RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 LINC00173Q6ZV60 143 aa13.67□□□□□ -0.22
TRAPPC4-210ENST00000531290 RAB5BP61020 215 aa13.66□□□□□ -0.22
TRAPPC4-210ENST00000531290 HERVK_113P63121 156 aa13.66□□□□□ -0.22
TRAPPC4-210ENST00000531290 GAGE2EQ4V326 116 aa13.66□□□□□ -0.22
TRAPPC4-210ENST00000531290 LINC01561Q8N1V8 128 aa13.66□□□□□ -0.22
TRAPPC4-210ENST00000531290 GAGE2DQ9UEU5 116 aa13.66□□□□□ -0.22
TRAPPC4-210ENST00000531290 LINC00614P0C842 121 aa13.65□□□□□ -0.22
TRAPPC4-210ENST00000531290 KIAA0087Q14695 138 aa13.65□□□□□ -0.22
TRAPPC4-210ENST00000531290 SLC7A5P1Q8MH63 180 aa13.65□□□□□ -0.22
TRAPPC4-210ENST00000531290 LRP2P98164 4655 aa13.65□□□□□ -0.22
TRAPPC4-210ENST00000531290 FAM168BA1KXE4 195 aa13.64□□□□□ -0.23
TRAPPC4-210ENST00000531290 PRSS2P07478 247 aa13.64□□□□□ -0.23
TRAPPC4-210ENST00000531290 C18orf32Q8TCD1 76 aa13.64□□□□□ -0.23
TRAPPC4-210ENST00000531290 PACRGQ96M98 296 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC4-210ENST00000531290 FAM19A5Q7Z5A7 132 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-210ENST00000531290 FAM19A3Q7Z5A8 133 aa13.63□□□□□ -0.23
TRAPPC4-210ENST00000531290 TRBV30A0A0K0K1B3 111 aa13.62□□□□□ -0.23
TRAPPC4-210ENST00000531290 IGLV7-43P04211 117 aa13.61□□□□□ -0.23
TRAPPC4-210ENST00000531290 C2orf82Q6UX34 121 aa13.61□□□□□ -0.23
TRAPPC4-210ENST00000531290 DIRC1Q969H9 104 aa13.61□□□□□ -0.23
TRAPPC4-210ENST00000531290 PMVKQ15126 192 aa13.6□□□□□ -0.23
TRAPPC4-210ENST00000531290 CBLN2Q8IUK8 224 aa13.6□□□□□ -0.23
TRAPPC4-210ENST00000531290 YPEL4Q96NS1 127 aa13.6□□□□□ -0.23
TRAPPC4-210ENST00000531290 CST9LQ9H4G1 147 aa13.6□□□□□ -0.23
TRAPPC4-210ENST00000531290 TOMM7Q9P0U1 55 aa13.6□□□□□ -0.23
TRAPPC4-210ENST00000531290 NDUFC2-KCTD14E9PQ53 114 aa13.59□□□□□ -0.23
TRAPPC4-210ENST00000531290 CKS1BP61024 79 aa13.59□□□□□ -0.23
TRAPPC4-210ENST00000531290 C6orf226Q5I0X4 101 aa13.59□□□□□ -0.23
TRAPPC4-210ENST00000531290 HBDP02042 147 aa13.58□□□□□ -0.24
TRAPPC4-210ENST00000531290 NDUFA6P56556 154 aa13.58□□□□□ -0.24
TRAPPC4-210ENST00000531290 LINC00469Q8N7U9 141 aa13.58□□□□□ -0.24
TRAPPC4-210ENST00000531290 CDKN2A-AS1Q9UH64 79 aa13.58□□□□□ -0.24
TRAPPC4-210ENST00000531290 TINCRA0A1B0GVN0 87 aa13.57□□□□□ -0.24
TRAPPC4-210ENST00000531290 UBE2BP63146 152 aa13.57□□□□□ -0.24
TRAPPC4-210ENST00000531290 M0QXV9 152 aa13.56□□□□□ -0.24
TRAPPC4-210ENST00000531290 KRTAP11-1Q8IUC1 163 aa13.56□□□□□ -0.24
TRAPPC4-210ENST00000531290 Q8IZM0 81 aa13.55□□□□□ -0.24
TRAPPC4-210ENST00000531290 ATP5LO75964 103 aa13.54□□□□□ -0.24
TRAPPC4-210ENST00000531290 PMCHL1Q16048 86 aa13.54□□□□□ -0.24
TRAPPC4-210ENST00000531290 KRTAP7-1Q8IUC3 87 aa13.54□□□□□ -0.24
TRAPPC4-210ENST00000531290 URB1-AS1Q96HZ7 61 aa13.54□□□□□ -0.24
TRAPPC4-210ENST00000531290 H0Y9J4 135 aa13.53□□□□□ -0.24
TRAPPC4-210ENST00000531290 CHCHD1Q96BP2 118 aaKnown RBP13.53□□□□□ -0.24
TRAPPC4-210ENST00000531290 H3BRM9 83 aa13.52□□□□□ -0.25
TRAPPC4-210ENST00000531290 C9orf129Q5T035 196 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-210ENST00000531290 PRR26Q8N8Z3 221 aa13.52□□□□□ -0.25
TRAPPC4-210ENST00000531290 RNF213Q63HN8 5207 aa13.51□□□□□ -0.25
TRAPPC4-210ENST00000531290 A0A096LNJ9 63 aa13.51□□□□□ -0.25
TRAPPC4-210ENST00000531290 BAGE3Q86Y29 109 aa13.51□□□□□ -0.25
TRAPPC4-210ENST00000531290 PDZD11Q5EBL8 140 aa13.5□□□□□ -0.25
TRAPPC4-210ENST00000531290 CXCL5P42830 114 aa13.49□□□□□ -0.25
TRAPPC4-210ENST00000531290 IGLV5-45A0A087WSX0 123 aa13.48□□□□□ -0.25
TRAPPC4-210ENST00000531290 TRGC2P03986 189 aa13.48□□□□□ -0.25
TRAPPC4-210ENST00000531290 SMIM1B2RUZ4 78 aa13.47□□□□□ -0.25
TRAPPC4-210ENST00000531290 F8VRH5 84 aa13.47□□□□□ -0.25
TRAPPC4-210ENST00000531290 HSBP1O75506 76 aa13.47□□□□□ -0.25
TRAPPC4-210ENST00000531290 COX7B2Q8TF08 81 aa13.47□□□□□ -0.25
TRAPPC4-210ENST00000531290 SPINK8P0C7L1 97 aa13.46□□□□□ -0.25
TRAPPC4-210ENST00000531290 IGLV1-50A0A075B6I6 118 aa13.45□□□□□ -0.26
TRAPPC4-210ENST00000531290 IGLC3P0DOY3 106 aa13.45□□□□□ -0.26
TRAPPC4-210ENST00000531290 XAGE1AQ9HD64 81 aa13.45□□□□□ -0.26
TRAPPC4-210ENST00000531290 LBHQ53QV2 105 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC4-210ENST00000531290 C22orf24Q9Y442 160 aa13.44□□□□□ -0.26
TRAPPC4-210ENST00000531290 COLCA2A8K830 154 aa13.41□□□□□ -0.26
TRAPPC4-210ENST00000531290 IFI27L1Q96BM0 104 aa13.41□□□□□ -0.26
TRAPPC4-210ENST00000531290 CHTOPQ9Y3Y2 248 aaKnown RBP13.41□□□□□ -0.26
TRAPPC4-210ENST00000531290 KRTAP1-4P0C5Y4 121 aa13.4□□□□□ -0.26
TRAPPC4-210ENST00000531290 TMEM170BQ5T4T1 132 aa13.4□□□□□ -0.26
TRAPPC4-210ENST00000531290 NUPR1O60356 82 aa13.39□□□□□ -0.27
TRAPPC4-210ENST00000531290 ZNF861PO60384 105 aa13.39□□□□□ -0.27
TRAPPC4-210ENST00000531290 ZNF22P17026 224 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC4-210ENST00000531290 RPL13AP40429 203 aaKnown RBP13.38□□□□□ -0.27
TRAPPC4-210ENST00000531290 FAM19A2Q8N3H0 131 aa13.38□□□□□ -0.27
TRAPPC4-210ENST00000531290 TRAV12-1A0A0B4J245 112 aa13.36□□□□□ -0.27
TRAPPC4-210ENST00000531290 C11orf86A6NJI1 115 aa13.36□□□□□ -0.27
TRAPPC4-210ENST00000531290 SERF1AO75920 110 aa13.36□□□□□ -0.27
TRAPPC4-210ENST00000531290 MRPL55Q7Z7F7 128 aaKnown RBP13.36□□□□□ -0.27
TRAPPC4-210ENST00000531290 TP73-AS1Q9UF72 201 aa13.36□□□□□ -0.27
TRAPPC4-210ENST00000531290 IGLV5-39A0A0G2JS06 123 aa13.34□□□□□ -0.27
TRAPPC4-210ENST00000531290 LEPROTL1O95214 131 aa13.34□□□□□ -0.27
TRAPPC4-210ENST00000531290 LPAP08519 4548 aa13.33□□□□□ -0.28
TRAPPC4-210ENST00000531290 SFTA2Q6UW10 78 aa13.32□□□□□ -0.28
TRAPPC4-210ENST00000531290 HSPB8Q9UJY1 196 aa13.32□□□□□ -0.28
TRAPPC4-210ENST00000531290 H0Y8G0 127 aa13.31□□□□□ -0.28
TRAPPC4-210ENST00000531290 SCO1O75880 301 aa13.31□□□□□ -0.28
TRAPPC4-210ENST00000531290 RPL28P46779 137 aaKnown RBP13.31□□□□□ -0.28
TRAPPC4-210ENST00000531290 BCE1O60756 84 aa13.3□□□□□ -0.28
TRAPPC4-210ENST00000531290 LINC00167Q96N53 147 aa13.29□□□□□ -0.28
TRAPPC4-210ENST00000531290 RPL37AP8A6NKH3 93 aa13.28□□□□□ -0.28
TRAPPC4-210ENST00000531290 PFN2P35080 140 aa13.28□□□□□ -0.28
TRAPPC4-210ENST00000531290 FABP4P15090 132 aa13.27□□□□□ -0.29
TRAPPC4-210ENST00000531290 GAGE10A6NGK3 116 aa13.26□□□□□ -0.29
TRAPPC4-210ENST00000531290 LINC00310P59036 64 aa13.26□□□□□ -0.29
TRAPPC4-210ENST00000531290 PRR4Q16378 134 aa13.26□□□□□ -0.29
TRAPPC4-210ENST00000531290 TMEM223A0PJW6 202 aa13.25□□□□□ -0.29
TRAPPC4-210ENST00000531290 COX17Q14061 63 aa13.25□□□□□ -0.29
TRAPPC4-210ENST00000531290 NKAPP1Q8N9T2 125 aa13.25□□□□□ -0.29
TRAPPC4-210ENST00000531290 ERG28Q9UKR5 140 aa13.25□□□□□ -0.29
TRAPPC4-210ENST00000531290 ZNF625Q96I27 306 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC4-210ENST00000531290 IGLV5-37A0A075B6J1 123 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms