RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 H3BT86 120 aa10.58□□□□□ -0.72
CACNA1E-208ENST00000533229 LINC00337Q8N6G1 96 aa10.58□□□□□ -0.72
CACNA1E-208ENST00000533229 Q8NAQ8 132 aa10.58□□□□□ -0.72
CACNA1E-208ENST00000533229 PFN2P35080 140 aa10.57□□□□□ -0.72
CACNA1E-208ENST00000533229 UBE2WQ96B02 151 aa10.57□□□□□ -0.72
CACNA1E-208ENST00000533229 C11orf68Q9H3H3 251 aaKnown RBP10.57□□□□□ -0.72
CACNA1E-208ENST00000533229 SND1-IT1Q9HBX3 110 aa10.57□□□□□ -0.72
CACNA1E-208ENST00000533229 IBA57-AS1B1ANH7 110 aa10.56□□□□□ -0.72
CACNA1E-208ENST00000533229 CCL18P55774 89 aa10.56□□□□□ -0.72
CACNA1E-208ENST00000533229 DAD1P61803 113 aa10.56□□□□□ -0.72
CACNA1E-208ENST00000533229 SS18Q15532 418 aa10.56□□□□□ -0.72
CACNA1E-208ENST00000533229 C6orf226Q5I0X4 101 aa10.55□□□□□ -0.72
CACNA1E-208ENST00000533229 LINC00269Q8N2A0 174 aa10.55□□□□□ -0.72
CACNA1E-208ENST00000533229 WFDC9Q8NEX5 89 aa10.55□□□□□ -0.72
CACNA1E-208ENST00000533229 FAM218AQ96MZ4 157 aa10.55□□□□□ -0.72
CACNA1E-208ENST00000533229 TRAV8-4A0A0B4J246 113 aa10.55□□□□□ -0.72
CACNA1E-208ENST00000533229 IGHV4-30-4P0DP06 118 aa10.54□□□□□ -0.72
CACNA1E-208ENST00000533229 ANAPC13Q9BS18 74 aa10.54□□□□□ -0.72
CACNA1E-208ENST00000533229 TRAV13-2A0A0B4J235 113 aa10.53□□□□□ -0.72
CACNA1E-208ENST00000533229 NHLRC4P0CG21 123 aaPredicted RBP10.53□□□□□ -0.72
CACNA1E-208ENST00000533229 CYSRT1A8MQ03 144 aa10.52□□□□□ -0.72
CACNA1E-208ENST00000533229 CRPP02741 224 aa10.52□□□□□ -0.72
CACNA1E-208ENST00000533229 ATP5G1P05496 136 aa10.52□□□□□ -0.72
CACNA1E-208ENST00000533229 MIFP14174 115 aa10.52□□□□□ -0.72
CACNA1E-208ENST00000533229 IGLV10-54A0A075B6I4 117 aa10.52□□□□□ -0.73
CACNA1E-208ENST00000533229 SNCGO76070 127 aa10.52□□□□□ -0.73
CACNA1E-208ENST00000533229 RPL28P46779 137 aaKnown RBP10.52□□□□□ -0.73
CACNA1E-208ENST00000533229 Q8IZM0 81 aa10.51□□□□□ -0.73
CACNA1E-208ENST00000533229 ANGP03950 147 aaKnown RBP10.51□□□□□ -0.73
CACNA1E-208ENST00000533229 HTN3P15516 51 aa10.51□□□□□ -0.73
CACNA1E-208ENST00000533229 C15orf53Q8NAA6 179 aa10.51□□□□□ -0.73
CACNA1E-208ENST00000533229 WIPF1O43516 503 aa10.5□□□□□ -0.73
CACNA1E-208ENST00000533229 REG3AQ06141 175 aa10.5□□□□□ -0.73
CACNA1E-208ENST00000533229 GAGE2BQ13066 116 aa10.5□□□□□ -0.73
CACNA1E-208ENST00000533229 GAGE2EQ4V326 116 aa10.5□□□□□ -0.73
CACNA1E-208ENST00000533229 SMIM11BQ8TCY0 68 aa10.5□□□□□ -0.73
CACNA1E-208ENST00000533229 CHCHD10Q8WYQ3 142 aaPredicted RBP10.5□□□□□ -0.73
CACNA1E-208ENST00000533229 GAGE2DQ9UEU5 116 aa10.5□□□□□ -0.73
CACNA1E-208ENST00000533229 SPART-AS1P0CW21 52 aa10.49□□□□□ -0.73
CACNA1E-208ENST00000533229 KIAA0087Q14695 138 aa10.49□□□□□ -0.73
CACNA1E-208ENST00000533229 CD164L2Q6UWJ8 174 aa10.49□□□□□ -0.73
CACNA1E-208ENST00000533229 TRACP01848 142 aa10.49□□□□□ -0.73
CACNA1E-208ENST00000533229 TTC32Q5I0X7 151 aa10.49□□□□□ -0.73
CACNA1E-208ENST00000533229 DEFB121Q5J5C9 76 aa10.49□□□□□ -0.73
CACNA1E-208ENST00000533229 C22orf24Q9Y442 160 aa10.49□□□□□ -0.73
CACNA1E-208ENST00000533229 NDUFV3P56181 108 aaKnown RBP10.48□□□□□ -0.73
CACNA1E-208ENST00000533229 LINC01561Q8N1V8 128 aa10.47□□□□□ -0.73
CACNA1E-208ENST00000533229 Q9HAA7 133 aa10.47□□□□□ -0.73
CACNA1E-208ENST00000533229 ANK2Q01484 3957 aa10.47□□□□□ -0.73
CACNA1E-208ENST00000533229 MRPL23Q16540 153 aaKnown RBP10.46□□□□□ -0.73
CACNA1E-208ENST00000533229 OXLD1Q5BKU9 147 aa10.46□□□□□ -0.73
CACNA1E-208ENST00000533229 BAALC-AS2P0C853 105 aa10.46□□□□□ -0.74
CACNA1E-208ENST00000533229 A0A087WYN8 130 aa10.45□□□□□ -0.74
CACNA1E-208ENST00000533229 PRR3P79522 188 aaKnown RBP10.44□□□□□ -0.74
CACNA1E-208ENST00000533229 C9orf116Q5BN46 136 aaPredicted RBP10.44□□□□□ -0.74
CACNA1E-208ENST00000533229 LELP1Q5T871 98 aa10.44□□□□□ -0.74
CACNA1E-208ENST00000533229 KRTAP10-11P60412 298 aa10.43□□□□□ -0.74
CACNA1E-208ENST00000533229 OR13C6PQ8NH95 151 aa10.43□□□□□ -0.74
CACNA1E-208ENST00000533229 MALP21145 153 aa10.43□□□□□ -0.74
CACNA1E-208ENST00000533229 Q6Q795 121 aa10.43□□□□□ -0.74
CACNA1E-208ENST00000533229 CCDC179H3BU77 68 aa10.42□□□□□ -0.74
CACNA1E-208ENST00000533229 RETNQ9HD89 108 aa10.42□□□□□ -0.74
CACNA1E-208ENST00000533229 SS18L2Q9UHA2 77 aa10.42□□□□□ -0.74
CACNA1E-208ENST00000533229 CFAP161Q6P656 301 aa10.42□□□□□ -0.74
CACNA1E-208ENST00000533229 FAM240AA0A1B0GVK7 77 aa10.41□□□□□ -0.74
CACNA1E-208ENST00000533229 B5MCH6 92 aa10.41□□□□□ -0.74
CACNA1E-208ENST00000533229 KLK12Q9UKR0 248 aa10.41□□□□□ -0.74
CACNA1E-208ENST00000533229 F8P00451 2351 aa10.4□□□□□ -0.74
CACNA1E-208ENST00000533229 C6orf223Q8N319 242 aa10.4□□□□□ -0.74
CACNA1E-208ENST00000533229 C10orf25Q5T742 122 aa10.4□□□□□ -0.74
CACNA1E-208ENST00000533229 LYPD5Q6UWN5 251 aa10.4□□□□□ -0.74
CACNA1E-208ENST00000533229 LINC00526Q96FQ7 95 aa10.4□□□□□ -0.74
CACNA1E-208ENST00000533229 PRR34Q9NV39 138 aa10.4□□□□□ -0.74
CACNA1E-208ENST00000533229 FBN1P35555 2871 aaKnown RBP10.4□□□□□ -0.75
CACNA1E-208ENST00000533229 CXCL5P42830 114 aa10.39□□□□□ -0.75
CACNA1E-208ENST00000533229 NANOS2P60321 138 aaKnown RBP10.39□□□□□ -0.75
CACNA1E-208ENST00000533229 ENHOQ6UWT2 76 aa10.39□□□□□ -0.75
CACNA1E-208ENST00000533229 Q8NDZ9 215 aa10.39□□□□□ -0.75
CACNA1E-208ENST00000533229 H0YGX0 51 aa10.39□□□□□ -0.75
CACNA1E-208ENST00000533229 COX17Q14061 63 aa10.39□□□□□ -0.75
CACNA1E-208ENST00000533229 C9orf129Q5T035 196 aaKnown RBP10.38□□□□□ -0.75
CACNA1E-208ENST00000533229 UNQ6190/PRO20217Q6UXQ8 127 aa10.37□□□□□ -0.75
CACNA1E-208ENST00000533229 SMCR5Q8TEV8 140 aa10.37□□□□□ -0.75
CACNA1E-208ENST00000533229 PKD1L1Q8TDX9 2849 aa10.37□□□□□ -0.75
CACNA1E-208ENST00000533229 LECT2O14960 151 aa10.37□□□□□ -0.75
CACNA1E-208ENST00000533229 KLK5Q9Y337 293 aaPredicted RBP10.37□□□□□ -0.75
CACNA1E-208ENST00000533229 KRTAP24-1Q3LI83 254 aa10.36□□□□□ -0.75
CACNA1E-208ENST00000533229 DNAL4O96015 105 aa10.36□□□□□ -0.75
CACNA1E-208ENST00000533229 SPAG11BQ08648 103 aa10.36□□□□□ -0.75
CACNA1E-208ENST00000533229 SLPIP03973 132 aa10.35□□□□□ -0.75
CACNA1E-208ENST00000533229 CMYA5Q8N3K9 4069 aa10.35□□□□□ -0.75
CACNA1E-208ENST00000533229 NDUFC2O95298 119 aa10.34□□□□□ -0.75
CACNA1E-208ENST00000533229 Q6ZTC4 211 aa10.34□□□□□ -0.75
CACNA1E-208ENST00000533229 TRBV7-7A0A0K0K1E9 115 aa10.34□□□□□ -0.75
CACNA1E-208ENST00000533229 KPRPQ5T749 579 aaPredicted RBP10.33□□□□□ -0.76
CACNA1E-208ENST00000533229 WFDC10BQ8IUB3 73 aa10.33□□□□□ -0.76
CACNA1E-208ENST00000533229 STAB1Q9NY15 2570 aa10.32□□□□□ -0.76
CACNA1E-208ENST00000533229 EGFEM1PQ0D2K5 195 aa10.32□□□□□ -0.76
CACNA1E-208ENST00000533229 A0A0J9YWU9 116 aa10.31□□□□□ -0.76
CACNA1E-208ENST00000533229 NCR3O14931 201 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms