 117 aa17.15■□□□□ 0.34
RAB40C-204ENST00000538492 ANGP03950 147 aaKnown RBP17.14■□□□□ 0.33
RAB40C-204ENST00000538492 ATP5G1P05496 136 aa17.14■□□□□ 0.33
RAB40C-204ENST00000538492 IGHV4-30-4P0DP06 118 aa17.12■□□□□ 0.33
RAB40C-204ENST00000538492 MIFP14174 115 aa17.12■□□□□ 0.33
RAB40C-204ENST00000538492 RPL28P46779 137 aaKnown RBP17.12■□□□□ 0.33
RAB40C-204ENST00000538492 Q8IZM0 81 aa17.11■□□□□ 0.33
RAB40C-204ENST00000538492 SMIM11BQ8TCY0 68 aa17.1■□□□□ 0.33
RAB40C-204ENST00000538492 CHCHD10Q8WYQ3 142 aaPredicted RBP17.1■□□□□ 0.33
RAB40C-204ENST00000538492 TRACP01848 142 aa17.09■□□□□ 0.33
RAB40C-204ENST00000538492 REG3AQ06141 175 aa17.09■□□□□ 0.33
RAB40C-204ENST00000538492 SPART-AS1P0CW21 52 aa17.08■□□□□ 0.33
RAB40C-204ENST00000538492 WFDC9Q8NEX5 89 aa17.08■□□□□ 0.33
RAB40C-204ENST00000538492 CD164L2Q6UWJ8 174 aa17.08■□□□□ 0.32
RAB40C-204ENST00000538492 CKS1BP61024 79 aa17.07■□□□□ 0.32
RAB40C-204ENST00000538492 Q9HAA7 133 aa17.07■□□□□ 0.32
RAB40C-204ENST00000538492 BAALC-AS2P0C853 105 aa17.06■□□□□ 0.32
RAB40C-204ENST00000538492 OR13C6PQ8NH95 151 aa17.06■□□□□ 0.32
RAB40C-204ENST00000538492 DEFB121Q5J5C9 76 aa17.05■□□□□ 0.32
RAB40C-204ENST00000538492 SNCGO76070 127 aa17.04■□□□□ 0.32
RAB40C-204ENST00000538492 MALP21145 153 aa17.04■□□□□ 0.32
RAB40C-204ENST00000538492 MRPL23Q16540 153 aaKnown RBP17.04■□□□□ 0.32
RAB40C-204ENST00000538492 KIAA0087Q14695 138 aa17.03■□□□□ 0.32
RAB40C-204ENST00000538492 CFAP161Q6P656 301 aa17.02■□□□□ 0.31
RAB40C-204ENST00000538492 LINC01561Q8N1V8 128 aa17.02■□□□□ 0.31
RAB40C-204ENST00000538492 A0A087WYN8 130 aa17.01■□□□□ 0.31
RAB40C-204ENST00000538492 A0A1B0GV72 72 aa17.01■□□□□ 0.31
RAB40C-204ENST00000538492 C15orf53Q8NAA6 179 aa17.01■□□□□ 0.31
RAB40C-204ENST00000538492 C22orf24Q9Y442 160 aa17■□□□□ 0.31
RAB40C-204ENST00000538492 WIPF1O43516 503 aa16.99■□□□□ 0.31
RAB40C-204ENST00000538492 OXLD1Q5BKU9 147 aa16.99■□□□□ 0.31
RAB40C-204ENST00000538492 C9orf116Q5BN46 136 aaPredicted RBP16.99■□□□□ 0.31
RAB40C-204ENST00000538492 PRR3P79522 188 aaKnown RBP16.98■□□□□ 0.31
RAB40C-204ENST00000538492 TTC32Q5I0X7 151 aa16.98■□□□□ 0.31
RAB40C-204ENST00000538492 LELP1Q5T871 98 aa16.98■□□□□ 0.31
RAB40C-204ENST00000538492 F8P00451 2351 aa16.97■□□□□ 0.31
RAB40C-204ENST00000538492 FAM240AA0A1B0GVK7 77 aa16.96■□□□□ 0.31
RAB40C-204ENST00000538492 DNAL4O96015 105 aa16.95■□□□□ 0.3
RAB40C-204ENST00000538492 KLK12Q9UKR0 248 aa16.95■□□□□ 0.3
RAB40C-204ENST00000538492 GAGE2BQ13066 116 aa16.95■□□□□ 0.3
RAB40C-204ENST00000538492 GAGE2EQ4V326 116 aa16.95■□□□□ 0.3
RAB40C-204ENST00000538492 RETNQ9HD89 108 aa16.95■□□□□ 0.3
RAB40C-204ENST00000538492 GAGE2DQ9UEU5 116 aa16.95■□□□□ 0.3
RAB40C-204ENST00000538492 H0YGX0 51 aa16.93■□□□□ 0.3
RAB40C-204ENST00000538492 CXCL5P42830 114 aa16.93■□□□□ 0.3
RAB40C-204ENST00000538492 LINC00526Q96FQ7 95 aa16.93■□□□□ 0.3
RAB40C-204ENST00000538492 C6orf223Q8N319 242 aa16.92■□□□□ 0.3
RAB40C-204ENST00000538492 LECT2O14960 151 aa16.92■□□□□ 0.3
RAB40C-204ENST00000538492 ANK2Q01484 3957 aa16.92■□□□□ 0.3
RAB40C-204ENST00000538492 KRTAP10-11P60412 298 aa16.91■□□□□ 0.3
RAB40C-204ENST00000538492 COX17Q14061 63 aa16.91■□□□□ 0.3
RAB40C-204ENST00000538492 PKD1L1Q8TDX9 2849 aa16.91■□□□□ 0.3
RAB40C-204ENST00000538492 C10orf25Q5T742 122 aa16.89■□□□□ 0.3
RAB40C-204ENST00000538492 LYPD5Q6UWN5 251 aa16.89■□□□□ 0.29
RAB40C-204ENST00000538492 SPAG11BQ08648 103 aa16.88■□□□□ 0.29
RAB40C-204ENST00000538492 UNQ6190/PRO20217Q6UXQ8 127 aa16.88■□□□□ 0.29
RAB40C-204ENST00000538492 ENHOQ6UWT2 76 aa16.87■□□□□ 0.29
RAB40C-204ENST00000538492 SLPIP03973 132 aa16.87■□□□□ 0.29
RAB40C-204ENST00000538492 PRR34Q9NV39 138 aa16.87■□□□□ 0.29
RAB40C-204ENST00000538492 C9orf129Q5T035 196 aaKnown RBP16.86■□□□□ 0.29
RAB40C-204ENST00000538492 NANOS2P60321 138 aaKnown RBP16.86■□□□□ 0.29
RAB40C-204ENST00000538492 Q8NDZ9 215 aa16.85■□□□□ 0.29
RAB40C-204ENST00000538492 KLK5Q9Y337 293 aaPredicted RBP16.85■□□□□ 0.29
RAB40C-204ENST00000538492 FLNBO75369 2602 aaKnown RBP16.85■□□□□ 0.29
RAB40C-204ENST00000538492 ANAPC13Q9BS18 74 aa16.85■□□□□ 0.29
RAB40C-204ENST00000538492 STAB1Q9NY15 2570 aa16.85■□□□□ 0.29
RAB40C-204ENST00000538492 NCR3O14931 201 aa16.84■□□□□ 0.29
RAB40C-204ENST00000538492 ACYP1P07311 99 aa16.84■□□□□ 0.29
RAB40C-204ENST00000538492 FBN1P35555 2871 aaKnown RBP16.83■□□□□ 0.28
RAB40C-204ENST00000538492 CYSRT1A8MQ03 144 aa16.83■□□□□ 0.28
RAB40C-204ENST00000538492 NDUFC2O95298 119 aa16.83■□□□□ 0.28
RAB40C-204ENST00000538492 INAFM2P0DMQ5 153 aa16.83■□□□□ 0.28
RAB40C-204ENST00000538492 GAGE2AQ6NT46 116 aa16.82■□□□□ 0.28
RAB40C-204ENST00000538492 SMCR5Q8TEV8 140 aa16.82■□□□□ 0.28
RAB40C-204ENST00000538492 KPRPQ5T749 579 aaPredicted RBP16.81■□□□□ 0.28
RAB40C-204ENST00000538492 Q6Q795 121 aa16.81■□□□□ 0.28
RAB40C-204ENST00000538492 Q6ZTC4 211 aa16.81■□□□□ 0.28
RAB40C-204ENST00000538492 WFDC10BQ8IUB3 73 aa16.81■□□□□ 0.28
RAB40C-204ENST00000538492 TMEM126AQ9H061 195 aa16.8■□□□□ 0.28
RAB40C-204ENST00000538492 TENM3Q9P273 2699 aa16.8■□□□□ 0.28
RAB40C-204ENST00000538492 NDUFV3P56181 108 aaKnown RBP16.8■□□□□ 0.28
RAB40C-204ENST00000538492 KRTAP24-1Q3LI83 254 aa16.8■□□□□ 0.28
RAB40C-204ENST00000538492 C14orf132Q9NPU4 83 aa16.79■□□□□ 0.28
RAB40C-204ENST00000538492 CMYA5Q8N3K9 4069 aa16.77■□□□□ 0.28
RAB40C-204ENST00000538492 NHLRC4P0CG21 123 aaPredicted RBP16.76■□□□□ 0.27
RAB40C-204ENST00000538492 S100A7L2Q5SY68 101 aa16.75■□□□□ 0.27
RAB40C-204ENST00000538492 ORMDL1Q9P0S3 153 aa16.75■□□□□ 0.27
RAB40C-204ENST00000538492 A0A0J9YWU9 116 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms