RNA–Protein interactions for RNA: ENST00000534555.5

RPS3-220, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-220ENST00000534555 LINC00614P0C842 121 aa9.55□□□□□ -0.88
RPS3-220ENST00000534555 RAB5BP61020 215 aa9.55□□□□□ -0.88
RPS3-220ENST00000534555 LINC00242Q5T6M2 205 aa9.55□□□□□ -0.88
RPS3-220ENST00000534555 LINC00173Q6ZV60 143 aa9.55□□□□□ -0.88
RPS3-220ENST00000534555 OR10D4PQ8NGN7 298 aa9.55□□□□□ -0.88
RPS3-220ENST00000534555 ZC2HC1BQ5TFG8 222 aa9.54□□□□□ -0.88
RPS3-220ENST00000534555 A0A087WZ39 114 aa9.53□□□□□ -0.88
RPS3-220ENST00000534555 KRTAP1-4P0C5Y4 121 aa9.53□□□□□ -0.88
RPS3-220ENST00000534555 SEC11AP67812 179 aa9.53□□□□□ -0.88
RPS3-220ENST00000534555 SPAG11BQ08648 103 aa9.53□□□□□ -0.88
RPS3-220ENST00000534555 LCE2AQ5TA79 106 aaPredicted RBP9.53□□□□□ -0.88
RPS3-220ENST00000534555 ORAOV1Q8WV07 137 aa9.53□□□□□ -0.88
RPS3-220ENST00000534555 IGLV1-50A0A075B6I6 118 aa9.52□□□□□ -0.89
RPS3-220ENST00000534555 FAM168BA1KXE4 195 aa9.52□□□□□ -0.89
RPS3-220ENST00000534555 C2orf48Q96LS8 159 aa9.52□□□□□ -0.89
RPS3-220ENST00000534555 HERVK_113P63121 156 aa9.51□□□□□ -0.89
RPS3-220ENST00000534555 FAM19A3Q7Z5A8 133 aa9.51□□□□□ -0.89
RPS3-220ENST00000534555 URB1-AS1Q96HZ7 61 aa9.51□□□□□ -0.89
RPS3-220ENST00000534555 FAT4Q6V0I7 4981 aa9.5□□□□□ -0.89
RPS3-220ENST00000534555 F8WDY8 70 aa9.5□□□□□ -0.89
RPS3-220ENST00000534555 HBDP02042 147 aa9.5□□□□□ -0.89
RPS3-220ENST00000534555 LINC01561Q8N1V8 128 aa9.5□□□□□ -0.89
RPS3-220ENST00000534555 GEMIN7Q9H840 131 aaKnown RBP9.5□□□□□ -0.89
RPS3-220ENST00000534555 CHCHD1Q96BP2 118 aaKnown RBP9.49□□□□□ -0.89
RPS3-220ENST00000534555 CST9LQ9H4G1 147 aa9.49□□□□□ -0.89
RPS3-220ENST00000534555 A0A096LNJ9 63 aa9.48□□□□□ -0.89
RPS3-220ENST00000534555 TRGC2P03986 189 aa9.48□□□□□ -0.89
RPS3-220ENST00000534555 PMVKQ15126 192 aa9.48□□□□□ -0.89
RPS3-220ENST00000534555 NDUFA1O15239 70 aa9.47□□□□□ -0.89
RPS3-220ENST00000534555 PMCHL1Q16048 86 aa9.47□□□□□ -0.89
RPS3-220ENST00000534555 RNF151Q2KHN1 245 aa9.47□□□□□ -0.89
RPS3-220ENST00000534555 FAM19A5Q7Z5A7 132 aaPredicted RBP9.47□□□□□ -0.89
RPS3-220ENST00000534555 TINCRA0A1B0GVN0 87 aa9.46□□□□□ -0.9
RPS3-220ENST00000534555 COLCA2A8K830 154 aa9.46□□□□□ -0.9
RPS3-220ENST00000534555 ATP5LO75964 103 aa9.46□□□□□ -0.9
RPS3-220ENST00000534555 PDZD11Q5EBL8 140 aa9.46□□□□□ -0.9
RPS3-220ENST00000534555 BAGE3Q86Y29 109 aa9.46□□□□□ -0.9
RPS3-220ENST00000534555 LINC00469Q8N7U9 141 aa9.46□□□□□ -0.9
RPS3-220ENST00000534555 PACRGQ96M98 296 aaPredicted RBP9.46□□□□□ -0.9
RPS3-220ENST00000534555 TSPAN13O95857 204 aa9.45□□□□□ -0.9
RPS3-220ENST00000534555 PRSS2P07478 247 aa9.45□□□□□ -0.9
RPS3-220ENST00000534555 KRTAP7-1Q8IUC3 87 aa9.45□□□□□ -0.9
RPS3-220ENST00000534555 MRPL35Q9NZE8 188 aaKnown RBP9.45□□□□□ -0.9
RPS3-220ENST00000534555 CDKN2A-AS1Q9UH64 79 aa9.45□□□□□ -0.9
RPS3-220ENST00000534555 NDUFA6P56556 154 aa9.44□□□□□ -0.9
RPS3-220ENST00000534555 KIAA0087Q14695 138 aa9.44□□□□□ -0.9
RPS3-220ENST00000534555 C10orf25Q5T742 122 aa9.44□□□□□ -0.9
RPS3-220ENST00000534555 RPL13AP40429 203 aaKnown RBP9.43□□□□□ -0.9
RPS3-220ENST00000534555 GAGE2EQ4V326 116 aa9.43□□□□□ -0.9
RPS3-220ENST00000534555 GAGE2DQ9UEU5 116 aa9.43□□□□□ -0.9
RPS3-220ENST00000534555 IGLV5-45A0A087WSX0 123 aa9.42□□□□□ -0.9
RPS3-220ENST00000534555 HSBP1O75506 76 aa9.42□□□□□ -0.9
RPS3-220ENST00000534555 CKS1BP61024 79 aa9.42□□□□□ -0.9
RPS3-220ENST00000534555 C6orf226Q5I0X4 101 aa9.42□□□□□ -0.9
RPS3-220ENST00000534555 UNQ6190/PRO20217Q6UXQ8 127 aa9.42□□□□□ -0.9
RPS3-220ENST00000534555 Q8IZM0 81 aa9.42□□□□□ -0.9
RPS3-220ENST00000534555 TOMM7Q9P0U1 55 aa9.42□□□□□ -0.9
RPS3-220ENST00000534555 H3BRM9 83 aa9.41□□□□□ -0.9
RPS3-220ENST00000534555 SCO1O75880 301 aa9.41□□□□□ -0.9
RPS3-220ENST00000534555 UBE2BP63146 152 aa9.41□□□□□ -0.9
RPS3-220ENST00000534555 C6orf48Q9UBA6 75 aa9.41□□□□□ -0.9
RPS3-220ENST00000534555 TRBV30A0A0K0K1B3 111 aa9.4□□□□□ -0.9
RPS3-220ENST00000534555 M0QXV9 152 aa9.4□□□□□ -0.9
RPS3-220ENST00000534555 TLX1NBP0CAT3 122 aa9.4□□□□□ -0.9
RPS3-220ENST00000534555 IGLC3P0DOY3 106 aa9.4□□□□□ -0.9
RPS3-220ENST00000534555 C2orf82Q6UX34 121 aa9.4□□□□□ -0.9
RPS3-220ENST00000534555 SMIM1B2RUZ4 78 aa9.39□□□□□ -0.91
RPS3-220ENST00000534555 SERF1AO75920 110 aa9.38□□□□□ -0.91
RPS3-220ENST00000534555 CXCL5P42830 114 aa9.38□□□□□ -0.91
RPS3-220ENST00000534555 IFI27L1Q96BM0 104 aa9.38□□□□□ -0.91
RPS3-220ENST00000534555 SPINK8P0C7L1 97 aa9.37□□□□□ -0.91
RPS3-220ENST00000534555 FAM19A2Q8N3H0 131 aa9.37□□□□□ -0.91
RPS3-220ENST00000534555 COX7B2Q8TF08 81 aa9.37□□□□□ -0.91
RPS3-220ENST00000534555 F8VRH5 84 aa9.36□□□□□ -0.91
RPS3-220ENST00000534555 CHTOPQ9Y3Y2 248 aaKnown RBP9.36□□□□□ -0.91
RPS3-220ENST00000534555 MUC17Q685J3 4493 aa9.36□□□□□ -0.91
RPS3-220ENST00000534555 TRAV12-1A0A0B4J245 112 aa9.35□□□□□ -0.91
RPS3-220ENST00000534555 NDUFC2-KCTD14E9PQ53 114 aa9.35□□□□□ -0.91
RPS3-220ENST00000534555 ZNF22P17026 224 aaPredicted RBP9.35□□□□□ -0.91
RPS3-220ENST00000534555 ZNF861PO60384 105 aa9.34□□□□□ -0.91
RPS3-220ENST00000534555 LEPROTL1O95214 131 aa9.34□□□□□ -0.91
RPS3-220ENST00000534555 LINC00310P59036 64 aa9.34□□□□□ -0.91
RPS3-220ENST00000534555 C9orf129Q5T035 196 aaKnown RBP9.34□□□□□ -0.91
RPS3-220ENST00000534555 A0A087X002 238 aa9.33□□□□□ -0.92
RPS3-220ENST00000534555 C11orf86A6NJI1 115 aa9.33□□□□□ -0.92
RPS3-220ENST00000534555 TMEM170BQ5T4T1 132 aa9.33□□□□□ -0.92
RPS3-220ENST00000534555 HSPB8Q9UJY1 196 aa9.33□□□□□ -0.92
RPS3-220ENST00000534555 IGLV5-39A0A0G2JS06 123 aa9.32□□□□□ -0.92
RPS3-220ENST00000534555 HIST1H2BKO60814 126 aa9.31□□□□□ -0.92
RPS3-220ENST00000534555 HIST1H2BJP06899 126 aa9.31□□□□□ -0.92
RPS3-220ENST00000534555 S100A1P23297 94 aa9.31□□□□□ -0.92
RPS3-220ENST00000534555 HIST1H2BOP23527 126 aa9.31□□□□□ -0.92
RPS3-220ENST00000534555 HIST1H2BBP33778 126 aa9.31□□□□□ -0.92
RPS3-220ENST00000534555 HIST1H2BDP58876 126 aa9.31□□□□□ -0.92
RPS3-220ENST00000534555 HIST1H2BCP62807 126 aa9.31□□□□□ -0.92
RPS3-220ENST00000534555 HIST2H2BEQ16778 126 aa9.31□□□□□ -0.92
RPS3-220ENST00000534555 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.31□□□□□ -0.92
RPS3-220ENST00000534555 HIST1H2BHQ93079 126 aa9.31□□□□□ -0.92
RPS3-220ENST00000534555 HIST1H2BNQ99877 126 aa9.31□□□□□ -0.92
RPS3-220ENST00000534555 HIST1H2BMQ99879 126 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms