RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 PRO0628Q9UI54 55 aa4.74□□□□□ -1.65
CPSF7-215ENST00000536145 PIEZO2Q9H5I5 2752 aa4.74□□□□□ -1.65
CPSF7-215ENST00000536145 IGKV3OR2-268A0A0C4DH90 116 aa4.73□□□□□ -1.65
CPSF7-215ENST00000536145 A0A1B0GUV1 79 aa4.73□□□□□ -1.65
CPSF7-215ENST00000536145 C6orf226Q5I0X4 101 aa4.73□□□□□ -1.65
CPSF7-215ENST00000536145 RMI2Q96E14 147 aa4.73□□□□□ -1.65
CPSF7-215ENST00000536145 C19orf73Q9NVV2 129 aa4.73□□□□□ -1.65
CPSF7-215ENST00000536145 ATRXP46100 2492 aa4.73□□□□□ -1.65
CPSF7-215ENST00000536145 TRBV7-4A0A0J9YYF1 115 aa4.72□□□□□ -1.65
CPSF7-215ENST00000536145 H3BQ85 93 aa4.72□□□□□ -1.65
CPSF7-215ENST00000536145 IGHV4-31P0DP07 118 aa4.72□□□□□ -1.65
CPSF7-215ENST00000536145 PDE6GP18545 87 aa4.72□□□□□ -1.65
CPSF7-215ENST00000536145 CMC4P56277 68 aaPredicted RBP4.72□□□□□ -1.65
CPSF7-215ENST00000536145 ATP5EP56381 51 aaPredicted RBP4.72□□□□□ -1.65
CPSF7-215ENST00000536145 RBM3P98179 157 aaKnown RBP4.72□□□□□ -1.65
CPSF7-215ENST00000536145 C6orf99Q4VX62 202 aa4.72□□□□□ -1.65
CPSF7-215ENST00000536145 SPATA3Q8NHX4 192 aa4.72□□□□□ -1.65
CPSF7-215ENST00000536145 ATMQ13315 3056 aa4.72□□□□□ -1.65
CPSF7-215ENST00000536145 SPTA1P02549 2419 aa4.71□□□□□ -1.66
CPSF7-215ENST00000536145 TRGV4A0A0C4DH28 118 aa4.71□□□□□ -1.66
CPSF7-215ENST00000536145 TRBV7-6A0A0J9YX20 115 aa4.71□□□□□ -1.66
CPSF7-215ENST00000536145 NDUFC1O43677 76 aa4.71□□□□□ -1.66
CPSF7-215ENST00000536145 ERC2-IT1O76042 136 aa4.71□□□□□ -1.66
CPSF7-215ENST00000536145 MUC7Q8TAX7 377 aa4.71□□□□□ -1.66
CPSF7-215ENST00000536145 RP1L1Q8IWN7 2480 aaPredicted RBP4.71□□□□□ -1.66
CPSF7-215ENST00000536145 SPTBN1Q01082 2364 aaKnown RBP4.71□□□□□ -1.66
CPSF7-215ENST00000536145 USP24Q9UPU5 2620 aa4.71□□□□□ -1.66
CPSF7-215ENST00000536145 TLN1Q9Y490 2541 aaKnown RBP4.71□□□□□ -1.66
CPSF7-215ENST00000536145 TRGV2A0A075B6R0 118 aa4.7□□□□□ -1.66
CPSF7-215ENST00000536145 F8WEM9 126 aa4.7□□□□□ -1.66
CPSF7-215ENST00000536145 IGLV6-57P01721 117 aa4.7□□□□□ -1.66
CPSF7-215ENST00000536145 C11orf68Q9H3H3 251 aaKnown RBP4.7□□□□□ -1.66
CPSF7-215ENST00000536145 ESM1Q9NQ30 184 aa4.7□□□□□ -1.66
CPSF7-215ENST00000536145 BOD1L1Q8NFC6 3051 aa4.69□□□□□ -1.66
CPSF7-215ENST00000536145 CD164L2Q6UWJ8 174 aa4.69□□□□□ -1.66
CPSF7-215ENST00000536145 SNURFQ9Y675 71 aa4.69□□□□□ -1.66
CPSF7-215ENST00000536145 RELNP78509 3460 aa4.69□□□□□ -1.66
CPSF7-215ENST00000536145 SMG1Q96Q15 3661 aaKnown RBP4.69□□□□□ -1.66
CPSF7-215ENST00000536145 NBASA2RRP1 2371 aa4.68□□□□□ -1.66
CPSF7-215ENST00000536145 A0A0U1RQV1 116 aa4.68□□□□□ -1.66
CPSF7-215ENST00000536145 TM2D3Q9BRN9 247 aa4.68□□□□□ -1.66
CPSF7-215ENST00000536145 LINC00474Q9P2X8 69 aa4.68□□□□□ -1.66
CPSF7-215ENST00000536145 A0A0J9YWU9 116 aa4.67□□□□□ -1.66
CPSF7-215ENST00000536145 IGHV4-30-4P0DP06 118 aa4.67□□□□□ -1.66
CPSF7-215ENST00000536145 HAMPP81172 84 aa4.67□□□□□ -1.66
CPSF7-215ENST00000536145 NREPQ16612 68 aa4.67□□□□□ -1.66
CPSF7-215ENST00000536145 C9orf116Q5BN46 136 aaPredicted RBP4.67□□□□□ -1.66
CPSF7-215ENST00000536145 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.67□□□□□ -1.66
CPSF7-215ENST00000536145 Q8N3U1 123 aa4.67□□□□□ -1.66
CPSF7-215ENST00000536145 HRNRQ86YZ3 2850 aaPredicted RBP4.67□□□□□ -1.66
CPSF7-215ENST00000536145 EPG5Q9HCE0 2579 aa4.67□□□□□ -1.66
CPSF7-215ENST00000536145 KALRNO60229 2985 aa4.67□□□□□ -1.66
CPSF7-215ENST00000536145 SORL1Q92673 2214 aa4.66□□□□□ -1.66
CPSF7-215ENST00000536145 GVQW2A0A096LPI5 108 aaPredicted RBP4.66□□□□□ -1.66
CPSF7-215ENST00000536145 CCL24O00175 119 aa4.66□□□□□ -1.66
CPSF7-215ENST00000536145 MIFP14174 115 aa4.66□□□□□ -1.66
CPSF7-215ENST00000536145 GYPEP15421 78 aa4.66□□□□□ -1.66
CPSF7-215ENST00000536145 C10orf25Q5T742 122 aa4.66□□□□□ -1.66
CPSF7-215ENST00000536145 Q6ZQY7 126 aa4.66□□□□□ -1.66
CPSF7-215ENST00000536145 LINC01006Q8NI28 216 aa4.66□□□□□ -1.66
CPSF7-215ENST00000536145 CHCHD10Q8WYQ3 142 aaPredicted RBP4.66□□□□□ -1.66
CPSF7-215ENST00000536145 OCR1Q9BZK8 76 aa4.66□□□□□ -1.66
CPSF7-215ENST00000536145 WFDC10AQ9H1F0 79 aa4.66□□□□□ -1.66
CPSF7-215ENST00000536145 LAMTOR3Q9UHA4 124 aa4.66□□□□□ -1.66
CPSF7-215ENST00000536145 CELA1Q9UNI1 258 aa4.66□□□□□ -1.66
CPSF7-215ENST00000536145 CR1P17927 2039 aa4.66□□□□□ -1.66
CPSF7-215ENST00000536145 F8WDY8 70 aa4.65□□□□□ -1.67
CPSF7-215ENST00000536145 IGLV1-51P01701 117 aa4.65□□□□□ -1.67
CPSF7-215ENST00000536145 IGKV4-1P06312 121 aa4.65□□□□□ -1.67
CPSF7-215ENST00000536145 RPL35AP18077 110 aaKnown RBP4.65□□□□□ -1.67
CPSF7-215ENST00000536145 KRTAP10-9P60411 292 aa4.65□□□□□ -1.67
CPSF7-215ENST00000536145 FAM229BQ4G0N7 80 aa4.65□□□□□ -1.67
CPSF7-215ENST00000536145 Q6ZTC4 211 aa4.65□□□□□ -1.67
CPSF7-215ENST00000536145 LCE6AA0A183 80 aa4.64□□□□□ -1.67
CPSF7-215ENST00000536145 RNASE1P07998 156 aaKnown RBP4.64□□□□□ -1.67
CPSF7-215ENST00000536145 KHDC1LQ5JSQ8 128 aa4.64□□□□□ -1.67
CPSF7-215ENST00000536145 CLPSL2Q6UWE3 100 aa4.64□□□□□ -1.67
CPSF7-215ENST00000536145 UNQ6190/PRO20217Q6UXQ8 127 aa4.64□□□□□ -1.67
CPSF7-215ENST00000536145 LINC00269Q8N2A0 174 aa4.64□□□□□ -1.67
CPSF7-215ENST00000536145 MAPK1IP1LQ8NDC0 245 aa4.64□□□□□ -1.67
CPSF7-215ENST00000536145 TMEM254Q8TBM7 123 aa4.64□□□□□ -1.67
CPSF7-215ENST00000536145 KMT2BQ9UMN6 2715 aaPredicted RBP4.64□□□□□ -1.67
CPSF7-215ENST00000536145 IGSF10Q6WRI0 2623 aa4.63□□□□□ -1.67
CPSF7-215ENST00000536145 HIVEP3Q5T1R4 2406 aa4.63□□□□□ -1.67
CPSF7-215ENST00000536145 BPY2O14599 106 aa4.63□□□□□ -1.67
CPSF7-215ENST00000536145 COX7BP24311 80 aa4.63□□□□□ -1.67
CPSF7-215ENST00000536145 ELOF1P60002 83 aaKnown RBP4.63□□□□□ -1.67
CPSF7-215ENST00000536145 SCXQ7RTU7 201 aa4.63□□□□□ -1.67
CPSF7-215ENST00000536145 WFDC11Q8NEX6 87 aa4.63□□□□□ -1.67
CPSF7-215ENST00000536145 DIRC1Q969H9 104 aa4.63□□□□□ -1.67
CPSF7-215ENST00000536145 PRO0255Q9UI72 69 aa4.63□□□□□ -1.67
CPSF7-215ENST00000536145 X6R8D5 127 aa4.63□□□□□ -1.67
CPSF7-215ENST00000536145 DCHS2Q6V1P9 2916 aa4.63□□□□□ -1.67
CPSF7-215ENST00000536145 ZFYVE26Q68DK2 2539 aa4.63□□□□□ -1.67
CPSF7-215ENST00000536145 ZNF462Q96JM2 2506 aa4.63□□□□□ -1.67
CPSF7-215ENST00000536145 FAM208BQ5VWN6 2430 aa4.62□□□□□ -1.67
CPSF7-215ENST00000536145 PRYO14603 147 aa4.62□□□□□ -1.67
CPSF7-215ENST00000536145 REG3AQ06141 175 aa4.62□□□□□ -1.67
CPSF7-215ENST00000536145 SPAG11BQ08648 103 aa4.62□□□□□ -1.67
CPSF7-215ENST00000536145 ITPR1Q14643 2758 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms