RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 CHCHD5Q9BSY4 110 aa5.55□□□□□ -1.52
SSBP3-212ENST00000528930 SPANXB1Q9NS25 103 aaPredicted RBP5.55□□□□□ -1.52
SSBP3-212ENST00000528930 TRBV25-1A0A075B6N4 114 aa5.54□□□□□ -1.52
SSBP3-212ENST00000528930 IGKV2D-24A0A075B6R9 120 aa5.54□□□□□ -1.52
SSBP3-212ENST00000528930 IGLV5-52A0A0A0MRZ9 124 aa5.54□□□□□ -1.52
SSBP3-212ENST00000528930 TRAV26-2A0A0B4J265 109 aa5.54□□□□□ -1.52
SSBP3-212ENST00000528930 A0A0U1RQV1 116 aa5.54□□□□□ -1.52
SSBP3-212ENST00000528930 PRSS47A8MTI9 375 aa5.54□□□□□ -1.52
SSBP3-212ENST00000528930 M0QXV9 152 aa5.54□□□□□ -1.52
SSBP3-212ENST00000528930 GCSHP23434 173 aa5.54□□□□□ -1.52
SSBP3-212ENST00000528930 GAGE6Q13070 117 aa5.54□□□□□ -1.52
SSBP3-212ENST00000528930 BAALCQ8WXS3 180 aa5.54□□□□□ -1.52
SSBP3-212ENST00000528930 RMI2Q96E14 147 aa5.54□□□□□ -1.52
SSBP3-212ENST00000528930 LECT2O14960 151 aa5.53□□□□□ -1.52
SSBP3-212ENST00000528930 ATP5LO75964 103 aa5.53□□□□□ -1.52
SSBP3-212ENST00000528930 TSPAN13O95857 204 aa5.53□□□□□ -1.52
SSBP3-212ENST00000528930 ANGP03950 147 aaKnown RBP5.53□□□□□ -1.52
SSBP3-212ENST00000528930 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
SSBP3-212ENST00000528930 FAM104BQ5XKR9 115 aa5.53□□□□□ -1.52
SSBP3-212ENST00000528930 ORMDL3Q8N138 153 aa5.53□□□□□ -1.52
SSBP3-212ENST00000528930 IFI27L1Q96BM0 104 aa5.53□□□□□ -1.52
SSBP3-212ENST00000528930 RPL39LQ96EH5 51 aaKnown RBP5.53□□□□□ -1.52
SSBP3-212ENST00000528930 PRR34Q9NV39 138 aa5.53□□□□□ -1.52
SSBP3-212ENST00000528930 A0A096LNJ9 63 aa5.52□□□□□ -1.53
SSBP3-212ENST00000528930 A0A1B0GUV1 79 aa5.52□□□□□ -1.53
SSBP3-212ENST00000528930 H3BMG7 143 aa5.52□□□□□ -1.53
SSBP3-212ENST00000528930 CKS1BP61024 79 aa5.52□□□□□ -1.53
SSBP3-212ENST00000528930 RPL24P83731 157 aaKnown RBP5.52□□□□□ -1.53
SSBP3-212ENST00000528930 KRTAP26-1Q6PEX3 210 aa5.52□□□□□ -1.53
SSBP3-212ENST00000528930 C20orf203Q8NBC4 194 aa5.52□□□□□ -1.53
SSBP3-212ENST00000528930 RNF185Q96GF1 192 aa5.52□□□□□ -1.53
SSBP3-212ENST00000528930 CYSLTR1Q9Y271 337 aa5.52□□□□□ -1.53
SSBP3-212ENST00000528930 IGLV4-60A0A075B6I1 120 aa5.51□□□□□ -1.53
SSBP3-212ENST00000528930 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.51□□□□□ -1.53
SSBP3-212ENST00000528930 CRPP02741 224 aa5.51□□□□□ -1.53
SSBP3-212ENST00000528930 FCER1GP30273 86 aa5.51□□□□□ -1.53
SSBP3-212ENST00000528930 MIAQ16674 131 aa5.51□□□□□ -1.53
SSBP3-212ENST00000528930 CEND1Q8N111 149 aa5.51□□□□□ -1.53
SSBP3-212ENST00000528930 LINC00269Q8N2A0 174 aa5.51□□□□□ -1.53
SSBP3-212ENST00000528930 LINC01600Q96MT4 127 aa5.51□□□□□ -1.53
SSBP3-212ENST00000528930 TMEM243Q9BU79 118 aa5.51□□□□□ -1.53
SSBP3-212ENST00000528930 C1orf43Q9BWL3 253 aa5.51□□□□□ -1.53
SSBP3-212ENST00000528930 SPANXDQ9BXN6 97 aa5.51□□□□□ -1.53
SSBP3-212ENST00000528930 NXT2Q9NPJ8 142 aaKnown RBP5.51□□□□□ -1.53
SSBP3-212ENST00000528930 FAM30AQ9NZY2 134 aa5.51□□□□□ -1.53
SSBP3-212ENST00000528930 PRO0461Q9UI25 63 aa5.51□□□□□ -1.53
SSBP3-212ENST00000528930 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.5□□□□□ -1.53
SSBP3-212ENST00000528930 TRBV6-5A0A0K0K1A5 114 aa5.5□□□□□ -1.53
SSBP3-212ENST00000528930 SDHAF1A6NFY7 115 aa5.5□□□□□ -1.53
SSBP3-212ENST00000528930 LYRM7Q5U5X0 104 aa5.5□□□□□ -1.53
SSBP3-212ENST00000528930 CLPSL2Q6UWE3 100 aa5.5□□□□□ -1.53
SSBP3-212ENST00000528930 PRELID3AQ96N28 172 aa5.5□□□□□ -1.53
SSBP3-212ENST00000528930 K7EMI3 77 aa5.49□□□□□ -1.53
SSBP3-212ENST00000528930 NCR2O95944 276 aa5.49□□□□□ -1.53
SSBP3-212ENST00000528930 POLR2KP53803 58 aaKnown RBP5.49□□□□□ -1.53
SSBP3-212ENST00000528930 REG3AQ06141 175 aa5.49□□□□□ -1.53
SSBP3-212ENST00000528930 SMAGPQ0VAQ4 97 aa5.49□□□□□ -1.53
SSBP3-212ENST00000528930 AMN1Q8IY45 258 aa5.49□□□□□ -1.53
SSBP3-212ENST00000528930 CHAC1Q9BUX1 264 aa5.49□□□□□ -1.53
SSBP3-212ENST00000528930 TRAV12-1A0A0B4J245 112 aa5.48□□□□□ -1.53
SSBP3-212ENST00000528930 LINC01549A6NIU2 74 aa5.48□□□□□ -1.53
SSBP3-212ENST00000528930 I3L3M4 83 aa5.48□□□□□ -1.53
SSBP3-212ENST00000528930 UBE2L6O14933 153 aa5.48□□□□□ -1.53
SSBP3-212ENST00000528930 DPM2O94777 84 aa5.48□□□□□ -1.53
SSBP3-212ENST00000528930 IFI27P40305 119 aaPredicted RBP5.48□□□□□ -1.53
SSBP3-212ENST00000528930 ODF1Q14990 250 aa5.48□□□□□ -1.53
SSBP3-212ENST00000528930 LINC01620Q4KN68 170 aa5.48□□□□□ -1.53
SSBP3-212ENST00000528930 Q6ZSA8 131 aa5.48□□□□□ -1.53
SSBP3-212ENST00000528930 GEMIN7Q9H840 131 aaKnown RBP5.48□□□□□ -1.53
SSBP3-212ENST00000528930 IGLV10-54A0A075B6I4 117 aa5.47□□□□□ -1.53
SSBP3-212ENST00000528930 TRBV20-1A0A075B6N2 111 aa5.47□□□□□ -1.53
SSBP3-212ENST00000528930 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.47□□□□□ -1.53
SSBP3-212ENST00000528930 TRAV8-4A0A0B4J246 113 aa5.47□□□□□ -1.53
SSBP3-212ENST00000528930 IGKV2-29A2NJV5 120 aaPredicted RBP5.47□□□□□ -1.53
SSBP3-212ENST00000528930 USP17L23D6RBM5 183 aa5.47□□□□□ -1.53
SSBP3-212ENST00000528930 H0Y8G0 127 aa5.47□□□□□ -1.53
SSBP3-212ENST00000528930 SMKR1H3BMG3 65 aa5.47□□□□□ -1.53
SSBP3-212ENST00000528930 H7C423 109 aa5.47□□□□□ -1.53
SSBP3-212ENST00000528930 IGKCP01834 107 aa5.47□□□□□ -1.53
SSBP3-212ENST00000528930 PRSS1P07477 247 aa5.47□□□□□ -1.53
SSBP3-212ENST00000528930 PLNP26678 52 aa5.47□□□□□ -1.53
SSBP3-212ENST00000528930 FOXI1Q12951 378 aa5.47□□□□□ -1.53
SSBP3-212ENST00000528930 CFAP161Q6P656 301 aa5.47□□□□□ -1.53
SSBP3-212ENST00000528930 Q6Q795 121 aa5.47□□□□□ -1.53
SSBP3-212ENST00000528930 NRACQ8N912 160 aa5.47□□□□□ -1.53
SSBP3-212ENST00000528930 MAP1LC3AQ9H492 121 aa5.47□□□□□ -1.53
SSBP3-212ENST00000528930 ERG28Q9UKR5 140 aa5.47□□□□□ -1.53
SSBP3-212ENST00000528930 TRBV27A0A0K0K1C4 114 aa5.46□□□□□ -1.54
SSBP3-212ENST00000528930 D6R8Y8 96 aa5.46□□□□□ -1.54
SSBP3-212ENST00000528930 TSHBP01222 138 aa5.46□□□□□ -1.54
SSBP3-212ENST00000528930 FXYD2P54710 66 aa5.46□□□□□ -1.54
SSBP3-212ENST00000528930 MRPL51Q4U2R6 128 aaKnown RBP5.46□□□□□ -1.54
SSBP3-212ENST00000528930 C14orf177Q52M58 125 aa5.46□□□□□ -1.54
SSBP3-212ENST00000528930 PCP2Q8IVA1 136 aa5.46□□□□□ -1.54
SSBP3-212ENST00000528930 Q8N8P6 123 aa5.46□□□□□ -1.54
SSBP3-212ENST00000528930 PPDPFLQ8WWR9 84 aa5.46□□□□□ -1.54
SSBP3-212ENST00000528930 LPAP08519 4548 aa5.46□□□□□ -1.54
SSBP3-212ENST00000528930 CKS2P33552 79 aa5.45□□□□□ -1.54
SSBP3-212ENST00000528930 RAB37Q96AX2 223 aa5.45□□□□□ -1.54
SSBP3-212ENST00000528930 CDIP1Q9H305 208 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms