RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 LINC00269Q8N2A0 174 aa9.63□□□□□ -0.87
LIMK1-208ENST00000538333 LINC00158P58513 81 aa9.61□□□□□ -0.87
LIMK1-208ENST00000538333 MRPL23Q16540 153 aaKnown RBP9.61□□□□□ -0.87
LIMK1-208ENST00000538333 OXLD1Q5BKU9 147 aa9.61□□□□□ -0.87
LIMK1-208ENST00000538333 Q8IZM0 81 aa9.61□□□□□ -0.87
LIMK1-208ENST00000538333 SIGMAR1Q99720 223 aa9.61□□□□□ -0.87
LIMK1-208ENST00000538333 CDIP1Q9H305 208 aa9.61□□□□□ -0.87
LIMK1-208ENST00000538333 IGKV2-28A0A075B6P5 120 aa9.61□□□□□ -0.87
LIMK1-208ENST00000538333 COX7A2LO14548 114 aa9.61□□□□□ -0.87
LIMK1-208ENST00000538333 IGKV2D-28P01615 120 aa9.61□□□□□ -0.87
LIMK1-208ENST00000538333 H3BT86 120 aa9.6□□□□□ -0.87
LIMK1-208ENST00000538333 CCL18P55774 89 aa9.6□□□□□ -0.87
LIMK1-208ENST00000538333 KRTAP10-11P60412 298 aa9.6□□□□□ -0.87
LIMK1-208ENST00000538333 C6orf226Q5I0X4 101 aa9.6□□□□□ -0.87
LIMK1-208ENST00000538333 CD164L2Q6UWJ8 174 aa9.6□□□□□ -0.87
LIMK1-208ENST00000538333 NTN5Q8WTR8 489 aaPredicted RBP9.6□□□□□ -0.87
LIMK1-208ENST00000538333 SND1-IT1Q9HBX3 110 aa9.6□□□□□ -0.87
LIMK1-208ENST00000538333 HTN3P15516 51 aa9.6□□□□□ -0.87
LIMK1-208ENST00000538333 REG3AQ06141 175 aa9.6□□□□□ -0.87
LIMK1-208ENST00000538333 KRTAP24-1Q3LI83 254 aa9.6□□□□□ -0.87
LIMK1-208ENST00000538333 LINC00337Q8N6G1 96 aa9.6□□□□□ -0.87
LIMK1-208ENST00000538333 FBN1P35555 2871 aaKnown RBP9.6□□□□□ -0.87
LIMK1-208ENST00000538333 ANGP03950 147 aaKnown RBP9.59□□□□□ -0.87
LIMK1-208ENST00000538333 CHCHD10Q8WYQ3 142 aaPredicted RBP9.59□□□□□ -0.87
LIMK1-208ENST00000538333 TRAV13-2A0A0B4J235 113 aa9.58□□□□□ -0.88
LIMK1-208ENST00000538333 PFN2P35080 140 aa9.58□□□□□ -0.88
LIMK1-208ENST00000538333 LELP1Q5T871 98 aa9.58□□□□□ -0.88
LIMK1-208ENST00000538333 C2orf82Q6UX34 121 aa9.58□□□□□ -0.88
LIMK1-208ENST00000538333 C11orf68Q9H3H3 251 aaKnown RBP9.58□□□□□ -0.88
LIMK1-208ENST00000538333 CMYA5Q8N3K9 4069 aa9.58□□□□□ -0.88
LIMK1-208ENST00000538333 KIAA0087Q14695 138 aa9.58□□□□□ -0.88
LIMK1-208ENST00000538333 TEX49A0A1B0GTD5 131 aa9.57□□□□□ -0.88
LIMK1-208ENST00000538333 CRPP02741 224 aa9.57□□□□□ -0.88
LIMK1-208ENST00000538333 EGFEM1PQ0D2K5 195 aa9.57□□□□□ -0.88
LIMK1-208ENST00000538333 IGLV10-54A0A075B6I4 117 aa9.56□□□□□ -0.88
LIMK1-208ENST00000538333 RPL28P46779 137 aaKnown RBP9.56□□□□□ -0.88
LIMK1-208ENST00000538333 ANK2Q01484 3957 aa9.55□□□□□ -0.88
LIMK1-208ENST00000538333 UBE2WQ96B02 151 aa9.55□□□□□ -0.88
LIMK1-208ENST00000538333 RETNQ9HD89 108 aa9.55□□□□□ -0.88
LIMK1-208ENST00000538333 FAM218AQ96MZ4 157 aa9.54□□□□□ -0.88
LIMK1-208ENST00000538333 PRR34Q9NV39 138 aa9.54□□□□□ -0.88
LIMK1-208ENST00000538333 TRACP01848 142 aa9.53□□□□□ -0.88
LIMK1-208ENST00000538333 SCGB1A1P11684 91 aa9.53□□□□□ -0.88
LIMK1-208ENST00000538333 CXCL5P42830 114 aa9.53□□□□□ -0.88
LIMK1-208ENST00000538333 CKS1BP61024 79 aa9.53□□□□□ -0.88
LIMK1-208ENST00000538333 LYPD5Q6UWN5 251 aa9.53□□□□□ -0.88
LIMK1-208ENST00000538333 XGP55808 180 aa9.52□□□□□ -0.89
LIMK1-208ENST00000538333 SMIM11BQ8TCY0 68 aa9.52□□□□□ -0.89
LIMK1-208ENST00000538333 MALP21145 153 aa9.51□□□□□ -0.89
LIMK1-208ENST00000538333 H3BNG1 76 aa9.51□□□□□ -0.89
LIMK1-208ENST00000538333 DEFB121Q5J5C9 76 aa9.51□□□□□ -0.89
LIMK1-208ENST00000538333 C3orf56Q8N813 242 aa9.51□□□□□ -0.89
LIMK1-208ENST00000538333 COL6A5A8TX70 2615 aa9.51□□□□□ -0.89
LIMK1-208ENST00000538333 TRAV8-4A0A0B4J246 113 aa9.5□□□□□ -0.89
LIMK1-208ENST00000538333 COX17Q14061 63 aa9.5□□□□□ -0.89
LIMK1-208ENST00000538333 KLK12Q9UKR0 248 aa9.5□□□□□ -0.89
LIMK1-208ENST00000538333 DNAH3Q8TD57 4116 aa9.5□□□□□ -0.89
LIMK1-208ENST00000538333 MT-ATP8P03928 68 aa9.5□□□□□ -0.89
LIMK1-208ENST00000538333 ENHOQ6UWT2 76 aa9.5□□□□□ -0.89
LIMK1-208ENST00000538333 KLK5Q9Y337 293 aaPredicted RBP9.5□□□□□ -0.89
LIMK1-208ENST00000538333 KPRPQ5T749 579 aaPredicted RBP9.48□□□□□ -0.89
LIMK1-208ENST00000538333 Q6ZTC4 211 aa9.48□□□□□ -0.89
LIMK1-208ENST00000538333 C22orf24Q9Y442 160 aa9.48□□□□□ -0.89
LIMK1-208ENST00000538333 STAB1Q9NY15 2570 aa9.47□□□□□ -0.89
LIMK1-208ENST00000538333 C9orf116Q5BN46 136 aaPredicted RBP9.47□□□□□ -0.89
LIMK1-208ENST00000538333 PKD1L1Q8TDX9 2849 aa9.47□□□□□ -0.89
LIMK1-208ENST00000538333 NDUFC2O95298 119 aa9.46□□□□□ -0.89
LIMK1-208ENST00000538333 BAALC-AS2P0C853 105 aa9.46□□□□□ -0.9
LIMK1-208ENST00000538333 SPAG11BQ08648 103 aa9.46□□□□□ -0.9
LIMK1-208ENST00000538333 C6orf223Q8N319 242 aa9.46□□□□□ -0.9
LIMK1-208ENST00000538333 A0A087WYN8 130 aa9.45□□□□□ -0.9
LIMK1-208ENST00000538333 H0YGX0 51 aa9.45□□□□□ -0.9
LIMK1-208ENST00000538333 C10orf25Q5T742 122 aa9.45□□□□□ -0.9
LIMK1-208ENST00000538333 WFDC10BQ8IUB3 73 aa9.45□□□□□ -0.9
LIMK1-208ENST00000538333 OR13C6PQ8NH95 151 aa9.45□□□□□ -0.9
LIMK1-208ENST00000538333 UNQ6190/PRO20217Q6UXQ8 127 aa9.44□□□□□ -0.9
LIMK1-208ENST00000538333 A0A0J9YWU9 116 aa9.44□□□□□ -0.9
LIMK1-208ENST00000538333 FAM240AA0A1B0GVK7 77 aa9.44□□□□□ -0.9
LIMK1-208ENST00000538333 NANOS2P60321 138 aaKnown RBP9.44□□□□□ -0.9
LIMK1-208ENST00000538333 PRR3P79522 188 aaKnown RBP9.44□□□□□ -0.9
LIMK1-208ENST00000538333 Q9HAA7 133 aa9.44□□□□□ -0.9
LIMK1-208ENST00000538333 LINC00526Q96FQ7 95 aa9.43□□□□□ -0.9
LIMK1-208ENST00000538333 TENM3Q9P273 2699 aa9.43□□□□□ -0.9
LIMK1-208ENST00000538333 Q8NDZ9 215 aa9.43□□□□□ -0.9
LIMK1-208ENST00000538333 MUC7Q8TAX7 377 aa9.41□□□□□ -0.9
LIMK1-208ENST00000538333 ESRGQ1W209 222 aa9.41□□□□□ -0.9
LIMK1-208ENST00000538333 KRTAP26-1Q6PEX3 210 aa9.41□□□□□ -0.9
LIMK1-208ENST00000538333 GVQW2A0A096LPI5 108 aaPredicted RBP9.4□□□□□ -0.9
LIMK1-208ENST00000538333 LECT2O14960 151 aa9.39□□□□□ -0.91
LIMK1-208ENST00000538333 DNAL4O96015 105 aa9.39□□□□□ -0.91
LIMK1-208ENST00000538333 TMEM126AQ9H061 195 aa9.39□□□□□ -0.91
LIMK1-208ENST00000538333 DEFB131BA0A096LNP1 70 aa9.39□□□□□ -0.91
LIMK1-208ENST00000538333 C11orf45Q8TAV5 145 aa9.39□□□□□ -0.91
LIMK1-208ENST00000538333 C6orf48Q9UBA6 75 aa9.37□□□□□ -0.91
LIMK1-208ENST00000538333 C15orf53Q8NAA6 179 aa9.37□□□□□ -0.91
LIMK1-208ENST00000538333 MDFIQ99750 246 aa9.37□□□□□ -0.91
LIMK1-208ENST00000538333 DNHD1Q96M86 4753 aa9.36□□□□□ -0.91
LIMK1-208ENST00000538333 NCR3O14931 201 aa9.36□□□□□ -0.91
LIMK1-208ENST00000538333 SNCGO76070 127 aa9.36□□□□□ -0.91
LIMK1-208ENST00000538333 ACYP1P07311 99 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms