RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 IBA57-AS1B1ANH7 110 aa9.61□□□□□ -0.87
TTC39A-216ENST00000530004 TIMM17BO60830 172 aa9.61□□□□□ -0.87
TTC39A-216ENST00000530004 Q9HAA7 133 aa9.61□□□□□ -0.87
TTC39A-216ENST00000530004 IGKV2D-24A0A075B6R9 120 aa9.6□□□□□ -0.87
TTC39A-216ENST00000530004 A6NDN8 102 aa9.6□□□□□ -0.87
TTC39A-216ENST00000530004 M0R2N4 97 aa9.6□□□□□ -0.87
TTC39A-216ENST00000530004 CIRBPQ14011 172 aaKnown RBP9.6□□□□□ -0.87
TTC39A-216ENST00000530004 KIAA0087Q14695 138 aa9.6□□□□□ -0.87
TTC39A-216ENST00000530004 MEIG1Q5JSS6 88 aa9.6□□□□□ -0.87
TTC39A-216ENST00000530004 ADAMTSL4-AS1Q5T5F5 129 aa9.6□□□□□ -0.87
TTC39A-216ENST00000530004 Q6ZR54 194 aa9.6□□□□□ -0.87
TTC39A-216ENST00000530004 CFAP161Q6P656 301 aa9.6□□□□□ -0.87
TTC39A-216ENST00000530004 SFTA2Q6UW10 78 aa9.6□□□□□ -0.87
TTC39A-216ENST00000530004 SPANXDQ9BXN6 97 aa9.6□□□□□ -0.87
TTC39A-216ENST00000530004 SPANXCQ9NY87 97 aa9.6□□□□□ -0.87
TTC39A-216ENST00000530004 NHP2Q9NX24 153 aaKnown RBP9.59□□□□□ -0.87
TTC39A-216ENST00000530004 DNAH1Q9P2D7 4330 aa9.59□□□□□ -0.87
TTC39A-216ENST00000530004 A0A0U1RRA0 63 aa9.58□□□□□ -0.88
TTC39A-216ENST00000530004 CKS1BP61024 79 aa9.58□□□□□ -0.88
TTC39A-216ENST00000530004 SPAG11BQ08648 103 aa9.58□□□□□ -0.88
TTC39A-216ENST00000530004 C2orf82Q6UX34 121 aa9.58□□□□□ -0.88
TTC39A-216ENST00000530004 MUSTN1Q8IVN3 82 aa9.58□□□□□ -0.88
TTC39A-216ENST00000530004 VPS13DQ5THJ4 4388 aa9.58□□□□□ -0.88
TTC39A-216ENST00000530004 ALMS1Q8TCU4 4167 aa9.58□□□□□ -0.88
TTC39A-216ENST00000530004 SMIM13P0DJ93 91 aa9.58□□□□□ -0.88
TTC39A-216ENST00000530004 Q6ZVH6 145 aa9.58□□□□□ -0.88
TTC39A-216ENST00000530004 DAND5Q8N907 189 aa9.58□□□□□ -0.88
TTC39A-216ENST00000530004 TMEM238LA0A1B0GVL6 79 aa9.57□□□□□ -0.88
TTC39A-216ENST00000530004 A6NJY4 79 aa9.57□□□□□ -0.88
TTC39A-216ENST00000530004 CXCL5P42830 114 aa9.57□□□□□ -0.88
TTC39A-216ENST00000530004 K7ERJ3 54 aa9.56□□□□□ -0.88
TTC39A-216ENST00000530004 TAX1BP3O14907 124 aa9.56□□□□□ -0.88
TTC39A-216ENST00000530004 NPC2P61916 151 aa9.56□□□□□ -0.88
TTC39A-216ENST00000530004 A0A1B0GV90 55 aa9.55□□□□□ -0.88
TTC39A-216ENST00000530004 RPL24P83731 157 aaKnown RBP9.55□□□□□ -0.88
TTC39A-216ENST00000530004 C6orf223Q8N319 242 aa9.55□□□□□ -0.88
TTC39A-216ENST00000530004 LINC00526Q96FQ7 95 aa9.55□□□□□ -0.88
TTC39A-216ENST00000530004 KMT2AQ03164 3969 aa9.55□□□□□ -0.88
TTC39A-216ENST00000530004 A4D1N5 150 aa9.54□□□□□ -0.88
TTC39A-216ENST00000530004 LINC00158P58513 81 aa9.54□□□□□ -0.88
TTC39A-216ENST00000530004 HIGD2BQ4VC39 106 aa9.54□□□□□ -0.88
TTC39A-216ENST00000530004 C15orf56Q8N910 161 aa9.54□□□□□ -0.88
TTC39A-216ENST00000530004 RAB37Q96AX2 223 aa9.54□□□□□ -0.88
TTC39A-216ENST00000530004 RMI2Q96E14 147 aa9.54□□□□□ -0.88
TTC39A-216ENST00000530004 ERG28Q9UKR5 140 aa9.54□□□□□ -0.88
TTC39A-216ENST00000530004 KMT2CQ8NEZ4 4911 aaKnown RBP9.54□□□□□ -0.88
TTC39A-216ENST00000530004 A0A1B0GWB2 263 aa9.53□□□□□ -0.88
TTC39A-216ENST00000530004 IFITM1P13164 125 aa9.53□□□□□ -0.88
TTC39A-216ENST00000530004 PFN2P35080 140 aa9.53□□□□□ -0.88
TTC39A-216ENST00000530004 ZNF561-AS1K7EIQ3 104 aa9.52□□□□□ -0.88
TTC39A-216ENST00000530004 EIF4EBP3O60516 100 aaPredicted RBP9.52□□□□□ -0.88
TTC39A-216ENST00000530004 LINC00308Q8TCZ7 52 aa9.52□□□□□ -0.88
TTC39A-216ENST00000530004 SACSQ9NZJ4 4579 aa9.52□□□□□ -0.89
TTC39A-216ENST00000530004 C1orf134Q5TEV5 83 aa9.52□□□□□ -0.89
TTC39A-216ENST00000530004 MIR7-3HGQ8N6C7 128 aa9.52□□□□□ -0.89
TTC39A-216ENST00000530004 NTN5Q8WTR8 489 aaPredicted RBP9.52□□□□□ -0.89
TTC39A-216ENST00000530004 CFC1BP0CG36 223 aa9.51□□□□□ -0.89
TTC39A-216ENST00000530004 CFC1P0CG37 223 aa9.51□□□□□ -0.89
TTC39A-216ENST00000530004 C10orf25Q5T742 122 aa9.51□□□□□ -0.89
TTC39A-216ENST00000530004 UNQ6190/PRO20217Q6UXQ8 127 aa9.51□□□□□ -0.89
TTC39A-216ENST00000530004 COX11Q9Y6N1 276 aa9.51□□□□□ -0.89
TTC39A-216ENST00000530004 SOSTDC1Q6X4U4 206 aa9.5□□□□□ -0.89
TTC39A-216ENST00000530004 COPS9Q8WXC6 57 aa9.5□□□□□ -0.89
TTC39A-216ENST00000530004 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.5□□□□□ -0.89
TTC39A-216ENST00000530004 C9orf116Q5BN46 136 aaPredicted RBP9.5□□□□□ -0.89
TTC39A-216ENST00000530004 Q6ZRN7 208 aaPredicted RBP9.5□□□□□ -0.89
TTC39A-216ENST00000530004 HYDINQ4G0P3 5121 aa9.49□□□□□ -0.89
TTC39A-216ENST00000530004 GVQW2A0A096LPI5 108 aaPredicted RBP9.49□□□□□ -0.89
TTC39A-216ENST00000530004 C9orf118A6NHY6 69 aa9.48□□□□□ -0.89
TTC39A-216ENST00000530004 COX17Q14061 63 aa9.48□□□□□ -0.89
TTC39A-216ENST00000530004 CAMK2N2Q96S95 79 aa9.48□□□□□ -0.89
TTC39A-216ENST00000530004 NAA38Q9BRA0 125 aaKnown RBP9.48□□□□□ -0.89
TTC39A-216ENST00000530004 A0A0B4J2C4 111 aa9.47□□□□□ -0.89
TTC39A-216ENST00000530004 C2orf48Q96LS8 159 aa9.47□□□□□ -0.89
TTC39A-216ENST00000530004 USP17L23D6RBM5 183 aa9.47□□□□□ -0.89
TTC39A-216ENST00000530004 H3BUT2 72 aa9.47□□□□□ -0.89
TTC39A-216ENST00000530004 PPDPFQ9H3Y8 114 aa9.47□□□□□ -0.89
TTC39A-216ENST00000530004 C6orf48Q9UBA6 75 aa9.47□□□□□ -0.89
TTC39A-216ENST00000530004 DNAH10Q8IVF4 4471 aa9.46□□□□□ -0.9
TTC39A-216ENST00000530004 RTL8CO15255 209 aa9.45□□□□□ -0.9
TTC39A-216ENST00000530004 PSCAO43653 123 aa9.45□□□□□ -0.9
TTC39A-216ENST00000530004 Q6ZRU5 148 aa9.45□□□□□ -0.9
TTC39A-216ENST00000530004 PGPEP1Q9NXJ5 209 aa9.45□□□□□ -0.9
TTC39A-216ENST00000530004 PRO1854Q9UHT4 67 aa9.45□□□□□ -0.9
TTC39A-216ENST00000530004 TRBV30A0A0K0K1B3 111 aa9.45□□□□□ -0.9
TTC39A-216ENST00000530004 LECT2O14960 151 aa9.45□□□□□ -0.9
TTC39A-216ENST00000530004 RYR2Q92736 4967 aa9.44□□□□□ -0.9
TTC39A-216ENST00000530004 DNAH6Q9C0G6 4158 aa9.44□□□□□ -0.9
TTC39A-216ENST00000530004 F8WDY8 70 aa9.44□□□□□ -0.9
TTC39A-216ENST00000530004 TSPAN13O95857 204 aa9.43□□□□□ -0.9
TTC39A-216ENST00000530004 SND1-IT1Q9HBX3 110 aa9.43□□□□□ -0.9
TTC39A-216ENST00000530004 SYCNQ0VAF6 134 aa9.42□□□□□ -0.9
TTC39A-216ENST00000530004 A0A1W2PPM0 123 aa9.42□□□□□ -0.9
TTC39A-216ENST00000530004 VAMP3Q15836 100 aa9.42□□□□□ -0.9
TTC39A-216ENST00000530004 H7C2G1 150 aa9.41□□□□□ -0.9
TTC39A-216ENST00000530004 LOC107984156A0A0G2JMH3 177 aa9.4□□□□□ -0.9
TTC39A-216ENST00000530004 WFDC2Q14508 124 aa9.4□□□□□ -0.9
TTC39A-216ENST00000530004 ARL17AQ8IVW1 177 aa9.4□□□□□ -0.9
TTC39A-216ENST00000530004 LRCOL1A6NCL2 159 aa9.4□□□□□ -0.91
TTC39A-216ENST00000530004 SLPIP03973 132 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 180.9 ms