RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 PRAC1Q96KF2 57 aa3.18□□□□□ -1.9
ECHDC1-221ENST00000531582 WFDC10AQ9H1F0 79 aa3.18□□□□□ -1.9
ECHDC1-221ENST00000531582 KCNQ1DNQ9H478 68 aa3.18□□□□□ -1.9
ECHDC1-221ENST00000531582 SPTBN4Q9H254 2564 aa3.18□□□□□ -1.9
ECHDC1-221ENST00000531582 SDK2Q58EX2 2172 aa3.18□□□□□ -1.9
ECHDC1-221ENST00000531582 F5P12259 2224 aa3.17□□□□□ -1.9
ECHDC1-221ENST00000531582 IGHV3-64A0A075B6Q5 118 aa3.17□□□□□ -1.9
ECHDC1-221ENST00000531582 IGHV3OR16-8A0A075B7F1 116 aa3.17□□□□□ -1.9
ECHDC1-221ENST00000531582 IGHV7-81A0A0B4J1V7 117 aa3.17□□□□□ -1.9
ECHDC1-221ENST00000531582 IGHV3-43A0A0B4J1X8 118 aa3.17□□□□□ -1.9
ECHDC1-221ENST00000531582 K7EQD1 137 aa3.17□□□□□ -1.9
ECHDC1-221ENST00000531582 NDUFA4O00483 81 aa3.17□□□□□ -1.9
ECHDC1-221ENST00000531582 IGHV3-53P01767 116 aa3.17□□□□□ -1.9
ECHDC1-221ENST00000531582 IGHV4-38-2P0DP08 117 aa3.17□□□□□ -1.9
ECHDC1-221ENST00000531582 RPL39P5Q59GN2 51 aa3.17□□□□□ -1.9
ECHDC1-221ENST00000531582 RNASE13Q5GAN3 156 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-221ENST00000531582 ZNF318Q5VUA4 2279 aa3.17□□□□□ -1.9
ECHDC1-221ENST00000531582 RTTNQ86VV8 2226 aa3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 SMG1Q96Q15 3661 aaKnown RBP3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 TRGV2A0A075B6R0 118 aa3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 A0A087WSZ3 146 aa3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 IGKV2-40A0A087WW87 121 aaPredicted RBP3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 IGKV3D-11A0A0A0MRZ8 115 aa3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 IGHV1-3A0A0C4DH29 117 aa3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 IGHV3-20A0A0C4DH32 117 aa3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 IGHV3-38A0A0C4DH36 116 aa3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 LINC01565O15544 149 aa3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 IGKV2D-40P01614 121 aaPredicted RBP3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 MGPP08493 103 aa3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 CGB3P0DN86 165 aa3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 CGB7P0DN87 165 aa3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 REG3AQ06141 175 aa3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 SPAG11BQ08648 103 aa3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 SPAG11AQ6PDA7 123 aa3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 Q6ZTI0 123 aa3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 Q8NDZ9 215 aa3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 KRTAP9-8Q9BYQ0 159 aa3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 DEFB126Q9BYW3 111 aa3.16□□□□□ -1.9
ECHDC1-221ENST00000531582 ZDBF2Q9HCK1 2354 aa3.15□□□□□ -1.9
ECHDC1-221ENST00000531582 LAMA1P25391 3075 aa3.15□□□□□ -1.9
ECHDC1-221ENST00000531582 IGKV2-28A0A075B6P5 120 aa3.15□□□□□ -1.91
ECHDC1-221ENST00000531582 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.15□□□□□ -1.91
ECHDC1-221ENST00000531582 IGHV3-15A0A0B4J1V0 119 aa3.15□□□□□ -1.91
ECHDC1-221ENST00000531582 A0A1W2PNM2 257 aa3.15□□□□□ -1.91
ECHDC1-221ENST00000531582 SRRM5B3KS81 715 aa3.15□□□□□ -1.91
ECHDC1-221ENST00000531582 IGKV2D-28P01615 120 aa3.15□□□□□ -1.91
ECHDC1-221ENST00000531582 LINC00315P59091 139 aa3.15□□□□□ -1.91
ECHDC1-221ENST00000531582 SMIM29Q86T20 159 aa3.15□□□□□ -1.91
ECHDC1-221ENST00000531582 Q8NAQ8 132 aa3.15□□□□□ -1.91
ECHDC1-221ENST00000531582 NPBQ8NG41 125 aa3.15□□□□□ -1.91
ECHDC1-221ENST00000531582 SVILO95425 2214 aa3.15□□□□□ -1.91
ECHDC1-221ENST00000531582 CELSR3Q9NYQ7 3312 aa3.14□□□□□ -1.91
ECHDC1-221ENST00000531582 PTPRZ1P23471 2315 aaPredicted RBP3.14□□□□□ -1.91
ECHDC1-221ENST00000531582 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.14□□□□□ -1.91
ECHDC1-221ENST00000531582 IGHV3-74A0A0B4J1X5 117 aa3.14□□□□□ -1.91
ECHDC1-221ENST00000531582 TRBV6-4A0A1B0GX49 114 aa3.14□□□□□ -1.91
ECHDC1-221ENST00000531582 DEFB108AA8MXU0 73 aa3.14□□□□□ -1.91
ECHDC1-221ENST00000531582 H0Y9P7 68 aa3.14□□□□□ -1.91
ECHDC1-221ENST00000531582 I3L2K1 104 aa3.14□□□□□ -1.91
ECHDC1-221ENST00000531582 IGKV1-17P01599 117 aa3.14□□□□□ -1.91
ECHDC1-221ENST00000531582 IGKV3-20P01619 116 aa3.14□□□□□ -1.91
ECHDC1-221ENST00000531582 IGKV3-15P01624 115 aa3.14□□□□□ -1.91
ECHDC1-221ENST00000531582 IGHV3-11P01762 117 aa3.14□□□□□ -1.91
ECHDC1-221ENST00000531582 IGHV4-59P01825 116 aa3.14□□□□□ -1.91
ECHDC1-221ENST00000531582 COX7BP24311 80 aa3.14□□□□□ -1.91
ECHDC1-221ENST00000531582 GAFA1Q96PS6 74 aa3.14□□□□□ -1.91
ECHDC1-221ENST00000531582 RIF1Q5UIP0 2472 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-221ENST00000531582 SEC16AO15027 2179 aa3.14□□□□□ -1.91
ECHDC1-221ENST00000531582 TECTAO75443 2155 aa3.14□□□□□ -1.91
ECHDC1-221ENST00000531582 CACNA1HO95180 2353 aa3.14□□□□□ -1.91
ECHDC1-221ENST00000531582 CLPSL1A2RUU4 121 aa3.13□□□□□ -1.91
ECHDC1-221ENST00000531582 IGLV1-47P01700 117 aa3.13□□□□□ -1.91
ECHDC1-221ENST00000531582 IGHV3-23P01764 117 aa3.13□□□□□ -1.91
ECHDC1-221ENST00000531582 TFF1P04155 84 aa3.13□□□□□ -1.91
ECHDC1-221ENST00000531582 MIR22HGQ0VDD5 57 aa3.13□□□□□ -1.91
ECHDC1-221ENST00000531582 Q8TAT8 98 aa3.13□□□□□ -1.91
ECHDC1-221ENST00000531582 ZFHX2Q9C0A1 2572 aaPredicted RBP3.13□□□□□ -1.91
ECHDC1-221ENST00000531582 LOC400499M0QZD8 3231 aa3.12□□□□□ -1.91
ECHDC1-221ENST00000531582 IGLV4-60A0A075B6I1 120 aa3.12□□□□□ -1.91
ECHDC1-221ENST00000531582 IGLV7-46A0A075B6I9 117 aa3.12□□□□□ -1.91
ECHDC1-221ENST00000531582 IGHV3-21A0A0B4J1V1 117 aa3.12□□□□□ -1.91
ECHDC1-221ENST00000531582 SMIM1B2RUZ4 78 aa3.12□□□□□ -1.91
ECHDC1-221ENST00000531582 K7ERS5 55 aa3.12□□□□□ -1.91
ECHDC1-221ENST00000531582 CHTF8P0CG12 524 aa3.12□□□□□ -1.91
ECHDC1-221ENST00000531582 COX7A1P24310 79 aa3.12□□□□□ -1.91
ECHDC1-221ENST00000531582 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.12□□□□□ -1.91
ECHDC1-221ENST00000531582 RNF5Q99942 180 aa3.12□□□□□ -1.91
ECHDC1-221ENST00000531582 TTTY12Q9BZ98 90 aa3.12□□□□□ -1.91
ECHDC1-221ENST00000531582 FAM186AA6NE01 2351 aa3.11□□□□□ -1.91
ECHDC1-221ENST00000531582 IGHV4-61A0A0C4DH41 118 aa3.11□□□□□ -1.91
ECHDC1-221ENST00000531582 M0QY20 66 aa3.11□□□□□ -1.91
ECHDC1-221ENST00000531582 IGLV1-44P01699 117 aa3.11□□□□□ -1.91
ECHDC1-221ENST00000531582 IGLV2-23P01705 113 aa3.11□□□□□ -1.91
ECHDC1-221ENST00000531582 IGHV1-8P0DP01 117 aa3.11□□□□□ -1.91
ECHDC1-221ENST00000531582 C17orf58Q2M2W7 97 aa3.11□□□□□ -1.91
ECHDC1-221ENST00000531582 CSAG1Q6PB30 78 aa3.11□□□□□ -1.91
ECHDC1-221ENST00000531582 SPATA8Q6RVD6 105 aa3.11□□□□□ -1.91
ECHDC1-221ENST00000531582 REG3GQ6UW15 175 aa3.11□□□□□ -1.91
ECHDC1-221ENST00000531582 COA5Q86WW8 74 aa3.11□□□□□ -1.91
ECHDC1-221ENST00000531582 CSNK1G2-AS1Q8NCQ2 148 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms