RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 C19orf73Q9NVV2 129 aa8.05□□□□□ -1.12
TRIM3-210ENST00000530724 SPTAN1Q13813 2472 aaKnown RBP8.04□□□□□ -1.12
TRIM3-210ENST00000530724 GVQW2A0A096LPI5 108 aaPredicted RBP8.04□□□□□ -1.12
TRIM3-210ENST00000530724 TRGV4A0A0C4DH28 118 aa8.04□□□□□ -1.12
TRIM3-210ENST00000530724 A0A0J9YWU9 116 aa8.04□□□□□ -1.12
TRIM3-210ENST00000530724 IGHV4-30-4P0DP06 118 aa8.04□□□□□ -1.12
TRIM3-210ENST00000530724 GNLYP22749 145 aa8.04□□□□□ -1.12
TRIM3-210ENST00000530724 TRBV7-4A0A0J9YYF1 115 aa8.03□□□□□ -1.12
TRIM3-210ENST00000530724 HRCT1Q6UXD1 115 aa8.03□□□□□ -1.12
TRIM3-210ENST00000530724 Q6ZVQ6 151 aa8.03□□□□□ -1.12
TRIM3-210ENST00000530724 C16orf95Q9H693 158 aa8.03□□□□□ -1.12
TRIM3-210ENST00000530724 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.03□□□□□ -1.12
TRIM3-210ENST00000530724 RIF1Q5UIP0 2472 aaKnown RBP8.02□□□□□ -1.13
TRIM3-210ENST00000530724 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.02□□□□□ -1.13
TRIM3-210ENST00000530724 HIVEP3Q5T1R4 2406 aa8.02□□□□□ -1.13
TRIM3-210ENST00000530724 C6orf99Q4VX62 202 aa8.01□□□□□ -1.13
TRIM3-210ENST00000530724 IGLV1-51P01701 117 aa8□□□□□ -1.13
TRIM3-210ENST00000530724 A0A1B0GW54 56 aa7.99□□□□□ -1.13
TRIM3-210ENST00000530724 LAMA5O15230 3695 aa7.99□□□□□ -1.13
TRIM3-210ENST00000530724 CELA1Q9UNI1 258 aa7.99□□□□□ -1.13
TRIM3-210ENST00000530724 ZFHX2Q9C0A1 2572 aaPredicted RBP7.99□□□□□ -1.13
TRIM3-210ENST00000530724 CREBBPQ92793 2442 aa7.99□□□□□ -1.13
TRIM3-210ENST00000530724 CEP295Q9C0D2 2601 aa7.98□□□□□ -1.13
TRIM3-210ENST00000530724 WFDC9Q8NEX5 89 aa7.97□□□□□ -1.13
TRIM3-210ENST00000530724 PRO0255Q9UI72 69 aa7.97□□□□□ -1.13
TRIM3-210ENST00000530724 FP248Q71RG6 208 aaPredicted RBP7.96□□□□□ -1.14
TRIM3-210ENST00000530724 SORL1Q92673 2214 aa7.95□□□□□ -1.14
TRIM3-210ENST00000530724 Q8NDZ9 215 aa7.95□□□□□ -1.14
TRIM3-210ENST00000530724 SPATA3Q8NHX4 192 aa7.95□□□□□ -1.14
TRIM3-210ENST00000530724 CHCHD10Q8WYQ3 142 aaPredicted RBP7.95□□□□□ -1.14
TRIM3-210ENST00000530724 ASH1LQ9NR48 2969 aaKnown RBP7.94□□□□□ -1.14
TRIM3-210ENST00000530724 AKAP6Q13023 2319 aa7.94□□□□□ -1.14
TRIM3-210ENST00000530724 TRAV10A0A0B4J240 114 aa7.94□□□□□ -1.14
TRIM3-210ENST00000530724 IGKV3OR2-268A0A0C4DH90 116 aa7.94□□□□□ -1.14
TRIM3-210ENST00000530724 MIFP14174 115 aa7.94□□□□□ -1.14
TRIM3-210ENST00000530724 CELSR1Q9NYQ6 3014 aa7.93□□□□□ -1.14
TRIM3-210ENST00000530724 LYRM9A8MSI8 78 aa7.93□□□□□ -1.14
TRIM3-210ENST00000530724 GYPEP15421 78 aa7.93□□□□□ -1.14
TRIM3-210ENST00000530724 COX7BP24311 80 aa7.93□□□□□ -1.14
TRIM3-210ENST00000530724 PRR3P79522 188 aaKnown RBP7.93□□□□□ -1.14
TRIM3-210ENST00000530724 LINC00336Q6ZUF6 198 aa7.93□□□□□ -1.14
TRIM3-210ENST00000530724 Q8N3U1 123 aa7.93□□□□□ -1.14
TRIM3-210ENST00000530724 LAMTOR3Q9UHA4 124 aa7.93□□□□□ -1.14
TRIM3-210ENST00000530724 LCE6AA0A183 80 aa7.92□□□□□ -1.14
TRIM3-210ENST00000530724 F8WEM9 126 aa7.92□□□□□ -1.14
TRIM3-210ENST00000530724 ELOF1P60002 83 aaKnown RBP7.92□□□□□ -1.14
TRIM3-210ENST00000530724 DIRC1Q969H9 104 aa7.92□□□□□ -1.14
TRIM3-210ENST00000530724 MUC6Q6W4X9 2439 aa7.92□□□□□ -1.14
TRIM3-210ENST00000530724 A0A0U1RQV1 116 aa7.91□□□□□ -1.14
TRIM3-210ENST00000530724 HAMPP81172 84 aa7.91□□□□□ -1.14
TRIM3-210ENST00000530724 Q6ZQY7 126 aa7.91□□□□□ -1.14
TRIM3-210ENST00000530724 PRR34Q9NV39 138 aa7.91□□□□□ -1.14
TRIM3-210ENST00000530724 M0R2N4 97 aa7.9□□□□□ -1.14
TRIM3-210ENST00000530724 REG3AQ06141 175 aa7.9□□□□□ -1.14
TRIM3-210ENST00000530724 NREPQ16612 68 aa7.9□□□□□ -1.14
TRIM3-210ENST00000530724 KHDC1LQ5JSQ8 128 aa7.9□□□□□ -1.14
TRIM3-210ENST00000530724 TMEM254Q8TBM7 123 aa7.9□□□□□ -1.14
TRIM3-210ENST00000530724 OCR1Q9BZK8 76 aa7.9□□□□□ -1.14
TRIM3-210ENST00000530724 F8WDY8 70 aa7.89□□□□□ -1.15
TRIM3-210ENST00000530724 RMI2Q96E14 147 aa7.89□□□□□ -1.15
TRIM3-210ENST00000530724 DOPEY1Q5JWR5 2465 aa7.88□□□□□ -1.15
TRIM3-210ENST00000530724 BPY2O14599 106 aa7.88□□□□□ -1.15
TRIM3-210ENST00000530724 SPAG11BQ08648 103 aa7.88□□□□□ -1.15
TRIM3-210ENST00000530724 LINC00269Q8N2A0 174 aa7.88□□□□□ -1.15
TRIM3-210ENST00000530724 ZNF843Q8N446 348 aa7.88□□□□□ -1.15
TRIM3-210ENST00000530724 C11orf68Q9H3H3 251 aaKnown RBP7.88□□□□□ -1.15
TRIM3-210ENST00000530724 X6R8D5 127 aa7.88□□□□□ -1.15
TRIM3-210ENST00000530724 NBASA2RRP1 2371 aa7.88□□□□□ -1.15
TRIM3-210ENST00000530724 CACNA1AO00555 2505 aa7.87□□□□□ -1.15
TRIM3-210ENST00000530724 ZNF73O43830 326 aaPredicted RBP7.87□□□□□ -1.15
TRIM3-210ENST00000530724 TM2D3Q9BRN9 247 aa7.87□□□□□ -1.15
TRIM3-210ENST00000530724 CSPG4Q6UVK1 2322 aa7.86□□□□□ -1.15
TRIM3-210ENST00000530724 ATRXP46100 2492 aa7.86□□□□□ -1.15
TRIM3-210ENST00000530724 DNAJC9-AS1A6NH13 148 aa7.86□□□□□ -1.15
TRIM3-210ENST00000530724 IGKV4-1P06312 121 aa7.86□□□□□ -1.15
TRIM3-210ENST00000530724 RPL35AP18077 110 aaKnown RBP7.86□□□□□ -1.15
TRIM3-210ENST00000530724 LINC01006Q8NI28 216 aa7.86□□□□□ -1.15
TRIM3-210ENST00000530724 DEFB113Q30KQ7 82 aa7.85□□□□□ -1.15
TRIM3-210ENST00000530724 LELP1Q5T871 98 aa7.85□□□□□ -1.15
TRIM3-210ENST00000530724 LINC00528Q8N1L1 170 aa7.85□□□□□ -1.15
TRIM3-210ENST00000530724 SNURFQ9Y675 71 aa7.85□□□□□ -1.15
TRIM3-210ENST00000530724 CYSRT1A8MQ03 144 aa7.84□□□□□ -1.15
TRIM3-210ENST00000530724 M0R378 163 aa7.84□□□□□ -1.15
TRIM3-210ENST00000530724 PRYO14603 147 aa7.84□□□□□ -1.15
TRIM3-210ENST00000530724 VPREB1P12018 145 aa7.84□□□□□ -1.15
TRIM3-210ENST00000530724 C9orf116Q5BN46 136 aaPredicted RBP7.84□□□□□ -1.15
TRIM3-210ENST00000530724 C10orf25Q5T742 122 aa7.84□□□□□ -1.15
TRIM3-210ENST00000530724 UNQ6190/PRO20217Q6UXQ8 127 aa7.84□□□□□ -1.15
TRIM3-210ENST00000530724 IGF2RP11717 2491 aa7.84□□□□□ -1.16
TRIM3-210ENST00000530724 SVEP1Q4LDE5 3571 aa7.83□□□□□ -1.16
TRIM3-210ENST00000530724 RNASE1P07998 156 aaKnown RBP7.83□□□□□ -1.16
TRIM3-210ENST00000530724 EGFEM1PQ0D2K5 195 aa7.83□□□□□ -1.16
TRIM3-210ENST00000530724 Q6ZTC4 211 aa7.83□□□□□ -1.16
TRIM3-210ENST00000530724 BBC3Q96PG8 261 aaPredicted RBP7.83□□□□□ -1.16
TRIM3-210ENST00000530724 IGLV5-48A0A075B6I7 105 aa7.82□□□□□ -1.16
TRIM3-210ENST00000530724 DEFB130BP0DP73 79 aa7.82□□□□□ -1.16
TRIM3-210ENST00000530724 DEFB130AP0DP74 79 aa7.82□□□□□ -1.16
TRIM3-210ENST00000530724 ESRGQ1W209 222 aa7.82□□□□□ -1.16
TRIM3-210ENST00000530724 KRTAP1-3Q8IUG1 177 aa7.82□□□□□ -1.16
TRIM3-210ENST00000530724 ANGP03950 147 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms