RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 S100A1P23297 94 aa6.86□□□□□ -1.31
SVIP-205ENST00000533774 UBE2AP49459 152 aa6.86□□□□□ -1.31
SVIP-205ENST00000533774 MRPL51Q4U2R6 128 aaKnown RBP6.85□□□□□ -1.31
SVIP-205ENST00000533774 BORCS7Q96B45 105 aa6.85□□□□□ -1.31
SVIP-205ENST00000533774 PPP1R2P9O14990 202 aa6.84□□□□□ -1.31
SVIP-205ENST00000533774 RPL32P62910 135 aaKnown RBP6.84□□□□□ -1.31
SVIP-205ENST00000533774 PRLHP81277 87 aa6.84□□□□□ -1.31
SVIP-205ENST00000533774 PNRC1Q12796 327 aaPredicted RBP6.84□□□□□ -1.31
SVIP-205ENST00000533774 ZC2HC1BQ5TFG8 222 aa6.84□□□□□ -1.31
SVIP-205ENST00000533774 TOMM7Q9P0U1 55 aa6.84□□□□□ -1.31
SVIP-205ENST00000533774 FLGP20930 4061 aaPredicted RBP6.84□□□□□ -1.32
SVIP-205ENST00000533774 IGLV4-3A0A075B6K6 122 aa6.83□□□□□ -1.32
SVIP-205ENST00000533774 KANTRA0A1W2PQU2 76 aa6.83□□□□□ -1.32
SVIP-205ENST00000533774 TCAPO15273 167 aa6.83□□□□□ -1.32
SVIP-205ENST00000533774 SCO1O75880 301 aa6.83□□□□□ -1.32
SVIP-205ENST00000533774 PPP1R17O96001 155 aa6.83□□□□□ -1.32
SVIP-205ENST00000533774 LINC01561Q8N1V8 128 aa6.83□□□□□ -1.32
SVIP-205ENST00000533774 TRBV24-1A0A075B6N3 115 aa6.82□□□□□ -1.32
SVIP-205ENST00000533774 NDUFA5Q16718 116 aa6.82□□□□□ -1.32
SVIP-205ENST00000533774 C20orf78Q9BR46 151 aa6.82□□□□□ -1.32
SVIP-205ENST00000533774 SMIM2Q9BVW6 85 aa6.82□□□□□ -1.32
SVIP-205ENST00000533774 LOC105371267A0A1B0GV96 52 aa6.81□□□□□ -1.32
SVIP-205ENST00000533774 HMSDA8MTL9 139 aa6.81□□□□□ -1.32
SVIP-205ENST00000533774 CKS1BP61024 79 aa6.81□□□□□ -1.32
SVIP-205ENST00000533774 C6orf226Q5I0X4 101 aa6.81□□□□□ -1.32
SVIP-205ENST00000533774 LCE4AQ5TA78 99 aa6.81□□□□□ -1.32
SVIP-205ENST00000533774 FAM104BQ5XKR9 115 aa6.81□□□□□ -1.32
SVIP-205ENST00000533774 SPAG11AQ6PDA7 123 aa6.81□□□□□ -1.32
SVIP-205ENST00000533774 Q8IZM0 81 aa6.81□□□□□ -1.32
SVIP-205ENST00000533774 PLEKHB2Q96CS7 222 aa6.81□□□□□ -1.32
SVIP-205ENST00000533774 IGLV5-37A0A075B6J1 123 aa6.8□□□□□ -1.32
SVIP-205ENST00000533774 IGKV2-28A0A075B6P5 120 aa6.8□□□□□ -1.32
SVIP-205ENST00000533774 TEX46H3BTG2 121 aa6.8□□□□□ -1.32
SVIP-205ENST00000533774 TNFRSF6BO95407 300 aa6.8□□□□□ -1.32
SVIP-205ENST00000533774 IGKV2D-28P01615 120 aa6.8□□□□□ -1.32
SVIP-205ENST00000533774 PRSS2P07478 247 aa6.8□□□□□ -1.32
SVIP-205ENST00000533774 S100A12P80511 92 aa6.8□□□□□ -1.32
SVIP-205ENST00000533774 SSPOA2VEC9 5147 aa6.8□□□□□ -1.32
SVIP-205ENST00000533774 Q6ZN92 141 aa6.79□□□□□ -1.32
SVIP-205ENST00000533774 SLC51BQ86UW2 128 aa6.79□□□□□ -1.32
SVIP-205ENST00000533774 DAND5Q8N907 189 aa6.79□□□□□ -1.32
SVIP-205ENST00000533774 KRTAP9-9Q9BYP9 154 aa6.79□□□□□ -1.32
SVIP-205ENST00000533774 KRTAP9-4Q9BYQ2 154 aa6.79□□□□□ -1.32
SVIP-205ENST00000533774 TMEM238C9JI98 176 aa6.78□□□□□ -1.32
SVIP-205ENST00000533774 NPYP01303 97 aa6.78□□□□□ -1.32
SVIP-205ENST00000533774 RIGQ13278 110 aa6.78□□□□□ -1.32
SVIP-205ENST00000533774 RGS21Q2M5E4 152 aa6.78□□□□□ -1.32
SVIP-205ENST00000533774 TMEM141Q96I45 108 aa6.78□□□□□ -1.32
SVIP-205ENST00000533774 ALKBH7Q9BT30 221 aaPredicted RBP6.78□□□□□ -1.32
SVIP-205ENST00000533774 EIF5A2Q9GZV4 153 aaKnown RBP6.78□□□□□ -1.32
SVIP-205ENST00000533774 PYGO1Q9Y3Y4 419 aa6.78□□□□□ -1.32
SVIP-205ENST00000533774 F8VRH5 84 aa6.77□□□□□ -1.33
SVIP-205ENST00000533774 CKS2P33552 79 aa6.77□□□□□ -1.33
SVIP-205ENST00000533774 IFI27P40305 119 aaPredicted RBP6.77□□□□□ -1.33
SVIP-205ENST00000533774 FAM19A1Q7Z5A9 133 aa6.77□□□□□ -1.33
SVIP-205ENST00000533774 Q8NBF4 154 aa6.77□□□□□ -1.33
SVIP-205ENST00000533774 V9GYV3 84 aa6.77□□□□□ -1.33
SVIP-205ENST00000533774 LINC00862A6NCI5 91 aa6.76□□□□□ -1.33
SVIP-205ENST00000533774 LINC01551Q86U37 167 aa6.76□□□□□ -1.33
SVIP-205ENST00000533774 OSTCQ9NRP0 149 aa6.76□□□□□ -1.33
SVIP-205ENST00000533774 D6R8Y8 96 aa6.75□□□□□ -1.33
SVIP-205ENST00000533774 TMEM250H0YL14 139 aa6.75□□□□□ -1.33
SVIP-205ENST00000533774 TEX43Q6ZNM6 134 aa6.75□□□□□ -1.33
SVIP-205ENST00000533774 AMELXQ99217 191 aa6.75□□□□□ -1.33
SVIP-205ENST00000533774 TMEM126AQ9H061 195 aa6.75□□□□□ -1.33
SVIP-205ENST00000533774 CBY1Q9Y3M2 126 aa6.75□□□□□ -1.33
SVIP-205ENST00000533774 USH2AO75445 5202 aa6.75□□□□□ -1.33
SVIP-205ENST00000533774 M0R378 163 aa6.74□□□□□ -1.33
SVIP-205ENST00000533774 TAGLN2P37802 199 aaKnown RBP6.74□□□□□ -1.33
SVIP-205ENST00000533774 CEBPGP53567 150 aa6.74□□□□□ -1.33
SVIP-205ENST00000533774 NKAPP1Q8N9T2 125 aa6.74□□□□□ -1.33
SVIP-205ENST00000533774 SPRR4Q96PI1 79 aa6.74□□□□□ -1.33
SVIP-205ENST00000533774 CDKN2A-AS1Q9UH64 79 aa6.74□□□□□ -1.33
SVIP-205ENST00000533774 FAM19A3Q7Z5A8 133 aa6.73□□□□□ -1.33
SVIP-205ENST00000533774 CBLN2Q8IUK8 224 aa6.73□□□□□ -1.33
SVIP-205ENST00000533774 RAB5BP61020 215 aa6.72□□□□□ -1.33
SVIP-205ENST00000533774 PCOTHQ58A44 107 aa6.72□□□□□ -1.33
SVIP-205ENST00000533774 C2orf66Q6UXQ4 117 aa6.72□□□□□ -1.33
SVIP-205ENST00000533774 Q8N377 158 aa6.72□□□□□ -1.33
SVIP-205ENST00000533774 HSBP1L1C9JCN9 74 aa6.71□□□□□ -1.34
SVIP-205ENST00000533774 SPINK1P00995 79 aa6.71□□□□□ -1.34
SVIP-205ENST00000533774 BLOC1S1P78537 153 aa6.71□□□□□ -1.34
SVIP-205ENST00000533774 FAM74A3Q4VXF1 159 aa6.71□□□□□ -1.34
SVIP-205ENST00000533774 AKAP14Q86UN6 197 aa6.71□□□□□ -1.34
SVIP-205ENST00000533774 SMIM7Q9BQ49 75 aa6.71□□□□□ -1.34
SVIP-205ENST00000533774 C2orf88Q9BSF0 95 aa6.71□□□□□ -1.34
SVIP-205ENST00000533774 HIGD2AQ9BW72 106 aa6.71□□□□□ -1.34
SVIP-205ENST00000533774 FCGBPQ9Y6R7 5405 aaPredicted RBP6.7□□□□□ -1.34
SVIP-205ENST00000533774 IGLV8-61A0A075B6I0 122 aa6.7□□□□□ -1.34
SVIP-205ENST00000533774 A0A1B0GVG6 124 aa6.7□□□□□ -1.34
SVIP-205ENST00000533774 M0R2T5 61 aa6.7□□□□□ -1.34
SVIP-205ENST00000533774 Q8NDZ9 215 aa6.7□□□□□ -1.34
SVIP-205ENST00000533774 NAT8BQ9UHF3 227 aa6.7□□□□□ -1.34
SVIP-205ENST00000533774 SMIM1B2RUZ4 78 aa6.69□□□□□ -1.34
SVIP-205ENST00000533774 VPREB1P12018 145 aa6.69□□□□□ -1.34
SVIP-205ENST00000533774 RAB5AP20339 215 aa6.69□□□□□ -1.34
SVIP-205ENST00000533774 CXCL5P42830 114 aa6.69□□□□□ -1.34
SVIP-205ENST00000533774 GNB1LQ9BYB4 327 aa6.69□□□□□ -1.34
SVIP-205ENST00000533774 VCX2Q9H322 139 aa6.69□□□□□ -1.34
SVIP-205ENST00000533774 SMIM27A0A1W2PRY6 76 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms