RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 RBMY1DP0C7P1 496 aaKnown RBP4.1□□□□□ -1.75
CLNS1A-212ENST00000533957 CXCL5P42830 114 aa4.1□□□□□ -1.75
CLNS1A-212ENST00000533957 GAGE5Q13069 117 aa4.1□□□□□ -1.75
CLNS1A-212ENST00000533957 GAGE6Q13070 117 aa4.1□□□□□ -1.75
CLNS1A-212ENST00000533957 DAND5Q8N907 189 aa4.1□□□□□ -1.75
CLNS1A-212ENST00000533957 ZNF625Q96I27 306 aaPredicted RBP4.1□□□□□ -1.75
CLNS1A-212ENST00000533957 Q9H8V8 135 aa4.1□□□□□ -1.75
CLNS1A-212ENST00000533957 CSPG4Q6UVK1 2322 aa4.1□□□□□ -1.75
CLNS1A-212ENST00000533957 SONP18583 2426 aaKnown RBP4.1□□□□□ -1.75
CLNS1A-212ENST00000533957 HIVEP2P31629 2446 aa4.1□□□□□ -1.75
CLNS1A-212ENST00000533957 C2CD3Q4AC94 2353 aa4.09□□□□□ -1.75
CLNS1A-212ENST00000533957 TRGV2A0A075B6R0 118 aa4.09□□□□□ -1.75
CLNS1A-212ENST00000533957 A0A087WZ39 114 aa4.09□□□□□ -1.75
CLNS1A-212ENST00000533957 TRBV6-8A0A0A6YYG3 113 aa4.09□□□□□ -1.75
CLNS1A-212ENST00000533957 TRAV8-3A0A0A6YYJ7 113 aa4.09□□□□□ -1.75
CLNS1A-212ENST00000533957 SMIM1B2RUZ4 78 aa4.09□□□□□ -1.75
CLNS1A-212ENST00000533957 SS18Q15532 418 aa4.09□□□□□ -1.75
CLNS1A-212ENST00000533957 S100A7L2Q5SY68 101 aa4.09□□□□□ -1.75
CLNS1A-212ENST00000533957 ADAMTSL4-AS1Q5T5F5 129 aa4.09□□□□□ -1.75
CLNS1A-212ENST00000533957 C10orf99Q6UWK7 81 aa4.09□□□□□ -1.75
CLNS1A-212ENST00000533957 LINC00643Q86TS7 51 aa4.09□□□□□ -1.75
CLNS1A-212ENST00000533957 XCL2Q9UBD3 114 aa4.09□□□□□ -1.75
CLNS1A-212ENST00000533957 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.08□□□□□ -1.76
CLNS1A-212ENST00000533957 IGHV3-73A0A0B4J1V6 119 aa4.08□□□□□ -1.76
CLNS1A-212ENST00000533957 TRGV4A0A0C4DH28 118 aa4.08□□□□□ -1.76
CLNS1A-212ENST00000533957 TRBV7-7A0A0K0K1E9 115 aa4.08□□□□□ -1.76
CLNS1A-212ENST00000533957 IGKV2-29A2NJV5 120 aaPredicted RBP4.08□□□□□ -1.76
CLNS1A-212ENST00000533957 LYRM9A8MSI8 78 aa4.08□□□□□ -1.76
CLNS1A-212ENST00000533957 F5H768 121 aa4.08□□□□□ -1.76
CLNS1A-212ENST00000533957 CRLF1O75462 422 aa4.08□□□□□ -1.76
CLNS1A-212ENST00000533957 NDUFC2O95298 119 aa4.08□□□□□ -1.76
CLNS1A-212ENST00000533957 DNAL4O96015 105 aa4.08□□□□□ -1.76
CLNS1A-212ENST00000533957 EDN2P20800 178 aa4.08□□□□□ -1.76
CLNS1A-212ENST00000533957 LINC00612Q8N6U2 182 aa4.08□□□□□ -1.76
CLNS1A-212ENST00000533957 COX7B2Q8TF08 81 aa4.08□□□□□ -1.76
CLNS1A-212ENST00000533957 ANAPC13Q9BS18 74 aa4.08□□□□□ -1.76
CLNS1A-212ENST00000533957 MAP1AP78559 2803 aaPredicted RBP4.08□□□□□ -1.76
CLNS1A-212ENST00000533957 MTORP42345 2549 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 IGHV3-64A0A075B6Q5 118 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 IGHV3OR16-9A0A0B4J2B5 98 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 GAGE12JA6NER3 117 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 JMJD7-PLA2G4BH0Y9G9 81 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 GAGE7O76087 117 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 CRPP02741 224 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 GAGE12FP0CL80 117 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 GAGE12GP0CL81 117 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 GAGE12IP0CL82 117 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 XGP55808 180 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 HILS1P60008 231 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 GAGE4Q13068 117 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 KRTAP21-3Q3LHN1 58 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 SDIM1Q6ZPB5 146 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 Q8IZM0 81 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 CSNK1G2-AS1Q8NCQ2 148 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 LINC01006Q8NI28 216 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 CITED2Q99967 270 aaPredicted RBP4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 TMEM126AQ9H061 195 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 PRO0255Q9UI72 69 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 DNHD1Q96M86 4753 aa4.07□□□□□ -1.76
CLNS1A-212ENST00000533957 TRAV13-1A0A0B4J241 112 aa4.06□□□□□ -1.76
CLNS1A-212ENST00000533957 IGHV4-28A0A0C4DH34 117 aa4.06□□□□□ -1.76
CLNS1A-212ENST00000533957 TEX49A0A1B0GTD5 131 aa4.06□□□□□ -1.76
CLNS1A-212ENST00000533957 H7C2G1 150 aa4.06□□□□□ -1.76
CLNS1A-212ENST00000533957 MT-ATP8P03928 68 aa4.06□□□□□ -1.76
CLNS1A-212ENST00000533957 BAALC-AS2P0C853 105 aa4.06□□□□□ -1.76
CLNS1A-212ENST00000533957 NDUFV3P56181 108 aaKnown RBP4.06□□□□□ -1.76
CLNS1A-212ENST00000533957 DEFB136Q30KP8 78 aa4.06□□□□□ -1.76
CLNS1A-212ENST00000533957 C6orf226Q5I0X4 101 aa4.06□□□□□ -1.76
CLNS1A-212ENST00000533957 CEMP1Q6PRD7 247 aaPredicted RBP4.06□□□□□ -1.76
CLNS1A-212ENST00000533957 NTM-AS1Q6ZSK4 140 aa4.06□□□□□ -1.76
CLNS1A-212ENST00000533957 NOP10Q9NPE3 64 aaKnown RBP4.06□□□□□ -1.76
CLNS1A-212ENST00000533957 F8WDY8 70 aa4.05□□□□□ -1.76
CLNS1A-212ENST00000533957 TMEM256-PLSCR3K7ERE1 68 aa4.05□□□□□ -1.76
CLNS1A-212ENST00000533957 LINC00694P0DN24 101 aa4.05□□□□□ -1.76
CLNS1A-212ENST00000533957 PDE6GP18545 87 aa4.05□□□□□ -1.76
CLNS1A-212ENST00000533957 COX6A2Q02221 97 aa4.05□□□□□ -1.76
CLNS1A-212ENST00000533957 Q6ZTI0 123 aa4.05□□□□□ -1.76
CLNS1A-212ENST00000533957 PRR26Q8N8Z3 221 aa4.05□□□□□ -1.76
CLNS1A-212ENST00000533957 SND1-IT1Q9HBX3 110 aa4.05□□□□□ -1.76
CLNS1A-212ENST00000533957 SELENOKQ9Y6D0 94 aa4.05□□□□□ -1.76
CLNS1A-212ENST00000533957 NF1P21359 2839 aa4.04□□□□□ -1.76
CLNS1A-212ENST00000533957 IGHV3-38A0A0C4DH36 116 aa4.04□□□□□ -1.76
CLNS1A-212ENST00000533957 BCE1O60756 84 aa4.04□□□□□ -1.76
CLNS1A-212ENST00000533957 APOC4P55056 127 aa4.04□□□□□ -1.76
CLNS1A-212ENST00000533957 C9orf66Q5T8R8 295 aa4.04□□□□□ -1.76
CLNS1A-212ENST00000533957 ATP5EP2Q5VTU8 51 aa4.04□□□□□ -1.76
CLNS1A-212ENST00000533957 CHCHD5Q9BSY4 110 aa4.04□□□□□ -1.76
CLNS1A-212ENST00000533957 A0A087WYN8 130 aa4.03□□□□□ -1.76
CLNS1A-212ENST00000533957 TRBV10-3A0A0K0K1G6 114 aa4.03□□□□□ -1.76
CLNS1A-212ENST00000533957 LINC00959A0A1B0GUT2 108 aa4.03□□□□□ -1.76
CLNS1A-212ENST00000533957 PLAC8L1A1L4L8 177 aa4.03□□□□□ -1.76
CLNS1A-212ENST00000533957 LINC00158P58513 81 aa4.03□□□□□ -1.76
CLNS1A-212ENST00000533957 CD164L2Q6UWJ8 174 aa4.03□□□□□ -1.76
CLNS1A-212ENST00000533957 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.03□□□□□ -1.76
CLNS1A-212ENST00000533957 OBSCN-AS1Q96MR7 158 aa4.03□□□□□ -1.76
CLNS1A-212ENST00000533957 SETD2Q9BYW2 2564 aaPredicted RBP4.03□□□□□ -1.77
CLNS1A-212ENST00000533957 H3BNG1 76 aa4.02□□□□□ -1.77
CLNS1A-212ENST00000533957 GIG44P09565 113 aaPredicted RBP4.02□□□□□ -1.77
CLNS1A-212ENST00000533957 MIFP14174 115 aa4.02□□□□□ -1.77
CLNS1A-212ENST00000533957 MIR7-3HGQ8N6C7 128 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms