RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 IGHV3-30P01768 117 aa12.54□□□□□ -0.4
SMPD1-208ENST00000533123 IGHV3-33P01772 117 aa12.54□□□□□ -0.4
SMPD1-208ENST00000533123 ANGP03950 147 aaKnown RBP12.54□□□□□ -0.4
SMPD1-208ENST00000533123 IGHV3-30-5P0DP03 117 aa12.54□□□□□ -0.4
SMPD1-208ENST00000533123 PSMB2P49721 201 aa12.54□□□□□ -0.4
SMPD1-208ENST00000533123 ARL17AQ8IVW1 177 aa12.54□□□□□ -0.4
SMPD1-208ENST00000533123 A0A0J9YXY3 114 aa12.53□□□□□ -0.4
SMPD1-208ENST00000533123 UBE2DNLQ8IWF7 75 aa12.53□□□□□ -0.4
SMPD1-208ENST00000533123 IGHV3OR16-9A0A0B4J2B5 98 aa12.53□□□□□ -0.4
SMPD1-208ENST00000533123 CDIP1Q9H305 208 aa12.53□□□□□ -0.4
SMPD1-208ENST00000533123 XCL1P47992 114 aa12.52□□□□□ -0.41
SMPD1-208ENST00000533123 UPK3BQ9BT76 320 aa12.52□□□□□ -0.41
SMPD1-208ENST00000533123 C5orf38Q86SI9 138 aa12.51□□□□□ -0.41
SMPD1-208ENST00000533123 DNAH1Q9P2D7 4330 aa12.5□□□□□ -0.41
SMPD1-208ENST00000533123 C3orf84H3BNL1 204 aa12.5□□□□□ -0.41
SMPD1-208ENST00000533123 REG3AQ06141 175 aa12.5□□□□□ -0.41
SMPD1-208ENST00000533123 SS18Q15532 418 aa12.5□□□□□ -0.41
SMPD1-208ENST00000533123 Q9H8V8 135 aa12.5□□□□□ -0.41
SMPD1-208ENST00000533123 NDUFA1O15239 70 aa12.49□□□□□ -0.41
SMPD1-208ENST00000533123 CFC1BP0CG36 223 aa12.49□□□□□ -0.41
SMPD1-208ENST00000533123 CFC1P0CG37 223 aa12.49□□□□□ -0.41
SMPD1-208ENST00000533123 CKS1BP61024 79 aa12.49□□□□□ -0.41
SMPD1-208ENST00000533123 IGLV10-54A0A075B6I4 117 aa12.49□□□□□ -0.41
SMPD1-208ENST00000533123 TCL1BO95988 128 aa12.49□□□□□ -0.41
SMPD1-208ENST00000533123 DNAH10OSP0CZ25 163 aa12.49□□□□□ -0.41
SMPD1-208ENST00000533123 LINC01556Q5JQF7 62 aa12.49□□□□□ -0.41
SMPD1-208ENST00000533123 LYRM7Q5U5X0 104 aa12.49□□□□□ -0.41
SMPD1-208ENST00000533123 KLK12Q9UKR0 248 aa12.49□□□□□ -0.41
SMPD1-208ENST00000533123 CARD19Q96LW7 228 aa12.48□□□□□ -0.41
SMPD1-208ENST00000533123 LITAFQ99732 161 aa12.48□□□□□ -0.41
SMPD1-208ENST00000533123 A0A087WZ39 114 aa12.47□□□□□ -0.41
SMPD1-208ENST00000533123 VPS13DQ5THJ4 4388 aa12.47□□□□□ -0.41
SMPD1-208ENST00000533123 ADAMTSL4-AS1Q5T5F5 129 aa12.47□□□□□ -0.41
SMPD1-208ENST00000533123 TEN1Q86WV5 123 aa12.47□□□□□ -0.41
SMPD1-208ENST00000533123 ZNF625Q96I27 306 aaPredicted RBP12.47□□□□□ -0.41
SMPD1-208ENST00000533123 TRBV20-1A0A075B6N2 111 aa12.46□□□□□ -0.41
SMPD1-208ENST00000533123 PPDPFLQ8WWR9 84 aa12.46□□□□□ -0.41
SMPD1-208ENST00000533123 TOMM7Q9P0U1 55 aa12.46□□□□□ -0.42
SMPD1-208ENST00000533123 CHCHD10Q8WYQ3 142 aaPredicted RBP12.45□□□□□ -0.42
SMPD1-208ENST00000533123 MT-ATP8P03928 68 aa12.45□□□□□ -0.42
SMPD1-208ENST00000533123 XGP55808 180 aa12.44□□□□□ -0.42
SMPD1-208ENST00000533123 COX7B2Q8TF08 81 aa12.44□□□□□ -0.42
SMPD1-208ENST00000533123 PRO1854Q9UHT4 67 aa12.43□□□□□ -0.42
SMPD1-208ENST00000533123 UBE2WQ96B02 151 aa12.43□□□□□ -0.42
SMPD1-208ENST00000533123 ENHOQ6UWT2 76 aa12.42□□□□□ -0.42
SMPD1-208ENST00000533123 MUSTN1Q8IVN3 82 aa12.42□□□□□ -0.42
SMPD1-208ENST00000533123 DAND5Q8N907 189 aa12.42□□□□□ -0.42
SMPD1-208ENST00000533123 PRR34Q9NV39 138 aa12.42□□□□□ -0.42
SMPD1-208ENST00000533123 CD164L2Q6UWJ8 174 aa12.42□□□□□ -0.42
SMPD1-208ENST00000533123 NPC2P61916 151 aa12.41□□□□□ -0.42
SMPD1-208ENST00000533123 A0A0U1RRA0 63 aa12.41□□□□□ -0.42
SMPD1-208ENST00000533123 EIF4EBP3O60516 100 aaPredicted RBP12.41□□□□□ -0.42
SMPD1-208ENST00000533123 CRPP02741 224 aa12.41□□□□□ -0.42
SMPD1-208ENST00000533123 PRSS2P07478 247 aa12.4□□□□□ -0.42
SMPD1-208ENST00000533123 ANKRD29Q8N6D5 301 aa12.4□□□□□ -0.42
SMPD1-208ENST00000533123 A4D1N5 150 aa12.39□□□□□ -0.43
SMPD1-208ENST00000533123 SCGB1C2P0DMR2 95 aa12.39□□□□□ -0.43
SMPD1-208ENST00000533123 MIAQ16674 131 aa12.39□□□□□ -0.43
SMPD1-208ENST00000533123 SPANXDQ9BXN6 97 aa12.39□□□□□ -0.43
SMPD1-208ENST00000533123 SPANXCQ9NY87 97 aa12.39□□□□□ -0.43
SMPD1-208ENST00000533123 KMT2AQ03164 3969 aa12.39□□□□□ -0.43
SMPD1-208ENST00000533123 COX7A2LO14548 114 aa12.39□□□□□ -0.43
SMPD1-208ENST00000533123 LY6G6CO95867 125 aa12.39□□□□□ -0.43
SMPD1-208ENST00000533123 KRTAP1-5Q9BYS1 174 aa12.39□□□□□ -0.43
SMPD1-208ENST00000533123 TIMM17BO60830 172 aa12.38□□□□□ -0.43
SMPD1-208ENST00000533123 MEIG1Q5JSS6 88 aa12.38□□□□□ -0.43
SMPD1-208ENST00000533123 Q9HAA7 133 aa12.37□□□□□ -0.43
SMPD1-208ENST00000533123 IBA57-AS1B1ANH7 110 aa12.37□□□□□ -0.43
SMPD1-208ENST00000533123 LINC00476Q8WZB0 136 aa12.37□□□□□ -0.43
SMPD1-208ENST00000533123 HERV-K104P63124 156 aa12.36□□□□□ -0.43
SMPD1-208ENST00000533123 CIRBPQ14011 172 aaKnown RBP12.36□□□□□ -0.43
SMPD1-208ENST00000533123 SLC25A20O43772 301 aa12.35□□□□□ -0.43
SMPD1-208ENST00000533123 A0A0B4J2C4 111 aa12.35□□□□□ -0.43
SMPD1-208ENST00000533123 M0QXV9 152 aa12.35□□□□□ -0.43
SMPD1-208ENST00000533123 MALP21145 153 aa12.35□□□□□ -0.43
SMPD1-208ENST00000533123 NBDYA0A0U1RRE5 68 aa12.34□□□□□ -0.43
SMPD1-208ENST00000533123 C6orf226Q5I0X4 101 aa12.34□□□□□ -0.43
SMPD1-208ENST00000533123 LINC01561Q8N1V8 128 aa12.34□□□□□ -0.43
SMPD1-208ENST00000533123 C9JAW5 83 aa12.34□□□□□ -0.43
SMPD1-208ENST00000533123 C2orf82Q6UX34 121 aa12.34□□□□□ -0.43
SMPD1-208ENST00000533123 Q8IZM0 81 aa12.34□□□□□ -0.43
SMPD1-208ENST00000533123 ERG28Q9UKR5 140 aa12.34□□□□□ -0.43
SMPD1-208ENST00000533123 TRAV8-4A0A0B4J246 113 aa12.33□□□□□ -0.44
SMPD1-208ENST00000533123 M0R2N4 97 aa12.33□□□□□ -0.44
SMPD1-208ENST00000533123 ALMS1Q8TCU4 4167 aa12.32□□□□□ -0.44
SMPD1-208ENST00000533123 IGKV2D-24A0A075B6R9 120 aa12.31□□□□□ -0.44
SMPD1-208ENST00000533123 H7C2G1 150 aa12.31□□□□□ -0.44
SMPD1-208ENST00000533123 KIAA0087Q14695 138 aa12.31□□□□□ -0.44
SMPD1-208ENST00000533123 SOSTDC1Q6X4U4 206 aa12.31□□□□□ -0.44
SMPD1-208ENST00000533123 LINC00308Q8TCZ7 52 aa12.31□□□□□ -0.44
SMPD1-208ENST00000533123 C1orf43Q9BWL3 253 aa12.31□□□□□ -0.44
SMPD1-208ENST00000533123 DNAH10Q8IVF4 4471 aa12.31□□□□□ -0.44
SMPD1-208ENST00000533123 TTC32Q5I0X7 151 aa12.3□□□□□ -0.44
SMPD1-208ENST00000533123 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.3□□□□□ -0.44
SMPD1-208ENST00000533123 IFITM1P13164 125 aa12.3□□□□□ -0.44
SMPD1-208ENST00000533123 KRTAP26-1Q6PEX3 210 aa12.29□□□□□ -0.44
SMPD1-208ENST00000533123 PFN2P35080 140 aa12.29□□□□□ -0.44
SMPD1-208ENST00000533123 LINC00526Q96FQ7 95 aa12.29□□□□□ -0.44
SMPD1-208ENST00000533123 LINC00158P58513 81 aa12.27□□□□□ -0.44
SMPD1-208ENST00000533123 ATXN8Q156A1 80 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms