RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 SND1-IT1Q9HBX3 110 aa10.01□□□□□ -0.81
USP48-213ENST00000529637 FASNP49327 2511 aaKnown RBP10.01□□□□□ -0.81
USP48-213ENST00000529637 RPS28P62857 69 aaKnown RBP10.01□□□□□ -0.81
USP48-213ENST00000529637 COPS9Q8WXC6 57 aa10.01□□□□□ -0.81
USP48-213ENST00000529637 TOMM7Q9P0U1 55 aa10.01□□□□□ -0.81
USP48-213ENST00000529637 LECT2O14960 151 aa10.01□□□□□ -0.81
USP48-213ENST00000529637 PLA2G2AP14555 144 aa10.01□□□□□ -0.81
USP48-213ENST00000529637 WFDC9Q8NEX5 89 aa10.01□□□□□ -0.81
USP48-213ENST00000529637 TRAV13-2A0A0B4J235 113 aa10□□□□□ -0.81
USP48-213ENST00000529637 TRGV4A0A0C4DH28 118 aa10□□□□□ -0.81
USP48-213ENST00000529637 LOC100131303A0A0U1RQF7 123 aa10□□□□□ -0.81
USP48-213ENST00000529637 C4orf26Q17RF5 130 aa10□□□□□ -0.81
USP48-213ENST00000529637 SERP2Q8N6R1 65 aa10□□□□□ -0.81
USP48-213ENST00000529637 CDC42SE2Q9NRR3 84 aa10□□□□□ -0.81
USP48-213ENST00000529637 USP17L23D6RBM5 183 aa10□□□□□ -0.81
USP48-213ENST00000529637 HILS1P60008 231 aa10□□□□□ -0.81
USP48-213ENST00000529637 LINC01006Q8NI28 216 aa9.99□□□□□ -0.81
USP48-213ENST00000529637 Q6JHZ5 121 aa9.98□□□□□ -0.81
USP48-213ENST00000529637 FAM19A3Q7Z5A8 133 aa9.98□□□□□ -0.81
USP48-213ENST00000529637 TMEM243Q9BU79 118 aa9.98□□□□□ -0.81
USP48-213ENST00000529637 TRBV10-1A0A0K0K1A3 114 aa9.97□□□□□ -0.81
USP48-213ENST00000529637 OR13C6PQ8NH95 151 aa9.97□□□□□ -0.81
USP48-213ENST00000529637 OBSCN-AS1Q96MR7 158 aa9.97□□□□□ -0.81
USP48-213ENST00000529637 TENM4Q6N022 2769 aa9.97□□□□□ -0.81
USP48-213ENST00000529637 CCL18P55774 89 aa9.97□□□□□ -0.81
USP48-213ENST00000529637 LINC00158P58513 81 aa9.97□□□□□ -0.81
USP48-213ENST00000529637 DEFB130BP0DP73 79 aa9.96□□□□□ -0.82
USP48-213ENST00000529637 DEFB130AP0DP74 79 aa9.96□□□□□ -0.82
USP48-213ENST00000529637 PFN2P35080 140 aa9.96□□□□□ -0.82
USP48-213ENST00000529637 TMEM258P61165 79 aa9.96□□□□□ -0.82
USP48-213ENST00000529637 FHL2Q14192 279 aa9.96□□□□□ -0.82
USP48-213ENST00000529637 SS18Q15532 418 aa9.96□□□□□ -0.82
USP48-213ENST00000529637 HECTD1Q9ULT8 2610 aa9.96□□□□□ -0.82
USP48-213ENST00000529637 PF4P02776 101 aa9.95□□□□□ -0.82
USP48-213ENST00000529637 HRCT1Q6UXD1 115 aa9.94□□□□□ -0.82
USP48-213ENST00000529637 COX7B2Q8TF08 81 aa9.94□□□□□ -0.82
USP48-213ENST00000529637 C16orf74Q96GX8 76 aa9.94□□□□□ -0.82
USP48-213ENST00000529637 UNC79Q9P2D8 2635 aa9.94□□□□□ -0.82
USP48-213ENST00000529637 Q5XG85 94 aa9.94□□□□□ -0.82
USP48-213ENST00000529637 GIG44P09565 113 aaPredicted RBP9.93□□□□□ -0.82
USP48-213ENST00000529637 IL17DQ8TAD2 202 aa9.93□□□□□ -0.82
USP48-213ENST00000529637 TRAV23DV6A0A075B6W5 121 aa9.92□□□□□ -0.82
USP48-213ENST00000529637 FAM19A1Q7Z5A9 133 aa9.92□□□□□ -0.82
USP48-213ENST00000529637 C11orf68Q9H3H3 251 aaKnown RBP9.92□□□□□ -0.82
USP48-213ENST00000529637 PAX4O43316 350 aa9.92□□□□□ -0.82
USP48-213ENST00000529637 CMC4P56277 68 aaPredicted RBP9.91□□□□□ -0.82
USP48-213ENST00000529637 H0YGX0 51 aa9.91□□□□□ -0.82
USP48-213ENST00000529637 IGLV1-51P01701 117 aa9.9□□□□□ -0.82
USP48-213ENST00000529637 OVOL2Q9BRP0 275 aa9.9□□□□□ -0.83
USP48-213ENST00000529637 IGLV4-60A0A075B6I1 120 aa9.89□□□□□ -0.83
USP48-213ENST00000529637 GHRHP01286 108 aa9.89□□□□□ -0.83
USP48-213ENST00000529637 PRR3P79522 188 aaKnown RBP9.89□□□□□ -0.83
USP48-213ENST00000529637 A0A096LPF7 62 aa9.89□□□□□ -0.83
USP48-213ENST00000529637 RNASE1P07998 156 aaKnown RBP9.89□□□□□ -0.83
USP48-213ENST00000529637 PLAC8L1A1L4L8 177 aa9.88□□□□□ -0.83
USP48-213ENST00000529637 ENHOQ6UWT2 76 aa9.88□□□□□ -0.83
USP48-213ENST00000529637 SMR3AQ99954 134 aa9.88□□□□□ -0.83
USP48-213ENST00000529637 CCKP06307 115 aa9.88□□□□□ -0.83
USP48-213ENST00000529637 TRBV6-4A0A1B0GX49 114 aa9.88□□□□□ -0.83
USP48-213ENST00000529637 CLPSL2Q6UWE3 100 aa9.87□□□□□ -0.83
USP48-213ENST00000529637 ORMDL1Q9P0S3 153 aa9.87□□□□□ -0.83
USP48-213ENST00000529637 WIPF1O43516 503 aa9.86□□□□□ -0.83
USP48-213ENST00000529637 KRTAP1-1Q07627 177 aa9.86□□□□□ -0.83
USP48-213ENST00000529637 C20orf197Q8N268 126 aa9.86□□□□□ -0.83
USP48-213ENST00000529637 C19orf73Q9NVV2 129 aa9.86□□□□□ -0.83
USP48-213ENST00000529637 TRBV6-8A0A0A6YYG3 113 aa9.86□□□□□ -0.83
USP48-213ENST00000529637 IGHV3OR16-9A0A0B4J2B5 98 aa9.86□□□□□ -0.83
USP48-213ENST00000529637 PDZD2O15018 2839 aa9.84□□□□□ -0.83
USP48-213ENST00000529637 GYPEP15421 78 aa9.84□□□□□ -0.83
USP48-213ENST00000529637 XCL1P47992 114 aa9.84□□□□□ -0.83
USP48-213ENST00000529637 CSNK1G2-AS1Q8NCQ2 148 aa9.84□□□□□ -0.83
USP48-213ENST00000529637 IBA57-AS1B1ANH7 110 aa9.83□□□□□ -0.84
USP48-213ENST00000529637 C16orf95Q9H693 158 aa9.83□□□□□ -0.84
USP48-213ENST00000529637 ATRQ13535 2644 aa9.83□□□□□ -0.84
USP48-213ENST00000529637 VWFP04275 2813 aa9.83□□□□□ -0.84
USP48-213ENST00000529637 DEFB4AO15263 64 aa9.83□□□□□ -0.84
USP48-213ENST00000529637 NANOS2P60321 138 aaKnown RBP9.82□□□□□ -0.84
USP48-213ENST00000529637 C6orf226Q5I0X4 101 aa9.81□□□□□ -0.84
USP48-213ENST00000529637 LY6G6DO95868 133 aa9.8□□□□□ -0.84
USP48-213ENST00000529637 LINC00482Q8N8I6 264 aa9.8□□□□□ -0.84
USP48-213ENST00000529637 Q8N814 137 aa9.8□□□□□ -0.84
USP48-213ENST00000529637 A0A087WZ39 114 aa9.8□□□□□ -0.84
USP48-213ENST00000529637 M0R2N4 97 aa9.8□□□□□ -0.84
USP48-213ENST00000529637 J3QKU1 62 aa9.78□□□□□ -0.84
USP48-213ENST00000529637 LINC00959A0A1B0GUT2 108 aa9.77□□□□□ -0.85
USP48-213ENST00000529637 DEFB135Q30KP9 77 aa9.77□□□□□ -0.85
USP48-213ENST00000529637 LYPD5Q6UWN5 251 aa9.77□□□□□ -0.85
USP48-213ENST00000529637 LINC00167Q96N53 147 aa9.77□□□□□ -0.85
USP48-213ENST00000529637 NDUFC2O95298 119 aa9.77□□□□□ -0.85
USP48-213ENST00000529637 JMJD7-PLA2G4BH0Y9G9 81 aa9.76□□□□□ -0.85
USP48-213ENST00000529637 IGLV10-54A0A075B6I4 117 aa9.76□□□□□ -0.85
USP48-213ENST00000529637 FAM236DA0A1B0GTK5 79 aa9.76□□□□□ -0.85
USP48-213ENST00000529637 H7BZZ5 65 aa9.76□□□□□ -0.85
USP48-213ENST00000529637 FAM236CP0DP71 79 aa9.76□□□□□ -0.85
USP48-213ENST00000529637 HTN3P15516 51 aa9.76□□□□□ -0.85
USP48-213ENST00000529637 KRTAP10-3P60369 221 aa9.76□□□□□ -0.85
USP48-213ENST00000529637 S100A7L2Q5SY68 101 aa9.75□□□□□ -0.85
USP48-213ENST00000529637 Q8NDZ9 215 aa9.75□□□□□ -0.85
USP48-213ENST00000529637 SPATA3Q8NHX4 192 aa9.75□□□□□ -0.85
USP48-213ENST00000529637 SNURFQ9Y675 71 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 1024.6 ms