RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 DEFB131BA0A096LNP1 70 aa4.25□□□□□ -1.73
CMTM1-220ENST00000534143 IGKV2D-26A0A0A0MRZ7 120 aa4.25□□□□□ -1.73
CMTM1-220ENST00000534143 TRAV10A0A0B4J240 114 aa4.25□□□□□ -1.73
CMTM1-220ENST00000534143 H3BNG1 76 aa4.25□□□□□ -1.73
CMTM1-220ENST00000534143 VCYO14598 125 aa4.25□□□□□ -1.73
CMTM1-220ENST00000534143 ACYP1P07311 99 aa4.25□□□□□ -1.73
CMTM1-220ENST00000534143 RPL36AP83881 106 aaKnown RBP4.25□□□□□ -1.73
CMTM1-220ENST00000534143 C10orf126Q8N4M7 172 aa4.25□□□□□ -1.73
CMTM1-220ENST00000534143 RPL36ALQ969Q0 106 aaKnown RBP4.25□□□□□ -1.73
CMTM1-220ENST00000534143 UBE2WQ96B02 151 aa4.25□□□□□ -1.73
CMTM1-220ENST00000534143 PRO1854Q9UHT4 67 aa4.25□□□□□ -1.73
CMTM1-220ENST00000534143 DNAH1Q9P2D7 4330 aa4.25□□□□□ -1.73
CMTM1-220ENST00000534143 RYR2Q92736 4967 aa4.24□□□□□ -1.73
CMTM1-220ENST00000534143 TENM3Q9P273 2699 aa4.24□□□□□ -1.73
CMTM1-220ENST00000534143 A0A096LPF7 62 aa4.24□□□□□ -1.73
CMTM1-220ENST00000534143 A0A0J9YY99 117 aa4.24□□□□□ -1.73
CMTM1-220ENST00000534143 C9JAW5 83 aa4.24□□□□□ -1.73
CMTM1-220ENST00000534143 I3L3M4 83 aa4.24□□□□□ -1.73
CMTM1-220ENST00000534143 J3KT08 172 aa4.24□□□□□ -1.73
CMTM1-220ENST00000534143 LGALS3P17931 250 aaKnown RBP4.24□□□□□ -1.73
CMTM1-220ENST00000534143 TMEM170BQ5T4T1 132 aa4.24□□□□□ -1.73
CMTM1-220ENST00000534143 IMUPQ9GZP8 106 aa4.24□□□□□ -1.73
CMTM1-220ENST00000534143 IGHV3-38A0A0C4DH36 116 aa4.23□□□□□ -1.73
CMTM1-220ENST00000534143 FAM240AA0A1B0GVK7 77 aa4.23□□□□□ -1.73
CMTM1-220ENST00000534143 H3BT86 120 aa4.23□□□□□ -1.73
CMTM1-220ENST00000534143 TSHBP01222 138 aa4.23□□□□□ -1.73
CMTM1-220ENST00000534143 UBE2D1P51668 147 aa4.23□□□□□ -1.73
CMTM1-220ENST00000534143 C9orf153Q5TBE3 101 aa4.23□□□□□ -1.73
CMTM1-220ENST00000534143 NTM-AS1Q6ZSK4 140 aa4.23□□□□□ -1.73
CMTM1-220ENST00000534143 DAZ4Q86SG3 579 aaKnown RBP4.23□□□□□ -1.73
CMTM1-220ENST00000534143 NFE4Q86UQ8 179 aa4.23□□□□□ -1.73
CMTM1-220ENST00000534143 C15orf53Q8NAA6 179 aa4.23□□□□□ -1.73
CMTM1-220ENST00000534143 DAZ3Q9NR90 486 aaKnown RBP4.23□□□□□ -1.73
CMTM1-220ENST00000534143 ICOSQ9Y6W8 199 aa4.23□□□□□ -1.73
CMTM1-220ENST00000534143 HYDINQ4G0P3 5121 aa4.23□□□□□ -1.73
CMTM1-220ENST00000534143 A0A0B4J2C4 111 aa4.22□□□□□ -1.73
CMTM1-220ENST00000534143 TCL1BO95988 128 aa4.22□□□□□ -1.73
CMTM1-220ENST00000534143 MAPKAPK5-AS1Q8N8E1 139 aa4.22□□□□□ -1.73
CMTM1-220ENST00000534143 DEFB104AQ8WTQ1 72 aa4.22□□□□□ -1.73
CMTM1-220ENST00000534143 TMEM141Q96I45 108 aa4.22□□□□□ -1.73
CMTM1-220ENST00000534143 KIR2DL4Q99706 377 aa4.22□□□□□ -1.73
CMTM1-220ENST00000534143 CHCHD7Q9BUK0 85 aa4.22□□□□□ -1.73
CMTM1-220ENST00000534143 EPPK1P58107 5090 aaKnown RBP4.21□□□□□ -1.73
CMTM1-220ENST00000534143 PLECQ15149 4684 aaKnown RBP4.21□□□□□ -1.74
CMTM1-220ENST00000534143 TRBV10-2A0A0K0K1G8 114 aa4.21□□□□□ -1.74
CMTM1-220ENST00000534143 CCDC179H3BU77 68 aa4.21□□□□□ -1.74
CMTM1-220ENST00000534143 CFC1BP0CG36 223 aa4.21□□□□□ -1.74
CMTM1-220ENST00000534143 CFC1P0CG37 223 aa4.21□□□□□ -1.74
CMTM1-220ENST00000534143 TIRAPP58753 221 aa4.21□□□□□ -1.74
CMTM1-220ENST00000534143 CEMP1Q6PRD7 247 aaPredicted RBP4.21□□□□□ -1.74
CMTM1-220ENST00000534143 LYPD5Q6UWN5 251 aa4.21□□□□□ -1.74
CMTM1-220ENST00000534143 C2orf82Q6UX34 121 aa4.21□□□□□ -1.74
CMTM1-220ENST00000534143 C20orf203Q8NBC4 194 aa4.21□□□□□ -1.74
CMTM1-220ENST00000534143 COPS9Q8WXC6 57 aa4.21□□□□□ -1.74
CMTM1-220ENST00000534143 TOMM6Q96B49 74 aa4.21□□□□□ -1.74
CMTM1-220ENST00000534143 CARD19Q96LW7 228 aa4.21□□□□□ -1.74
CMTM1-220ENST00000534143 TTTY13Q9BZ97 58 aa4.21□□□□□ -1.74
CMTM1-220ENST00000534143 TRBV6-8A0A0A6YYG3 113 aa4.2□□□□□ -1.74
CMTM1-220ENST00000534143 A0A1B0GX51 115 aa4.2□□□□□ -1.74
CMTM1-220ENST00000534143 UQCRQO14949 82 aa4.2□□□□□ -1.74
CMTM1-220ENST00000534143 ESRGQ1W209 222 aa4.2□□□□□ -1.74
CMTM1-220ENST00000534143 LINC01620Q4KN68 170 aa4.2□□□□□ -1.74
CMTM1-220ENST00000534143 PLEKHB2Q96CS7 222 aa4.2□□□□□ -1.74
CMTM1-220ENST00000534143 APLNQ9ULZ1 77 aa4.2□□□□□ -1.74
CMTM1-220ENST00000534143 NUPR2A6NF83 97 aa4.19□□□□□ -1.74
CMTM1-220ENST00000534143 IGIPA6NJ69 53 aa4.19□□□□□ -1.74
CMTM1-220ENST00000534143 C11orf86A6NJI1 115 aa4.19□□□□□ -1.74
CMTM1-220ENST00000534143 H7C423 109 aa4.19□□□□□ -1.74
CMTM1-220ENST00000534143 RPL39P62891 51 aaKnown RBP4.19□□□□□ -1.74
CMTM1-220ENST00000534143 PMVKQ15126 192 aa4.19□□□□□ -1.74
CMTM1-220ENST00000534143 LELP1Q5T871 98 aa4.19□□□□□ -1.74
CMTM1-220ENST00000534143 SFTA2Q6UW10 78 aa4.19□□□□□ -1.74
CMTM1-220ENST00000534143 C2orf66Q6UXQ4 117 aa4.19□□□□□ -1.74
CMTM1-220ENST00000534143 C3orf22Q8N5N4 141 aa4.19□□□□□ -1.74
CMTM1-220ENST00000534143 FAM104AQ969W3 186 aa4.19□□□□□ -1.74
CMTM1-220ENST00000534143 TMEM243Q9BU79 118 aa4.19□□□□□ -1.74
CMTM1-220ENST00000534143 TIMM21Q9BVV7 248 aa4.19□□□□□ -1.74
CMTM1-220ENST00000534143 PYGO1Q9Y3Y4 419 aa4.19□□□□□ -1.74
CMTM1-220ENST00000534143 STAB2Q8WWQ8 2551 aa4.19□□□□□ -1.74
CMTM1-220ENST00000534143 ALMS1Q8TCU4 4167 aa4.18□□□□□ -1.74
CMTM1-220ENST00000534143 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.18□□□□□ -1.74
CMTM1-220ENST00000534143 TRBV30A0A0K0K1B3 111 aa4.18□□□□□ -1.74
CMTM1-220ENST00000534143 TRBV7-7A0A0K0K1E9 115 aa4.18□□□□□ -1.74
CMTM1-220ENST00000534143 IGKV2-29A2NJV5 120 aaPredicted RBP4.18□□□□□ -1.74
CMTM1-220ENST00000534143 ATOX1O00244 68 aa4.18□□□□□ -1.74
CMTM1-220ENST00000534143 MUC7Q8TAX7 377 aa4.18□□□□□ -1.74
CMTM1-220ENST00000534143 BAALCQ8WXS3 180 aa4.18□□□□□ -1.74
CMTM1-220ENST00000534143 LINC01600Q96MT4 127 aa4.18□□□□□ -1.74
CMTM1-220ENST00000534143 UBE2D4Q9Y2X8 147 aa4.18□□□□□ -1.74
CMTM1-220ENST00000534143 KLK5Q9Y337 293 aaPredicted RBP4.18□□□□□ -1.74
CMTM1-220ENST00000534143 CSDC2Q9Y534 153 aaKnown RBP4.18□□□□□ -1.74
CMTM1-220ENST00000534143 A0A1B0GUV1 79 aa4.17□□□□□ -1.74
CMTM1-220ENST00000534143 H7C2G1 150 aa4.17□□□□□ -1.74
CMTM1-220ENST00000534143 J3QQQ9 107 aa4.17□□□□□ -1.74
CMTM1-220ENST00000534143 LEPROTO15243 131 aa4.17□□□□□ -1.74
CMTM1-220ENST00000534143 IGHV3-30P01768 117 aa4.17□□□□□ -1.74
CMTM1-220ENST00000534143 TRACP01848 142 aa4.17□□□□□ -1.74
CMTM1-220ENST00000534143 IGHV3-30-5P0DP03 117 aa4.17□□□□□ -1.74
CMTM1-220ENST00000534143 CXCL5P42830 114 aa4.17□□□□□ -1.74
CMTM1-220ENST00000534143 RPS28P62857 69 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms