RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 TRAV8-4A0A0B4J246 113 aa9.24□□□□□ -0.93
VPS33B-202ENST00000535906 CKS1BP61024 79 aa9.24□□□□□ -0.93
VPS33B-202ENST00000535906 CLPSL2Q6UWE3 100 aa9.24□□□□□ -0.93
VPS33B-202ENST00000535906 ATP5G1P05496 136 aa9.23□□□□□ -0.93
VPS33B-202ENST00000535906 DEFB121Q5J5C9 76 aa9.23□□□□□ -0.93
VPS33B-202ENST00000535906 SPART-AS1P0CW21 52 aa9.22□□□□□ -0.93
VPS33B-202ENST00000535906 XCL1P47992 114 aa9.22□□□□□ -0.93
VPS33B-202ENST00000535906 KRTAP24-1Q3LI83 254 aa9.22□□□□□ -0.93
VPS33B-202ENST00000535906 MIR7-3HGQ8N6C7 128 aa9.22□□□□□ -0.93
VPS33B-202ENST00000535906 PKD1L1Q8TDX9 2849 aa9.22□□□□□ -0.93
VPS33B-202ENST00000535906 Q8N3U1 123 aa9.22□□□□□ -0.93
VPS33B-202ENST00000535906 TRAV13-2A0A0B4J235 113 aa9.21□□□□□ -0.93
VPS33B-202ENST00000535906 HTN3P15516 51 aa9.21□□□□□ -0.93
VPS33B-202ENST00000535906 KRTAP10-11P60412 298 aa9.21□□□□□ -0.93
VPS33B-202ENST00000535906 ANK2Q01484 3957 aa9.21□□□□□ -0.94
VPS33B-202ENST00000535906 SS18Q15532 418 aa9.21□□□□□ -0.94
VPS33B-202ENST00000535906 STAB1Q9NY15 2570 aa9.21□□□□□ -0.94
VPS33B-202ENST00000535906 IBA57-AS1B1ANH7 110 aa9.2□□□□□ -0.94
VPS33B-202ENST00000535906 SNCGO76070 127 aa9.2□□□□□ -0.94
VPS33B-202ENST00000535906 TRACP01848 142 aa9.2□□□□□ -0.94
VPS33B-202ENST00000535906 LINC00269Q8N2A0 174 aa9.2□□□□□ -0.94
VPS33B-202ENST00000535906 SND1-IT1Q9HBX3 110 aa9.2□□□□□ -0.94
VPS33B-202ENST00000535906 CRPP02741 224 aa9.19□□□□□ -0.94
VPS33B-202ENST00000535906 LINC00158P58513 81 aa9.19□□□□□ -0.94
VPS33B-202ENST00000535906 FAM240AA0A1B0GVK7 77 aa9.19□□□□□ -0.94
VPS33B-202ENST00000535906 RPL28P46779 137 aaKnown RBP9.19□□□□□ -0.94
VPS33B-202ENST00000535906 IGKV2-28A0A075B6P5 120 aa9.18□□□□□ -0.94
VPS33B-202ENST00000535906 IGKV2D-28P01615 120 aa9.18□□□□□ -0.94
VPS33B-202ENST00000535906 LINC00337Q8N6G1 96 aa9.18□□□□□ -0.94
VPS33B-202ENST00000535906 C11orf68Q9H3H3 251 aaKnown RBP9.17□□□□□ -0.94
VPS33B-202ENST00000535906 ANGP03950 147 aaKnown RBP9.17□□□□□ -0.94
VPS33B-202ENST00000535906 MRPL23Q16540 153 aaKnown RBP9.17□□□□□ -0.94
VPS33B-202ENST00000535906 C6orf226Q5I0X4 101 aa9.17□□□□□ -0.94
VPS33B-202ENST00000535906 CMYA5Q8N3K9 4069 aa9.17□□□□□ -0.94
VPS33B-202ENST00000535906 CCL18P55774 89 aa9.16□□□□□ -0.94
VPS33B-202ENST00000535906 FAM218AQ96MZ4 157 aa9.16□□□□□ -0.94
VPS33B-202ENST00000535906 RETNQ9HD89 108 aa9.16□□□□□ -0.94
VPS33B-202ENST00000535906 IGLV10-54A0A075B6I4 117 aa9.15□□□□□ -0.94
VPS33B-202ENST00000535906 PFN2P35080 140 aa9.15□□□□□ -0.94
VPS33B-202ENST00000535906 REG3AQ06141 175 aa9.15□□□□□ -0.94
VPS33B-202ENST00000535906 GAGE2BQ13066 116 aa9.15□□□□□ -0.94
VPS33B-202ENST00000535906 GAGE2EQ4V326 116 aa9.15□□□□□ -0.94
VPS33B-202ENST00000535906 C15orf53Q8NAA6 179 aa9.15□□□□□ -0.94
VPS33B-202ENST00000535906 GAGE2DQ9UEU5 116 aa9.15□□□□□ -0.94
VPS33B-202ENST00000535906 C3orf56Q8N813 242 aa9.15□□□□□ -0.94
VPS33B-202ENST00000535906 CD164L2Q6UWJ8 174 aa9.14□□□□□ -0.95
VPS33B-202ENST00000535906 CHCHD10Q8WYQ3 142 aaPredicted RBP9.14□□□□□ -0.95
VPS33B-202ENST00000535906 BAALC-AS2P0C853 105 aa9.14□□□□□ -0.95
VPS33B-202ENST00000535906 EGFEM1PQ0D2K5 195 aa9.14□□□□□ -0.95
VPS33B-202ENST00000535906 Q6Q795 121 aa9.14□□□□□ -0.95
VPS33B-202ENST00000535906 Q8IZM0 81 aa9.14□□□□□ -0.95
VPS33B-202ENST00000535906 LINC01561Q8N1V8 128 aa9.14□□□□□ -0.95
VPS33B-202ENST00000535906 LELP1Q5T871 98 aa9.13□□□□□ -0.95
VPS33B-202ENST00000535906 MAST4O15021 2626 aa9.13□□□□□ -0.95
VPS33B-202ENST00000535906 SMIM11BQ8TCY0 68 aa9.13□□□□□ -0.95
VPS33B-202ENST00000535906 C22orf24Q9Y442 160 aa9.12□□□□□ -0.95
VPS33B-202ENST00000535906 ACYP1P07311 99 aa9.11□□□□□ -0.95
VPS33B-202ENST00000535906 KIAA0087Q14695 138 aa9.11□□□□□ -0.95
VPS33B-202ENST00000535906 ANAPC13Q9BS18 74 aa9.11□□□□□ -0.95
VPS33B-202ENST00000535906 TTC32Q5I0X7 151 aa9.11□□□□□ -0.95
VPS33B-202ENST00000535906 TENM3Q9P273 2699 aa9.1□□□□□ -0.95
VPS33B-202ENST00000535906 LYPD5Q6UWN5 251 aa9.1□□□□□ -0.95
VPS33B-202ENST00000535906 H0YGX0 51 aa9.1□□□□□ -0.95
VPS33B-202ENST00000535906 Q9HAA7 133 aa9.1□□□□□ -0.95
VPS33B-202ENST00000535906 MALP21145 153 aa9.09□□□□□ -0.96
VPS33B-202ENST00000535906 Q6ZTC4 211 aa9.09□□□□□ -0.96
VPS33B-202ENST00000535906 KLK12Q9UKR0 248 aa9.09□□□□□ -0.96
VPS33B-202ENST00000535906 A0A087WYN8 130 aa9.08□□□□□ -0.96
VPS33B-202ENST00000535906 NDUFV3P56181 108 aaKnown RBP9.08□□□□□ -0.96
VPS33B-202ENST00000535906 DNAL4O96015 105 aa9.07□□□□□ -0.96
VPS33B-202ENST00000535906 PRR34Q9NV39 138 aa9.07□□□□□ -0.96
VPS33B-202ENST00000535906 INAFM2P0DMQ5 153 aa9.07□□□□□ -0.96
VPS33B-202ENST00000535906 KPRPQ5T749 579 aaPredicted RBP9.07□□□□□ -0.96
VPS33B-202ENST00000535906 NHLRC4P0CG21 123 aaPredicted RBP9.06□□□□□ -0.96
VPS33B-202ENST00000535906 CFAP161Q6P656 301 aa9.06□□□□□ -0.96
VPS33B-202ENST00000535906 ENHOQ6UWT2 76 aa9.06□□□□□ -0.96
VPS33B-202ENST00000535906 OR13C6PQ8NH95 151 aa9.06□□□□□ -0.96
VPS33B-202ENST00000535906 DNAH3Q8TD57 4116 aa9.06□□□□□ -0.96
VPS33B-202ENST00000535906 NOTCH1P46531 2555 aa9.06□□□□□ -0.96
VPS33B-202ENST00000535906 CXCL5P42830 114 aa9.06□□□□□ -0.96
VPS33B-202ENST00000535906 COL6A5A8TX70 2615 aa9.06□□□□□ -0.96
VPS33B-202ENST00000535906 CYSRT1A8MQ03 144 aa9.05□□□□□ -0.96
VPS33B-202ENST00000535906 COX17Q14061 63 aa9.05□□□□□ -0.96
VPS33B-202ENST00000535906 C9orf116Q5BN46 136 aaPredicted RBP9.05□□□□□ -0.96
VPS33B-202ENST00000535906 TRBV7-7A0A0K0K1E9 115 aa9.05□□□□□ -0.96
VPS33B-202ENST00000535906 A0A0J9YWU9 116 aa9.04□□□□□ -0.96
VPS33B-202ENST00000535906 H3BNG1 76 aa9.04□□□□□ -0.96
VPS33B-202ENST00000535906 WFDC10BQ8IUB3 73 aa9.04□□□□□ -0.96
VPS33B-202ENST00000535906 C6orf223Q8N319 242 aa9.04□□□□□ -0.96
VPS33B-202ENST00000535906 SDIM1Q6ZPB5 146 aa9.03□□□□□ -0.96
VPS33B-202ENST00000535906 LINC00526Q96FQ7 95 aa9.03□□□□□ -0.96
VPS33B-202ENST00000535906 KLK5Q9Y337 293 aaPredicted RBP9.03□□□□□ -0.96
VPS33B-202ENST00000535906 LECT2O14960 151 aa9.03□□□□□ -0.96
VPS33B-202ENST00000535906 NDUFC2O95298 119 aa9.03□□□□□ -0.96
VPS33B-202ENST00000535906 SMCR5Q8TEV8 140 aa9.03□□□□□ -0.96
VPS33B-202ENST00000535906 BAHCC1Q9P281 2608 aa9.02□□□□□ -0.96
VPS33B-202ENST00000535906 NANOS2P60321 138 aaKnown RBP9.02□□□□□ -0.97
VPS33B-202ENST00000535906 C10orf25Q5T742 122 aa9.02□□□□□ -0.97
VPS33B-202ENST00000535906 PRR3P79522 188 aaKnown RBP9.02□□□□□ -0.97
VPS33B-202ENST00000535906 LINC00643Q86TS7 51 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 267.2 ms