RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 C2orf82Q6UX34 121 aa13.75□□□□□ -0.21
BEST1-207ENST00000533521 CDKN2A-AS1Q9UH64 79 aa13.75□□□□□ -0.21
BEST1-207ENST00000533521 ODF1Q14990 250 aa13.74□□□□□ -0.21
BEST1-207ENST00000533521 C6orf226Q5I0X4 101 aa13.74□□□□□ -0.21
BEST1-207ENST00000533521 PSORS1C2Q9UIG4 136 aa13.74□□□□□ -0.21
BEST1-207ENST00000533521 TINCRA0A1B0GVN0 87 aa13.73□□□□□ -0.21
BEST1-207ENST00000533521 CKS1BP61024 79 aa13.73□□□□□ -0.21
BEST1-207ENST00000533521 FA2HQ7L5A8 372 aa13.73□□□□□ -0.21
BEST1-207ENST00000533521 IGLV5-45A0A087WSX0 123 aa13.72□□□□□ -0.21
BEST1-207ENST00000533521 PHF5AQ7RTV0 110 aaKnown RBP13.72□□□□□ -0.21
BEST1-207ENST00000533521 SMCO4Q9NRQ5 59 aa13.72□□□□□ -0.21
BEST1-207ENST00000533521 CXCL5P42830 114 aa13.71□□□□□ -0.21
BEST1-207ENST00000533521 GAGE2EQ4V326 116 aa13.7□□□□□ -0.22
BEST1-207ENST00000533521 YPEL4Q96NS1 127 aa13.7□□□□□ -0.22
BEST1-207ENST00000533521 CST9LQ9H4G1 147 aa13.7□□□□□ -0.22
BEST1-207ENST00000533521 TOMM7Q9P0U1 55 aa13.7□□□□□ -0.22
BEST1-207ENST00000533521 GAGE2DQ9UEU5 116 aa13.7□□□□□ -0.22
BEST1-207ENST00000533521 F8VRH5 84 aa13.69□□□□□ -0.22
BEST1-207ENST00000533521 PMVKQ15126 192 aa13.69□□□□□ -0.22
BEST1-207ENST00000533521 PDZD11Q5EBL8 140 aa13.69□□□□□ -0.22
BEST1-207ENST00000533521 FAM168BA1KXE4 195 aa13.68□□□□□ -0.22
BEST1-207ENST00000533521 SMIM1B2RUZ4 78 aa13.67□□□□□ -0.22
BEST1-207ENST00000533521 KRTAP7-1Q8IUC3 87 aa13.67□□□□□ -0.22
BEST1-207ENST00000533521 CBLN2Q8IUK8 224 aa13.67□□□□□ -0.22
BEST1-207ENST00000533521 LINC00469Q8N7U9 141 aa13.67□□□□□ -0.22
BEST1-207ENST00000533521 PLA2G2DQ9UNK4 145 aa13.67□□□□□ -0.22
BEST1-207ENST00000533521 KRTAP10-8P60410 259 aa13.66□□□□□ -0.22
BEST1-207ENST00000533521 C9orf129Q5T035 196 aaKnown RBP13.66□□□□□ -0.22
BEST1-207ENST00000533521 C18orf32Q8TCD1 76 aa13.66□□□□□ -0.22
BEST1-207ENST00000533521 HMCN2Q8NDA2 5059 aa13.66□□□□□ -0.22
BEST1-207ENST00000533521 LINC00614P0C842 121 aa13.65□□□□□ -0.22
BEST1-207ENST00000533521 C1orf137Q5JT78 98 aa13.65□□□□□ -0.22
BEST1-207ENST00000533521 FAM19A5Q7Z5A7 132 aaPredicted RBP13.65□□□□□ -0.22
BEST1-207ENST00000533521 M0QXV9 152 aa13.63□□□□□ -0.23
BEST1-207ENST00000533521 IGLV7-43P04211 117 aa13.63□□□□□ -0.23
BEST1-207ENST00000533521 TNXBP22105 4242 aa13.62□□□□□ -0.23
BEST1-207ENST00000533521 A0A096LNJ9 63 aa13.62□□□□□ -0.23
BEST1-207ENST00000533521 RAB5BP61020 215 aa13.62□□□□□ -0.23
BEST1-207ENST00000533521 COX7B2Q8TF08 81 aa13.61□□□□□ -0.23
BEST1-207ENST00000533521 DIRC1Q969H9 104 aa13.61□□□□□ -0.23
BEST1-207ENST00000533521 URB1-AS1Q96HZ7 61 aa13.61□□□□□ -0.23
BEST1-207ENST00000533521 H3BRM9 83 aa13.6□□□□□ -0.23
BEST1-207ENST00000533521 HBDP02042 147 aa13.6□□□□□ -0.23
BEST1-207ENST00000533521 KRTAP11-1Q8IUC1 163 aa13.6□□□□□ -0.23
BEST1-207ENST00000533521 IGLC3P0DOY3 106 aa13.59□□□□□ -0.23
BEST1-207ENST00000533521 TP73-AS1Q9UF72 201 aa13.58□□□□□ -0.24
BEST1-207ENST00000533521 ATP5LO75964 103 aa13.57□□□□□ -0.24
BEST1-207ENST00000533521 UBE2BP63146 152 aa13.57□□□□□ -0.24
BEST1-207ENST00000533521 LBHQ53QV2 105 aaPredicted RBP13.57□□□□□ -0.24
BEST1-207ENST00000533521 IGLV5-39A0A0G2JS06 123 aa13.55□□□□□ -0.24
BEST1-207ENST00000533521 C22orf24Q9Y442 160 aa13.55□□□□□ -0.24
BEST1-207ENST00000533521 H0Y9J4 135 aa13.54□□□□□ -0.24
BEST1-207ENST00000533521 SPINK8P0C7L1 97 aa13.54□□□□□ -0.24
BEST1-207ENST00000533521 XAGE1AQ9HD64 81 aa13.54□□□□□ -0.24
BEST1-207ENST00000533521 PMCHL1Q16048 86 aa13.53□□□□□ -0.24
BEST1-207ENST00000533521 NUPR1O60356 82 aa13.52□□□□□ -0.25
BEST1-207ENST00000533521 TRGC2P03986 189 aa13.51□□□□□ -0.25
BEST1-207ENST00000533521 ZNF22P17026 224 aaPredicted RBP13.51□□□□□ -0.25
BEST1-207ENST00000533521 CHCHD1Q96BP2 118 aaKnown RBP13.51□□□□□ -0.25
BEST1-207ENST00000533521 NDUFA6P56556 154 aa13.5□□□□□ -0.25
BEST1-207ENST00000533521 SFTA2Q6UW10 78 aa13.5□□□□□ -0.25
BEST1-207ENST00000533521 MRPL55Q7Z7F7 128 aaKnown RBP13.49□□□□□ -0.25
BEST1-207ENST00000533521 IGLV5-37A0A075B6J1 123 aa13.48□□□□□ -0.25
BEST1-207ENST00000533521 COLCA2A8K830 154 aa13.48□□□□□ -0.25
BEST1-207ENST00000533521 BAGE3Q86Y29 109 aa13.47□□□□□ -0.25
BEST1-207ENST00000533521 COX17Q14061 63 aa13.46□□□□□ -0.25
BEST1-207ENST00000533521 IGLV1-50A0A075B6I6 118 aa13.45□□□□□ -0.26
BEST1-207ENST00000533521 ZNF861PO60384 105 aa13.45□□□□□ -0.26
BEST1-207ENST00000533521 TRAV12-1A0A0B4J245 112 aa13.44□□□□□ -0.26
BEST1-207ENST00000533521 C11orf86A6NJI1 115 aa13.44□□□□□ -0.26
BEST1-207ENST00000533521 KRTAP1-4P0C5Y4 121 aa13.43□□□□□ -0.26
BEST1-207ENST00000533521 HSBP1O75506 76 aa13.42□□□□□ -0.26
BEST1-207ENST00000533521 SCO1O75880 301 aa13.42□□□□□ -0.26
BEST1-207ENST00000533521 CHTOPQ9Y3Y2 248 aaKnown RBP13.42□□□□□ -0.26
BEST1-207ENST00000533521 TMEM170BQ5T4T1 132 aa13.41□□□□□ -0.26
BEST1-207ENST00000533521 IFI27L1Q96BM0 104 aa13.41□□□□□ -0.26
BEST1-207ENST00000533521 LINC00167Q96N53 147 aa13.41□□□□□ -0.26
BEST1-207ENST00000533521 BCE1O60756 84 aa13.4□□□□□ -0.26
BEST1-207ENST00000533521 ERG28Q9UKR5 140 aa13.4□□□□□ -0.26
BEST1-207ENST00000533521 FAM19A2Q8N3H0 131 aa13.39□□□□□ -0.27
BEST1-207ENST00000533521 PRR26Q8N8Z3 221 aa13.39□□□□□ -0.27
BEST1-207ENST00000533521 RPL13AP40429 203 aaKnown RBP13.38□□□□□ -0.27
BEST1-207ENST00000533521 RPL28P46779 137 aaKnown RBP13.38□□□□□ -0.27
BEST1-207ENST00000533521 NKAPP1Q8N9T2 125 aa13.38□□□□□ -0.27
BEST1-207ENST00000533521 ZNF625Q96I27 306 aaPredicted RBP13.38□□□□□ -0.27
BEST1-207ENST00000533521 SERF1AO75920 110 aa13.37□□□□□ -0.27
BEST1-207ENST00000533521 PFN2P35080 140 aa13.37□□□□□ -0.27
BEST1-207ENST00000533521 SND1-IT1Q9HBX3 110 aa13.36□□□□□ -0.27
BEST1-207ENST00000533521 TMEM223A0PJW6 202 aa13.35□□□□□ -0.27
BEST1-207ENST00000533521 LINC00310P59036 64 aa13.35□□□□□ -0.27
BEST1-207ENST00000533521 RPL24P83731 157 aaKnown RBP13.34□□□□□ -0.27
BEST1-207ENST00000533521 UBR4Q5T4S7 5183 aa13.34□□□□□ -0.27
BEST1-207ENST00000533521 RPL37AP8A6NKH3 93 aa13.33□□□□□ -0.28
BEST1-207ENST00000533521 VPREB1P12018 145 aa13.33□□□□□ -0.28
BEST1-207ENST00000533521 LEPROTL1O95214 131 aa13.31□□□□□ -0.28
BEST1-207ENST00000533521 GAGE10A6NGK3 116 aa13.3□□□□□ -0.28
BEST1-207ENST00000533521 KRTAP13-1Q8IUC0 172 aa13.3□□□□□ -0.28
BEST1-207ENST00000533521 HERV-K104P63124 156 aa13.27□□□□□ -0.29
BEST1-207ENST00000533521 HSPB8Q9UJY1 196 aa13.27□□□□□ -0.29
BEST1-207ENST00000533521 LINC00587B1AMM8 73 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms