RNA–Protein interactions for RNA: ENST00000530459.1

GMDS-207, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-207ENST00000530459 GPR179Q6PRD1 2367 aa3.41□□□□□ -1.86
GMDS-207ENST00000530459 SPEGQ15772 3267 aa3.41□□□□□ -1.86
GMDS-207ENST00000530459 A0A0J9YWU9 116 aa3.4□□□□□ -1.87
GMDS-207ENST00000530459 IGHV4-30-4P0DP06 118 aa3.4□□□□□ -1.87
GMDS-207ENST00000530459 CD164Q04900 197 aa3.4□□□□□ -1.87
GMDS-207ENST00000530459 ODF3L2Q3SX64 289 aa3.4□□□□□ -1.87
GMDS-207ENST00000530459 CD164L2Q6UWJ8 174 aa3.4□□□□□ -1.87
GMDS-207ENST00000530459 Q6ZQY7 126 aa3.4□□□□□ -1.87
GMDS-207ENST00000530459 C4orf3Q8WVX3 66 aa3.4□□□□□ -1.87
GMDS-207ENST00000530459 ZCCHC13Q8WW36 166 aaKnown RBP3.4□□□□□ -1.87
GMDS-207ENST00000530459 PCNX1Q96RV3 2341 aa3.4□□□□□ -1.87
GMDS-207ENST00000530459 ZNF702PQ9H963 129 aa3.4□□□□□ -1.87
GMDS-207ENST00000530459 FRYLO94915 3013 aa3.4□□□□□ -1.87
GMDS-207ENST00000530459 ZDBF2Q9HCK1 2354 aa3.39□□□□□ -1.87
GMDS-207ENST00000530459 WDFY3Q8IZQ1 3526 aa3.39□□□□□ -1.87
GMDS-207ENST00000530459 TRIOO75962 3097 aa3.39□□□□□ -1.87
GMDS-207ENST00000530459 GVQW2A0A096LPI5 108 aaPredicted RBP3.39□□□□□ -1.87
GMDS-207ENST00000530459 A0A0A0MQY5 61 aa3.39□□□□□ -1.87
GMDS-207ENST00000530459 LYRM9A8MSI8 78 aa3.39□□□□□ -1.87
GMDS-207ENST00000530459 B4DSR2 109 aa3.39□□□□□ -1.87
GMDS-207ENST00000530459 PRR3P79522 188 aaKnown RBP3.39□□□□□ -1.87
GMDS-207ENST00000530459 DEFB112Q30KQ8 113 aa3.39□□□□□ -1.87
GMDS-207ENST00000530459 LINC00612Q8N6U2 182 aa3.39□□□□□ -1.87
GMDS-207ENST00000530459 MPLKIPQ8TAP9 179 aa3.39□□□□□ -1.87
GMDS-207ENST00000530459 DIRC1Q969H9 104 aa3.39□□□□□ -1.87
GMDS-207ENST00000530459 TRGV2A0A075B6R0 118 aa3.38□□□□□ -1.87
GMDS-207ENST00000530459 TRGV4A0A0C4DH28 118 aa3.38□□□□□ -1.87
GMDS-207ENST00000530459 IGKV3OR2-268A0A0C4DH90 116 aa3.38□□□□□ -1.87
GMDS-207ENST00000530459 KRTAP23-1A1A580 65 aa3.38□□□□□ -1.87
GMDS-207ENST00000530459 FSHBP01225 129 aa3.38□□□□□ -1.87
GMDS-207ENST00000530459 VPREB1P12018 145 aa3.38□□□□□ -1.87
GMDS-207ENST00000530459 DSCR9P59020 149 aa3.38□□□□□ -1.87
GMDS-207ENST00000530459 ELOF1P60002 83 aaKnown RBP3.38□□□□□ -1.87
GMDS-207ENST00000530459 Q6ZRP5 223 aa3.38□□□□□ -1.87
GMDS-207ENST00000530459 Q8NDZ9 215 aa3.38□□□□□ -1.87
GMDS-207ENST00000530459 BBC3Q96PG8 261 aaPredicted RBP3.38□□□□□ -1.87
GMDS-207ENST00000530459 NOP10Q9NPE3 64 aaKnown RBP3.38□□□□□ -1.87
GMDS-207ENST00000530459 PTPRQQ9UMZ3 2332 aa3.38□□□□□ -1.87
GMDS-207ENST00000530459 GIG44P09565 113 aaPredicted RBP3.37□□□□□ -1.87
GMDS-207ENST00000530459 DAD1P61803 113 aa3.37□□□□□ -1.87
GMDS-207ENST00000530459 Q6YL49 198 aa3.37□□□□□ -1.87
GMDS-207ENST00000530459 CSNK1G2-AS1Q8NCQ2 148 aa3.37□□□□□ -1.87
GMDS-207ENST00000530459 ANKHD1Q8IWZ3 2542 aaKnown RBP3.37□□□□□ -1.87
GMDS-207ENST00000530459 TNRC18O15417 2968 aaPredicted RBP3.36□□□□□ -1.87
GMDS-207ENST00000530459 SCXQ7RTU7 201 aa3.36□□□□□ -1.87
GMDS-207ENST00000530459 C1orf64Q8NEQ6 169 aa3.36□□□□□ -1.87
GMDS-207ENST00000530459 HIGD2AQ9BW72 106 aa3.36□□□□□ -1.87
GMDS-207ENST00000530459 ABCA2Q9BZC7 2435 aa3.36□□□□□ -1.87
GMDS-207ENST00000530459 CFAP54Q96N23 3096 aa3.36□□□□□ -1.87
GMDS-207ENST00000530459 IGLV5-48A0A075B6I7 105 aa3.35□□□□□ -1.87
GMDS-207ENST00000530459 TRAV22A0A0B4J277 110 aa3.35□□□□□ -1.87
GMDS-207ENST00000530459 ZNF73O43830 326 aaPredicted RBP3.35□□□□□ -1.87
GMDS-207ENST00000530459 NDUFB1O75438 58 aa3.35□□□□□ -1.87
GMDS-207ENST00000530459 DEFB123Q8N688 67 aa3.35□□□□□ -1.87
GMDS-207ENST00000530459 LINC01006Q8NI28 216 aa3.35□□□□□ -1.87
GMDS-207ENST00000530459 CHCHD10Q8WYQ3 142 aaPredicted RBP3.35□□□□□ -1.87
GMDS-207ENST00000530459 SPTBN1Q01082 2364 aaKnown RBP3.35□□□□□ -1.87
GMDS-207ENST00000530459 EP300Q09472 2414 aaPredicted RBP3.35□□□□□ -1.87
GMDS-207ENST00000530459 FREM2Q5SZK8 3169 aa3.35□□□□□ -1.87
GMDS-207ENST00000530459 VPS13AQ96RL7 3174 aa3.35□□□□□ -1.87
GMDS-207ENST00000530459 RP1L1Q8IWN7 2480 aaPredicted RBP3.35□□□□□ -1.87
GMDS-207ENST00000530459 CFAP47Q6ZTR5 3102 aa3.35□□□□□ -1.87
GMDS-207ENST00000530459 CACNA1HO95180 2353 aa3.34□□□□□ -1.87
GMDS-207ENST00000530459 DSPP15924 2871 aaKnown RBP3.34□□□□□ -1.87
GMDS-207ENST00000530459 COL6A6A6NMZ7 2263 aa3.34□□□□□ -1.87
GMDS-207ENST00000530459 ETDCA0A1B0GVM5 59 aa3.34□□□□□ -1.87
GMDS-207ENST00000530459 PSCAO43653 123 aa3.34□□□□□ -1.87
GMDS-207ENST00000530459 UBE2BP63146 152 aa3.34□□□□□ -1.87
GMDS-207ENST00000530459 DEFB136Q30KP8 78 aa3.34□□□□□ -1.87
GMDS-207ENST00000530459 HIGD2BQ4VC39 106 aa3.34□□□□□ -1.87
GMDS-207ENST00000530459 C18orf65Q6ZTR6 163 aa3.34□□□□□ -1.87
GMDS-207ENST00000530459 SORL1Q92673 2214 aa3.34□□□□□ -1.88
GMDS-207ENST00000530459 M0R378 163 aa3.33□□□□□ -1.88
GMDS-207ENST00000530459 REG3AQ06141 175 aa3.33□□□□□ -1.88
GMDS-207ENST00000530459 SPAG11BQ08648 103 aa3.33□□□□□ -1.88
GMDS-207ENST00000530459 C9orf116Q5BN46 136 aaPredicted RBP3.33□□□□□ -1.88
GMDS-207ENST00000530459 UNQ6190/PRO20217Q6UXQ8 127 aa3.33□□□□□ -1.88
GMDS-207ENST00000530459 LINC00269Q8N2A0 174 aa3.33□□□□□ -1.88
GMDS-207ENST00000530459 SPANXA2-OT1Q8N9U9 137 aa3.33□□□□□ -1.88
GMDS-207ENST00000530459 CCL19Q99731 98 aa3.33□□□□□ -1.88
GMDS-207ENST00000530459 PRO0255Q9UI72 69 aa3.33□□□□□ -1.88
GMDS-207ENST00000530459 CR1P17927 2039 aa3.32□□□□□ -1.88
GMDS-207ENST00000530459 OTOGLQ3ZCN5 2332 aa3.32□□□□□ -1.88
GMDS-207ENST00000530459 PRUNE2Q8WUY3 3088 aa3.32□□□□□ -1.88
GMDS-207ENST00000530459 CYSRT1A8MQ03 144 aa3.32□□□□□ -1.88
GMDS-207ENST00000530459 H3BPC8 53 aa3.32□□□□□ -1.88
GMDS-207ENST00000530459 NDUFS5O43920 106 aa3.32□□□□□ -1.88
GMDS-207ENST00000530459 SYCNQ0VAF6 134 aa3.32□□□□□ -1.88
GMDS-207ENST00000530459 C10orf25Q5T742 122 aa3.32□□□□□ -1.88
GMDS-207ENST00000530459 KTN1-AS1Q86SY8 53 aa3.32□□□□□ -1.88
GMDS-207ENST00000530459 SMIM29Q86T20 159 aa3.32□□□□□ -1.88
GMDS-207ENST00000530459 SPRR4Q96PI1 79 aa3.32□□□□□ -1.88
GMDS-207ENST00000530459 Q9BRP9 147 aa3.32□□□□□ -1.88
GMDS-207ENST00000530459 LIMD2Q9BT23 127 aa3.32□□□□□ -1.88
GMDS-207ENST00000530459 PRR34Q9NV39 138 aa3.32□□□□□ -1.88
GMDS-207ENST00000530459 LINC00588Q9Y4M8 146 aa3.32□□□□□ -1.88
GMDS-207ENST00000530459 TRIOBPQ9H2D6 2365 aa3.32□□□□□ -1.88
GMDS-207ENST00000530459 NCOR1O75376 2440 aa3.32□□□□□ -1.88
GMDS-207ENST00000530459 MAP1BP46821 2468 aaKnown RBP3.31□□□□□ -1.88
GMDS-207ENST00000530459 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms